RNA–Protein interactions for RNA: ENST00000465528.1

NOTCH4-202, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-202ENST00000465528 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
NOTCH4-202ENST00000465528 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
NOTCH4-202ENST00000465528 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
NOTCH4-202ENST00000465528 LRRC37A3O60309 1634 aa18.38■□□□□ 0.53
NOTCH4-202ENST00000465528 SOX12O15370 315 aa18.37■□□□□ 0.53
NOTCH4-202ENST00000465528 KCNQ2O43526 872 aa18.37■□□□□ 0.53
NOTCH4-202ENST00000465528 BCL11BQ9C0K0 894 aaPredicted RBP18.37■□□□□ 0.53
NOTCH4-202ENST00000465528 SPON1Q9HCB6 807 aa18.37■□□□□ 0.53
NOTCH4-202ENST00000465528 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
NOTCH4-202ENST00000465528 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
NOTCH4-202ENST00000465528 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
NOTCH4-202ENST00000465528 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
NOTCH4-202ENST00000465528 KCNH5Q8NCM2 988 aa18.35■□□□□ 0.53
NOTCH4-202ENST00000465528 CARD10Q9BWT7 1032 aa18.35■□□□□ 0.53
NOTCH4-202ENST00000465528 BCL9O00512 1426 aa18.34■□□□□ 0.53
NOTCH4-202ENST00000465528 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
NOTCH4-202ENST00000465528 CDCA7Q9BWT1 371 aaPredicted RBP18.34■□□□□ 0.53
NOTCH4-202ENST00000465528 PDGFDQ9GZP0 370 aaPredicted RBP18.34■□□□□ 0.53
NOTCH4-202ENST00000465528 CSB-PGBD3P0DP91 1061 aa18.33■□□□□ 0.52
NOTCH4-202ENST00000465528 RGPD5Q99666 1765 aa18.32■□□□□ 0.52
NOTCH4-202ENST00000465528 NFAT5O94916 1531 aa18.32■□□□□ 0.52
NOTCH4-202ENST00000465528 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
NOTCH4-202ENST00000465528 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
NOTCH4-202ENST00000465528 PPP1R1BQ9UD71 204 aaPredicted RBP18.31■□□□□ 0.52
NOTCH4-202ENST00000465528 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
NOTCH4-202ENST00000465528 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
NOTCH4-202ENST00000465528 EXOC5O00471 708 aa18.3■□□□□ 0.52
NOTCH4-202ENST00000465528 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
NOTCH4-202ENST00000465528 YY1P25490 414 aa18.29■□□□□ 0.52
NOTCH4-202ENST00000465528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
NOTCH4-202ENST00000465528 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
NOTCH4-202ENST00000465528 NME9Q86XW9 330 aa18.27■□□□□ 0.52
NOTCH4-202ENST00000465528 USP31Q70CQ4 1352 aa18.27■□□□□ 0.51
NOTCH4-202ENST00000465528 CCDC7Q96M83 1385 aa18.27■□□□□ 0.51
NOTCH4-202ENST00000465528 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.51
NOTCH4-202ENST00000465528 CASZ1Q86V15 1759 aa18.27■□□□□ 0.51
NOTCH4-202ENST00000465528 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
NOTCH4-202ENST00000465528 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
NOTCH4-202ENST00000465528 SBNO2Q9Y2G9 1366 aa18.26■□□□□ 0.51
NOTCH4-202ENST00000465528 PTGER2P43116 358 aa18.25■□□□□ 0.51
NOTCH4-202ENST00000465528 ERBB3P21860 1342 aa18.24■□□□□ 0.51
NOTCH4-202ENST00000465528 TNS2Q63HR2 1409 aa18.24■□□□□ 0.51
NOTCH4-202ENST00000465528 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
NOTCH4-202ENST00000465528 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
NOTCH4-202ENST00000465528 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
NOTCH4-202ENST00000465528 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
NOTCH4-202ENST00000465528 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
NOTCH4-202ENST00000465528 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
NOTCH4-202ENST00000465528 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
NOTCH4-202ENST00000465528 ABCC6O95255 1503 aa18.23■□□□□ 0.51
NOTCH4-202ENST00000465528 STK32BQ9NY57 414 aa18.22■□□□□ 0.51
NOTCH4-202ENST00000465528 TMC1Q8TDI8 760 aa18.21■□□□□ 0.51
NOTCH4-202ENST00000465528 IL2RBP14784 551 aa18.2■□□□□ 0.5
NOTCH4-202ENST00000465528 ANKRD24Q8TF21 1146 aa18.2■□□□□ 0.5
NOTCH4-202ENST00000465528 UTRNP46939 3433 aa18.19■□□□□ 0.5
NOTCH4-202ENST00000465528 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
NOTCH4-202ENST00000465528 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
NOTCH4-202ENST00000465528 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
NOTCH4-202ENST00000465528 EDC4Q6P2E9 1401 aaKnown RBP18.17■□□□□ 0.5
NOTCH4-202ENST00000465528 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
NOTCH4-202ENST00000465528 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
NOTCH4-202ENST00000465528 MYOM1P52179 1685 aa18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 NHSQ6T4R5 1651 aa18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 FHDC1Q9C0D6 1143 aaPredicted RBP18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 MTFR1LQ9H019 292 aa18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 KAT6BQ8WYB5 2073 aa18.16■□□□□ 0.5
NOTCH4-202ENST00000465528 LTN1O94822 1766 aa18.14■□□□□ 0.5
NOTCH4-202ENST00000465528 ZNF827Q17R98 1081 aa18.14■□□□□ 0.49
NOTCH4-202ENST00000465528 IP6K1Q92551 441 aa18.14■□□□□ 0.49
NOTCH4-202ENST00000465528 PUS7Q96PZ0 661 aaKnown RBP18.14■□□□□ 0.49
NOTCH4-202ENST00000465528 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.49
NOTCH4-202ENST00000465528 FBLN1P23142 703 aa18.13■□□□□ 0.49
NOTCH4-202ENST00000465528 TESK2Q96S53 571 aa18.13■□□□□ 0.49
NOTCH4-202ENST00000465528 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
NOTCH4-202ENST00000465528 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
NOTCH4-202ENST00000465528 BTAF1O14981 1849 aa18.11■□□□□ 0.49
NOTCH4-202ENST00000465528 DDX54Q8TDD1 881 aaKnown RBP18.1■□□□□ 0.49
NOTCH4-202ENST00000465528 MAP3K19Q56UN5 1328 aa18.09■□□□□ 0.49
NOTCH4-202ENST00000465528 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
NOTCH4-202ENST00000465528 TONSLQ96HA7 1378 aa18.08■□□□□ 0.49
NOTCH4-202ENST00000465528 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.48
NOTCH4-202ENST00000465528 KCNQ4P56696 695 aa18.08■□□□□ 0.48
NOTCH4-202ENST00000465528 ARXQ96QS3 562 aa18.08■□□□□ 0.48
NOTCH4-202ENST00000465528 HOXC9P31274 260 aa18.07■□□□□ 0.48
NOTCH4-202ENST00000465528 ZNF784Q8NCA9 323 aaPredicted RBP18.07■□□□□ 0.48
NOTCH4-202ENST00000465528 PRIM1P49642 420 aaKnown RBP18.06■□□□□ 0.48
NOTCH4-202ENST00000465528 COG3Q96JB2 828 aa18.06■□□□□ 0.48
NOTCH4-202ENST00000465528 PNPLA7Q6ZV29 1317 aa18.04■□□□□ 0.48
NOTCH4-202ENST00000465528 SLC27A3Q5K4L6 730 aa18.04■□□□□ 0.48
NOTCH4-202ENST00000465528 NSD2O96028 1365 aa18.04■□□□□ 0.48
NOTCH4-202ENST00000465528 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
NOTCH4-202ENST00000465528 AMPHP49418 695 aa18.03■□□□□ 0.48
NOTCH4-202ENST00000465528 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
NOTCH4-202ENST00000465528 SYTL4Q96C24 671 aaPredicted RBP18.03■□□□□ 0.48
NOTCH4-202ENST00000465528 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
NOTCH4-202ENST00000465528 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.48
NOTCH4-202ENST00000465528 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
NOTCH4-202ENST00000465528 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms