RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 UNC5CLQ8IV45 518 aa13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 ZNF692Q9BU19 519 aaPredicted RBP13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 BTG4Q9NY30 223 aa13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
CTNNB1-211ENST00000465552 NINLQ9Y2I6 1382 aa13.87□□□□□ -0.19
CTNNB1-211ENST00000465552 NME9Q86XW9 330 aa13.87□□□□□ -0.19
CTNNB1-211ENST00000465552 ANKRD36BQ8N2N9 1353 aa13.86□□□□□ -0.19
CTNNB1-211ENST00000465552 THSD7AQ9UPZ6 1657 aa13.86□□□□□ -0.19
CTNNB1-211ENST00000465552 TERF2IPQ9NYB0 399 aa13.86□□□□□ -0.19
CTNNB1-211ENST00000465552 GCP02774 474 aa13.85□□□□□ -0.19
CTNNB1-211ENST00000465552 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
CTNNB1-211ENST00000465552 OVOS2A0A0J9YW53 1432 aa13.84□□□□□ -0.19
CTNNB1-211ENST00000465552 OVOS2Q6IE36 1432 aa13.84□□□□□ -0.19
CTNNB1-211ENST00000465552 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
CTNNB1-211ENST00000465552 GJD4Q96KN9 370 aaPredicted RBP13.84□□□□□ -0.19
CTNNB1-211ENST00000465552 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
CTNNB1-211ENST00000465552 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
CTNNB1-211ENST00000465552 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
CTNNB1-211ENST00000465552 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
CTNNB1-211ENST00000465552 PARP4Q9UKK3 1724 aaKnown RBP13.83□□□□□ -0.2
CTNNB1-211ENST00000465552 CPDO75976 1380 aa13.83□□□□□ -0.2
CTNNB1-211ENST00000465552 PEAK1Q9H792 1746 aa13.82□□□□□ -0.2
CTNNB1-211ENST00000465552 VPS72Q15906 364 aa13.82□□□□□ -0.2
CTNNB1-211ENST00000465552 CDCA8Q53HL2 280 aa13.82□□□□□ -0.2
CTNNB1-211ENST00000465552 LRRC37A3O60309 1634 aa13.82□□□□□ -0.2
CTNNB1-211ENST00000465552 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
CTNNB1-211ENST00000465552 A0A0G2JS52 829 aa13.81□□□□□ -0.2
CTNNB1-211ENST00000465552 MYT1Q01538 1121 aa13.81□□□□□ -0.2
CTNNB1-211ENST00000465552 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
CTNNB1-211ENST00000465552 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
CTNNB1-211ENST00000465552 ABCC6O95255 1503 aa13.8□□□□□ -0.2
CTNNB1-211ENST00000465552 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
CTNNB1-211ENST00000465552 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
CTNNB1-211ENST00000465552 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
CTNNB1-211ENST00000465552 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CTNNB1-211ENST00000465552 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
CTNNB1-211ENST00000465552 EVA1CP58658 441 aa13.78□□□□□ -0.2
CTNNB1-211ENST00000465552 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
CTNNB1-211ENST00000465552 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
CTNNB1-211ENST00000465552 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
CTNNB1-211ENST00000465552 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
CTNNB1-211ENST00000465552 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.21
CTNNB1-211ENST00000465552 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
CTNNB1-211ENST00000465552 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
CTNNB1-211ENST00000465552 EP400Q96L91 3159 aa13.77□□□□□ -0.21
CTNNB1-211ENST00000465552 COG3Q96JB2 828 aa13.76□□□□□ -0.21
CTNNB1-211ENST00000465552 CRB1P82279 1406 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 SPATA31A1Q5TZJ5 1347 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 FBLN1P23142 703 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 AXIN2Q9Y2T1 843 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
CTNNB1-211ENST00000465552 KIF7Q2M1P5 1343 aa13.74□□□□□ -0.21
CTNNB1-211ENST00000465552 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
CTNNB1-211ENST00000465552 FYB1O15117 783 aa13.73□□□□□ -0.21
CTNNB1-211ENST00000465552 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
CTNNB1-211ENST00000465552 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
CTNNB1-211ENST00000465552 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTNNB1-211ENST00000465552 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.21
CTNNB1-211ENST00000465552 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.21
CTNNB1-211ENST00000465552 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
CTNNB1-211ENST00000465552 PANK3Q9H999 370 aa13.71□□□□□ -0.21
CTNNB1-211ENST00000465552 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.22
CTNNB1-211ENST00000465552 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
CTNNB1-211ENST00000465552 KRT27Q7Z3Y8 459 aa13.7□□□□□ -0.22
CTNNB1-211ENST00000465552 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
CTNNB1-211ENST00000465552 MAP3K19Q56UN5 1328 aa13.69□□□□□ -0.22
CTNNB1-211ENST00000465552 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
CTNNB1-211ENST00000465552 BLMP54132 1417 aaPredicted RBP13.69□□□□□ -0.22
CTNNB1-211ENST00000465552 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
CTNNB1-211ENST00000465552 ERBB3P21860 1342 aa13.68□□□□□ -0.22
CTNNB1-211ENST00000465552 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
CTNNB1-211ENST00000465552 DOT1LQ8TEK3 1739 aa13.68□□□□□ -0.22
CTNNB1-211ENST00000465552 ANKRD24Q8TF21 1146 aa13.68□□□□□ -0.22
CTNNB1-211ENST00000465552 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
CTNNB1-211ENST00000465552 TNNT2P45379 298 aaPredicted RBP13.67□□□□□ -0.22
CTNNB1-211ENST00000465552 AMPHP49418 695 aa13.67□□□□□ -0.22
CTNNB1-211ENST00000465552 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
CTNNB1-211ENST00000465552 RTL1A6NKG5 1358 aa13.67□□□□□ -0.22
CTNNB1-211ENST00000465552 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
CTNNB1-211ENST00000465552 HOXC9P31274 260 aa13.66□□□□□ -0.22
CTNNB1-211ENST00000465552 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
CTNNB1-211ENST00000465552 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
CTNNB1-211ENST00000465552 DISP2A7MBM2 1401 aa13.65□□□□□ -0.22
CTNNB1-211ENST00000465552 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
CTNNB1-211ENST00000465552 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
CTNNB1-211ENST00000465552 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
CTNNB1-211ENST00000465552 RREB1Q92766 1687 aa13.65□□□□□ -0.22
CTNNB1-211ENST00000465552 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 BTAF1O14981 1849 aa13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 FLT4P35916 1363 aa13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 IP6K1Q92551 441 aa13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 ITGB4P16144 1822 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms