RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 AHDC1Q5TGY3 1603 aaPredicted RBP28.79■■■□□ 2.2
ITGA4-204ENST00000465522 ZBED9Q6R2W3 1325 aa28.78■■■□□ 2.2
ITGA4-204ENST00000465522 IP6K1Q92551 441 aa28.78■■■□□ 2.2
ITGA4-204ENST00000465522 RTL1A6NKG5 1358 aa28.78■■■□□ 2.2
ITGA4-204ENST00000465522 ZC3H6P61129 1189 aaKnown RBP28.77■■■□□ 2.2
ITGA4-204ENST00000465522 RUNDC1Q96C34 613 aa28.77■■■□□ 2.2
ITGA4-204ENST00000465522 PNNQ9H307 717 aaKnown RBP28.76■■■□□ 2.19
ITGA4-204ENST00000465522 PHRF1Q9P1Y6 1649 aaKnown RBP28.75■■■□□ 2.19
ITGA4-204ENST00000465522 FCHSD2O94868 740 aa28.74■■■□□ 2.19
ITGA4-204ENST00000465522 SALL2Q9Y467 1007 aaPredicted RBP28.74■■■□□ 2.19
ITGA4-204ENST00000465522 CRYBG1Q9Y4K1 1723 aa28.73■■■□□ 2.19
ITGA4-204ENST00000465522 APAF1O14727 1248 aa28.72■■■□□ 2.19
ITGA4-204ENST00000465522 HAP1P54257 671 aaPredicted RBP28.72■■■□□ 2.19
ITGA4-204ENST00000465522 HMOX1P09601 288 aa28.72■■■□□ 2.19
ITGA4-204ENST00000465522 PHLPP1O60346 1717 aa28.71■■■□□ 2.19
ITGA4-204ENST00000465522 LTV1Q96GA3 475 aaPredicted RBP28.7■■■□□ 2.19
ITGA4-204ENST00000465522 PLEKHF1Q96S99 279 aa28.69■■■□□ 2.18
ITGA4-204ENST00000465522 RSPH6AQ9H0K4 717 aa28.69■■■□□ 2.18
ITGA4-204ENST00000465522 NEFMP07197 916 aa28.67■■■□□ 2.18
ITGA4-204ENST00000465522 TCP11L2Q8N4U5 519 aa28.67■■■□□ 2.18
ITGA4-204ENST00000465522 PRKAR2BP31323 418 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 SULT6B1Q6IMI4 303 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 EYA1Q99502 592 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 MAPK8IP3Q9UPT6 1336 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 CPDO75976 1380 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 AXIN2Q9Y2T1 843 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 KIAA0232Q92628 1395 aa28.66■■■□□ 2.18
ITGA4-204ENST00000465522 NGEFQ8N5V2 710 aa28.65■■■□□ 2.18
ITGA4-204ENST00000465522 RGPD1P0DJD0 1748 aa28.64■■■□□ 2.17
ITGA4-204ENST00000465522 COL16A1Q07092 1604 aaPredicted RBP28.64■■■□□ 2.17
ITGA4-204ENST00000465522 CHRNA2Q15822 529 aa28.63■■■□□ 2.17
ITGA4-204ENST00000465522 ABCA3Q99758 1704 aa28.62■■■□□ 2.17
ITGA4-204ENST00000465522 IGSF1Q8N6C5 1336 aa28.62■■■□□ 2.17
ITGA4-204ENST00000465522 NEUROD2Q15784 382 aa28.62■■■□□ 2.17
ITGA4-204ENST00000465522 AEBP1Q8IUX7 1158 aa28.62■■■□□ 2.17
ITGA4-204ENST00000465522 PRDM11Q9NQV5 511 aa28.62■■■□□ 2.17
ITGA4-204ENST00000465522 RGPD5Q99666 1765 aa28.62■■■□□ 2.17
ITGA4-204ENST00000465522 ANKRD24Q8TF21 1146 aa28.61■■■□□ 2.17
ITGA4-204ENST00000465522 RRP7AQ9Y3A4 280 aaKnown RBP28.6■■■□□ 2.17
ITGA4-204ENST00000465522 COL18A1P39060 1754 aa28.59■■■□□ 2.17
ITGA4-204ENST00000465522 PHACTR3Q96KR7 559 aa28.58■■■□□ 2.17
ITGA4-204ENST00000465522 COL22A1Q8NFW1 1626 aaPredicted RBP28.58■■■□□ 2.17
ITGA4-204ENST00000465522 ABCC6O95255 1503 aa28.57■■■□□ 2.16
ITGA4-204ENST00000465522 TMPOP42166 694 aaKnown RBP28.57■■■□□ 2.16
ITGA4-204ENST00000465522 NBPF6Q5VWK0 638 aa28.57■■■□□ 2.16
ITGA4-204ENST00000465522 NBPF4Q96M43 638 aa28.57■■■□□ 2.16
ITGA4-204ENST00000465522 PDE3BQ13370 1112 aa28.56■■■□□ 2.16
ITGA4-204ENST00000465522 KDRP35968 1356 aa28.56■■■□□ 2.16
ITGA4-204ENST00000465522 ERBB3P21860 1342 aa28.56■■■□□ 2.16
ITGA4-204ENST00000465522 NCBP3Q53F19 620 aaKnown RBP28.55■■■□□ 2.16
ITGA4-204ENST00000465522 USHBP1Q8N6Y0 703 aa28.53■■■□□ 2.16
ITGA4-204ENST00000465522 ZNF521Q96K83 1311 aa28.53■■■□□ 2.16
ITGA4-204ENST00000465522 RGPD2P0DJD1 1756 aa28.53■■■□□ 2.16
ITGA4-204ENST00000465522 RIPK4P57078 832 aa28.52■■■□□ 2.16
ITGA4-204ENST00000465522 CCDC27Q2M243 656 aa28.52■■■□□ 2.16
ITGA4-204ENST00000465522 WWC1Q8IX03 1113 aa28.52■■■□□ 2.16
ITGA4-204ENST00000465522 FAM83GA6ND36 823 aa28.52■■■□□ 2.16
ITGA4-204ENST00000465522 CSB-PGBD3P0DP91 1061 aa28.52■■■□□ 2.16
ITGA4-204ENST00000465522 NFE2L2Q16236 605 aa28.51■■■□□ 2.15
ITGA4-204ENST00000465522 GOLGA2Q08379 1002 aa28.5■■■□□ 2.15
ITGA4-204ENST00000465522 CDCA7LQ96GN5 454 aa28.49■■■□□ 2.15
ITGA4-204ENST00000465522 PHF23Q9BUL5 403 aaPredicted RBP28.49■■■□□ 2.15
ITGA4-204ENST00000465522 NLRP2Q9NX02 1062 aa28.49■■■□□ 2.15
ITGA4-204ENST00000465522 CAMTA1Q9Y6Y1 1673 aa28.47■■■□□ 2.15
ITGA4-204ENST00000465522 LMO7Q8WWI1 1683 aa28.46■■■□□ 2.15
ITGA4-204ENST00000465522 JCADQ9P266 1359 aa28.46■■■□□ 2.15
ITGA4-204ENST00000465522 TRIM35Q9UPQ4 493 aa28.46■■■□□ 2.15
ITGA4-204ENST00000465522 NUTM2BA6NNL0 878 aaPredicted RBP28.45■■■□□ 2.14
ITGA4-204ENST00000465522 NUTM2EB1AL46 878 aaPredicted RBP28.45■■■□□ 2.14
ITGA4-204ENST00000465522 NUTM2AQ8IVF1 878 aaPredicted RBP28.45■■■□□ 2.14
ITGA4-204ENST00000465522 EVA1CP58658 441 aa28.44■■■□□ 2.14
ITGA4-204ENST00000465522 WDR63Q8IWG1 891 aa28.44■■■□□ 2.14
ITGA4-204ENST00000465522 FAM208AQ9UK61 1670 aaKnown RBP28.43■■■□□ 2.14
ITGA4-204ENST00000465522 ADAMTS2O95450 1211 aa28.43■■■□□ 2.14
ITGA4-204ENST00000465522 NCAPD2Q15021 1401 aa28.42■■■□□ 2.14
ITGA4-204ENST00000465522 WDR17Q8IZU2 1322 aa28.42■■■□□ 2.14
ITGA4-204ENST00000465522 DLG5Q8TDM6 1919 aa28.41■■■□□ 2.14
ITGA4-204ENST00000465522 COL5A2P05997 1499 aaPredicted RBP28.41■■■□□ 2.14
ITGA4-204ENST00000465522 HSPA1LP34931 641 aa28.41■■■□□ 2.14
ITGA4-204ENST00000465522 MTHFSDQ2M296 383 aaKnown RBP28.41■■■□□ 2.14
ITGA4-204ENST00000465522 BTG4Q9NY30 223 aa28.41■■■□□ 2.14
ITGA4-204ENST00000465522 COL14A1Q05707 1796 aaKnown RBP28.41■■■□□ 2.14
ITGA4-204ENST00000465522 SLFN5Q08AF3 891 aa28.4■■■□□ 2.14
ITGA4-204ENST00000465522 LMOD3Q0VAK6 560 aa28.4■■■□□ 2.14
ITGA4-204ENST00000465522 TOM1L2Q6ZVM7 507 aa28.4■■■□□ 2.14
ITGA4-204ENST00000465522 GAS2L2Q8NHY3 880 aa28.4■■■□□ 2.14
ITGA4-204ENST00000465522 STRN4Q9NRL3 753 aa28.4■■■□□ 2.14
ITGA4-204ENST00000465522 E9PSI1 815 aa28.39■■■□□ 2.14
ITGA4-204ENST00000465522 SPINK5Q9NQ38 1064 aaPredicted RBP28.38■■■□□ 2.13
ITGA4-204ENST00000465522 RAPGEF4Q8WZA2 1011 aa28.37■■■□□ 2.13
ITGA4-204ENST00000465522 PLEKHO1Q53GL0 409 aaPredicted RBP28.35■■■□□ 2.13
ITGA4-204ENST00000465522 LARP1Q6PKG0 1096 aaKnown RBP28.35■■■□□ 2.13
ITGA4-204ENST00000465522 AMOTQ4VCS5 1084 aa28.35■■■□□ 2.13
ITGA4-204ENST00000465522 DUSP27Q5VZP5 1158 aa28.35■■■□□ 2.13
ITGA4-204ENST00000465522 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
ITGA4-204ENST00000465522 CARD10Q9BWT7 1032 aa28.34■■■□□ 2.13
ITGA4-204ENST00000465522 SPATA31A6Q5VVP1 1343 aa28.34■■■□□ 2.13
ITGA4-204ENST00000465522 TATP17735 454 aaPredicted RBP28.33■■■□□ 2.13
ITGA4-204ENST00000465522 CALD1Q05682 793 aaKnown RBP28.32■■■□□ 2.12
ITGA4-204ENST00000465522 RTF1Q92541 710 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms