RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 BCL9LQ86UU0 1499 aa25.2■■□□□ 1.62
SCAMP3-204ENST00000465312 CSB-PGBD3P0DP91 1061 aa25.19■■□□□ 1.62
SCAMP3-204ENST00000465312 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-204ENST00000465312 MAP3K19Q56UN5 1328 aa25.18■■□□□ 1.62
SCAMP3-204ENST00000465312 NRAPQ86VF7 1730 aa25.18■■□□□ 1.62
SCAMP3-204ENST00000465312 LMO7Q8WWI1 1683 aa25.18■■□□□ 1.62
SCAMP3-204ENST00000465312 POTEAQ6S8J7 498 aa25.18■■□□□ 1.62
SCAMP3-204ENST00000465312 CAMTA1Q9Y6Y1 1673 aa25.17■■□□□ 1.62
SCAMP3-204ENST00000465312 RGPD5Q99666 1765 aa25.16■■□□□ 1.62
SCAMP3-204ENST00000465312 LTV1Q96GA3 475 aaPredicted RBP25.15■■□□□ 1.62
SCAMP3-204ENST00000465312 ATRNO75882 1429 aa25.14■■□□□ 1.62
SCAMP3-204ENST00000465312 RXRBP28702 533 aa25.14■■□□□ 1.62
SCAMP3-204ENST00000465312 USP35Q9P2H5 1018 aa25.14■■□□□ 1.62
SCAMP3-204ENST00000465312 AXIN2Q9Y2T1 843 aa25.14■■□□□ 1.62
SCAMP3-204ENST00000465312 EMILIN1Q9Y6C2 1016 aa25.14■■□□□ 1.62
SCAMP3-204ENST00000465312 COL5A2P05997 1499 aaPredicted RBP25.14■■□□□ 1.61
SCAMP3-204ENST00000465312 COL18A1P39060 1754 aa25.13■■□□□ 1.61
SCAMP3-204ENST00000465312 A0A0G2JS52 829 aa25.13■■□□□ 1.61
SCAMP3-204ENST00000465312 MYT1Q01538 1121 aa25.13■■□□□ 1.61
SCAMP3-204ENST00000465312 VPS72Q15906 364 aa25.13■■□□□ 1.61
SCAMP3-204ENST00000465312 ABCC6O95255 1503 aa25.12■■□□□ 1.61
SCAMP3-204ENST00000465312 MAP2P11137 1827 aaKnown RBP25.12■■□□□ 1.61
SCAMP3-204ENST00000465312 HOXC9P31274 260 aa25.12■■□□□ 1.61
SCAMP3-204ENST00000465312 TOM1L2Q6ZVM7 507 aa25.12■■□□□ 1.61
SCAMP3-204ENST00000465312 IP6K1Q92551 441 aa25.12■■□□□ 1.61
SCAMP3-204ENST00000465312 RTL1A6NKG5 1358 aa25.11■■□□□ 1.61
SCAMP3-204ENST00000465312 NPC1L1Q9UHC9 1359 aa25.11■■□□□ 1.61
SCAMP3-204ENST00000465312 RBM6P78332 1123 aaKnown RBP25.11■■□□□ 1.61
SCAMP3-204ENST00000465312 LARP1Q6PKG0 1096 aaKnown RBP25.11■■□□□ 1.61
SCAMP3-204ENST00000465312 ANKRD24Q8TF21 1146 aa25.11■■□□□ 1.61
SCAMP3-204ENST00000465312 GJD4Q96KN9 370 aaPredicted RBP25.11■■□□□ 1.61
SCAMP3-204ENST00000465312 FLT4P35916 1363 aa25.1■■□□□ 1.61
SCAMP3-204ENST00000465312 BLMP54132 1417 aaPredicted RBP25.1■■□□□ 1.61
SCAMP3-204ENST00000465312 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
SCAMP3-204ENST00000465312 POLKQ9UBT6 870 aa25.08■■□□□ 1.61
SCAMP3-204ENST00000465312 WDR17Q8IZU2 1322 aa25.08■■□□□ 1.6
SCAMP3-204ENST00000465312 PEAK1Q9H792 1746 aa25.07■■□□□ 1.6
SCAMP3-204ENST00000465312 NLRP2Q9NX02 1062 aa25.07■■□□□ 1.6
SCAMP3-204ENST00000465312 CRB1P82279 1406 aa25.06■■□□□ 1.6
SCAMP3-204ENST00000465312 ERBB3P21860 1342 aa25.06■■□□□ 1.6
SCAMP3-204ENST00000465312 SPATA31A5Q5VU36 1347 aa25.06■■□□□ 1.6
SCAMP3-204ENST00000465312 SPATA31A7Q8IWB4 1347 aa25.06■■□□□ 1.6
SCAMP3-204ENST00000465312 HSP90AB2PQ58FF8 381 aa25.05■■□□□ 1.6
SCAMP3-204ENST00000465312 GLI3P10071 1580 aa25.05■■□□□ 1.6
SCAMP3-204ENST00000465312 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
SCAMP3-204ENST00000465312 FAM98CQ17RN3 349 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-204ENST00000465312 SPATA31A1Q5TZJ5 1347 aa25.04■■□□□ 1.6
SCAMP3-204ENST00000465312 INSRP06213 1382 aa25.02■■□□□ 1.6
SCAMP3-204ENST00000465312 TCP11L2Q8N4U5 519 aa25.01■■□□□ 1.59
SCAMP3-204ENST00000465312 MTHFSP49914 203 aa25■■□□□ 1.59
SCAMP3-204ENST00000465312 FAM208AQ9UK61 1670 aaKnown RBP25■■□□□ 1.59
SCAMP3-204ENST00000465312 CDK12Q9NYV4 1490 aaPredicted RBP24.98■■□□□ 1.59
SCAMP3-204ENST00000465312 RGS12O14924 1447 aa24.98■■□□□ 1.59
SCAMP3-204ENST00000465312 CARD10Q9BWT7 1032 aa24.98■■□□□ 1.59
SCAMP3-204ENST00000465312 THRAP3Q9Y2W1 955 aaKnown RBP24.97■■□□□ 1.59
SCAMP3-204ENST00000465312 ILDR2Q71H61 639 aa24.96■■□□□ 1.59
SCAMP3-204ENST00000465312 SEPT12Q8IYM1 358 aa24.96■■□□□ 1.59
SCAMP3-204ENST00000465312 RGPD2P0DJD1 1756 aa24.95■■□□□ 1.59
SCAMP3-204ENST00000465312 PPP2R1AP30153 589 aa24.95■■□□□ 1.58
SCAMP3-204ENST00000465312 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
SCAMP3-204ENST00000465312 CFAP53Q96M91 514 aa24.95■■□□□ 1.58
SCAMP3-204ENST00000465312 RALBP1Q15311 655 aa24.94■■□□□ 1.58
SCAMP3-204ENST00000465312 PARD3Q8TEW0 1356 aa24.93■■□□□ 1.58
SCAMP3-204ENST00000465312 EIF4A2Q14240 407 aaKnown RBP24.93■■□□□ 1.58
SCAMP3-204ENST00000465312 BARGINQ6ZT62 677 aa24.92■■□□□ 1.58
SCAMP3-204ENST00000465312 NBPF6Q5VWK0 638 aa24.91■■□□□ 1.58
SCAMP3-204ENST00000465312 NBPF4Q96M43 638 aa24.91■■□□□ 1.58
SCAMP3-204ENST00000465312 WNK3Q9BYP7 1800 aa24.9■■□□□ 1.58
SCAMP3-204ENST00000465312 ANP32CO43423 234 aa24.88■■□□□ 1.57
SCAMP3-204ENST00000465312 DIAPH1O60610 1272 aaKnown RBP24.88■■□□□ 1.57
SCAMP3-204ENST00000465312 IL2RBP14784 551 aa24.88■■□□□ 1.57
SCAMP3-204ENST00000465312 RAPGEF4Q8WZA2 1011 aa24.88■■□□□ 1.57
SCAMP3-204ENST00000465312 CDCA7Q9BWT1 371 aaPredicted RBP24.88■■□□□ 1.57
SCAMP3-204ENST00000465312 THSD7AQ9UPZ6 1657 aa24.88■■□□□ 1.57
SCAMP3-204ENST00000465312 PDE3BQ13370 1112 aa24.87■■□□□ 1.57
SCAMP3-204ENST00000465312 DDB1Q16531 1140 aa24.87■■□□□ 1.57
SCAMP3-204ENST00000465312 EYA1Q99502 592 aa24.87■■□□□ 1.57
SCAMP3-204ENST00000465312 MYBBP1AQ9BQG0 1328 aaKnown RBP24.86■■□□□ 1.57
SCAMP3-204ENST00000465312 ONECUT3O60422 494 aaPredicted RBP24.86■■□□□ 1.57
SCAMP3-204ENST00000465312 BRWD3Q6RI45 1802 aa24.86■■□□□ 1.57
SCAMP3-204ENST00000465312 U2SURPO15042 1029 aaKnown RBP24.85■■□□□ 1.57
SCAMP3-204ENST00000465312 KRT27Q7Z3Y8 459 aa24.85■■□□□ 1.57
SCAMP3-204ENST00000465312 PRKRIP1Q9H875 184 aaPredicted RBP24.85■■□□□ 1.57
SCAMP3-204ENST00000465312 TATP17735 454 aaPredicted RBP24.84■■□□□ 1.57
SCAMP3-204ENST00000465312 PARP4Q9UKK3 1724 aaKnown RBP24.83■■□□□ 1.57
SCAMP3-204ENST00000465312 EXOC5O00471 708 aa24.83■■□□□ 1.57
SCAMP3-204ENST00000465312 IL13P35225 146 aa24.83■■□□□ 1.57
SCAMP3-204ENST00000465312 LRRC37A3O60309 1634 aa24.83■■□□□ 1.56
SCAMP3-204ENST00000465312 NUDCQ9Y266 331 aa24.82■■□□□ 1.56
SCAMP3-204ENST00000465312 DISP2A7MBM2 1401 aa24.81■■□□□ 1.56
SCAMP3-204ENST00000465312 FAM182BQ5T319 152 aa24.8■■□□□ 1.56
SCAMP3-204ENST00000465312 SULT6B1Q6IMI4 303 aa24.8■■□□□ 1.56
SCAMP3-204ENST00000465312 IGSF1Q8N6C5 1336 aa24.8■■□□□ 1.56
SCAMP3-204ENST00000465312 COL3A1P02461 1466 aaPredicted RBP24.79■■□□□ 1.56
SCAMP3-204ENST00000465312 MEGF6O75095 1541 aa24.79■■□□□ 1.56
SCAMP3-204ENST00000465312 HMOX1P09601 288 aa24.78■■□□□ 1.56
SCAMP3-204ENST00000465312 TNS2Q63HR2 1409 aa24.78■■□□□ 1.56
SCAMP3-204ENST00000465312 AEBP1Q8IUX7 1158 aa24.76■■□□□ 1.55
SCAMP3-204ENST00000465312 DDX54Q8TDD1 881 aaKnown RBP24.76■■□□□ 1.55
SCAMP3-204ENST00000465312 U2AF1L5P0DN76 240 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms