RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 RASA1P20936 1047 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 PTK7Q13308 1070 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 SLFNL1Q499Z3 407 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 PHTF2Q8N3S3 785 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 TLL1O43897 1013 aa7.46□□□□□ -1.21
CDK13-203ENST00000465643 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.21
CDK13-203ENST00000465643 FAM69CQ0P6D2 419 aa7.46□□□□□ -1.21
CDK13-203ENST00000465643 RNF135Q8IUD6 432 aa7.46□□□□□ -1.21
CDK13-203ENST00000465643 PLPP7Q8NBV4 271 aa7.46□□□□□ -1.21
CDK13-203ENST00000465643 WNT2BQ93097 391 aa7.46□□□□□ -1.21
CDK13-203ENST00000465643 SPSB2Q99619 263 aa7.46□□□□□ -1.21
CDK13-203ENST00000465643 ZC3H4Q9UPT8 1303 aaKnown RBP7.46□□□□□ -1.22
CDK13-203ENST00000465643 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
CDK13-203ENST00000465643 ADAM32Q8TC27 787 aa7.46□□□□□ -1.22
CDK13-203ENST00000465643 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
CDK13-203ENST00000465643 PTK2Q05397 1052 aa7.45□□□□□ -1.22
CDK13-203ENST00000465643 PTCRAQ6ISU1 281 aaPredicted RBP7.45□□□□□ -1.22
CDK13-203ENST00000465643 FAM163AQ96GL9 167 aaPredicted RBP7.45□□□□□ -1.22
CDK13-203ENST00000465643 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
CDK13-203ENST00000465643 PDXDC2PQ6P474 469 aa7.45□□□□□ -1.22
CDK13-203ENST00000465643 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
CDK13-203ENST00000465643 ZNF594Q96JF6 807 aaPredicted RBP7.45□□□□□ -1.22
CDK13-203ENST00000465643 CLDN10P78369 228 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 NESP48681 1621 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 CADPSQ9ULU8 1353 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 SSFA2P28290 1259 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 MMP16P51512 607 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 LHX8Q68G74 356 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
CDK13-203ENST00000465643 LARP1Q6PKG0 1096 aaKnown RBP7.43□□□□□ -1.22
CDK13-203ENST00000465643 TRAF7Q6Q0C0 670 aa7.43□□□□□ -1.22
CDK13-203ENST00000465643 CARD14Q9BXL6 1004 aa7.43□□□□□ -1.22
CDK13-203ENST00000465643 DPYDQ12882 1025 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 OGFOD1Q8N543 542 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 FAM200AQ8TCP9 573 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 SERPINB4P48594 390 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 ANKMY2Q8IV38 441 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 CCDC24Q8N4L8 307 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
CDK13-203ENST00000465643 GPSM3Q9Y4H4 160 aa7.42□□□□□ -1.22
CDK13-203ENST00000465643 LAMC3Q9Y6N6 1575 aa7.41□□□□□ -1.22
CDK13-203ENST00000465643 LGR5O75473 907 aa7.41□□□□□ -1.22
CDK13-203ENST00000465643 UNC93B1Q9H1C4 597 aa7.41□□□□□ -1.22
CDK13-203ENST00000465643 MAGEB6P1A0A0J9YX57 407 aa7.41□□□□□ -1.22
CDK13-203ENST00000465643 ATP5J2-PTCD1G3V325 749 aa7.4□□□□□ -1.22
CDK13-203ENST00000465643 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
CDK13-203ENST00000465643 NBPF14Q5TI25 921 aa7.4□□□□□ -1.22
CDK13-203ENST00000465643 SH3BP5LQ7L8J4 393 aa7.4□□□□□ -1.22
CDK13-203ENST00000465643 ZBTB33Q86T24 672 aa7.4□□□□□ -1.22
CDK13-203ENST00000465643 ARMC2Q8NEN0 867 aa7.4□□□□□ -1.22
CDK13-203ENST00000465643 CCER1Q8TC90 406 aaPredicted RBP7.4□□□□□ -1.22
CDK13-203ENST00000465643 CHIC2Q9UKJ5 165 aa7.4□□□□□ -1.22
CDK13-203ENST00000465643 B4GALNT3Q6L9W6 998 aa7.4□□□□□ -1.23
CDK13-203ENST00000465643 CFTRP13569 1480 aa7.4□□□□□ -1.23
CDK13-203ENST00000465643 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
CDK13-203ENST00000465643 ERCC6Q03468 1493 aa7.39□□□□□ -1.23
CDK13-203ENST00000465643 EML3Q32P44 896 aa7.39□□□□□ -1.23
CDK13-203ENST00000465643 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
CDK13-203ENST00000465643 GIGYF1O75420 1035 aaPredicted RBP7.39□□□□□ -1.23
CDK13-203ENST00000465643 DKK1O94907 266 aa7.39□□□□□ -1.23
CDK13-203ENST00000465643 OXLD1Q5BKU9 147 aa7.39□□□□□ -1.23
CDK13-203ENST00000465643 NOM1Q5C9Z4 860 aaKnown RBP7.39□□□□□ -1.23
CDK13-203ENST00000465643 GPKOWQ92917 476 aaPredicted RBP eCLIP7.39□□□□□ -1.23
CDK13-203ENST00000465643 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
CDK13-203ENST00000465643 PDS5BQ9NTI5 1447 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 UNCXA6NJT0 531 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 E9PSI1 815 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 DZIP3Q86Y13 1208 aaKnown RBP7.38□□□□□ -1.23
CDK13-203ENST00000465643 ZBTB7BO15156 539 aaPredicted RBP7.38□□□□□ -1.23
CDK13-203ENST00000465643 PRMT3O60678 531 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 ARID4AP29374 1257 aaPredicted RBP7.38□□□□□ -1.23
CDK13-203ENST00000465643 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 ZNF516Q92618 1163 aa7.38□□□□□ -1.23
CDK13-203ENST00000465643 DNAAF2Q9NVR5 837 aaKnown RBP7.38□□□□□ -1.23
CDK13-203ENST00000465643 ZPR1O75312 459 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 BAP1Q92560 729 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 FOXJ1Q92949 421 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 DOLKQ9UPQ8 538 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 ADH1BP00325 375 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 MAP7D1Q3KQU3 841 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
CDK13-203ENST00000465643 SFI1A8K8P3 1242 aa7.36□□□□□ -1.23
CDK13-203ENST00000465643 THSD4Q6ZMP0 1018 aa7.36□□□□□ -1.23
CDK13-203ENST00000465643 PRIMPOLQ96LW4 560 aa7.36□□□□□ -1.23
CDK13-203ENST00000465643 MTRQ99707 1265 aa7.36□□□□□ -1.23
CDK13-203ENST00000465643 AMOTL2Q9Y2J4 779 aa7.36□□□□□ -1.23
CDK13-203ENST00000465643 FANCD2Q9BXW9 1451 aa7.36□□□□□ -1.23
CDK13-203ENST00000465643 SOWAHDA6NJG2 315 aa7.35□□□□□ -1.23
CDK13-203ENST00000465643 ERFEQ4G0M1 354 aa7.35□□□□□ -1.23
CDK13-203ENST00000465643 NOD1Q9Y239 953 aa7.35□□□□□ -1.23
CDK13-203ENST00000465643 DNAJC14Q6Y2X3 702 aaPredicted RBP7.35□□□□□ -1.23
CDK13-203ENST00000465643 GAS2L2Q8NHY3 880 aa7.35□□□□□ -1.23
CDK13-203ENST00000465643 KCTD12Q96CX2 325 aaKnown RBP7.35□□□□□ -1.23
CDK13-203ENST00000465643 LZTS3O60299 673 aaPredicted RBP7.34□□□□□ -1.23
CDK13-203ENST00000465643 MCCD1P59942 119 aaPredicted RBP7.34□□□□□ -1.23
CDK13-203ENST00000465643 GTF2IP78347 998 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms