RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 SKOR1P84550 965 aa9.42□□□□□ -0.9
CACNA1C-223ENST00000465278 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-223ENST00000465278 CCDC97Q96F63 343 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-223ENST00000465278 RPIAP49247 311 aa9.41□□□□□ -0.9
CACNA1C-223ENST00000465278 SERPINA10Q9UK55 444 aa9.41□□□□□ -0.9
CACNA1C-223ENST00000465278 SH3RF1Q7Z6J0 888 aa9.4□□□□□ -0.9
CACNA1C-223ENST00000465278 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
CACNA1C-223ENST00000465278 SOX11P35716 441 aa9.39□□□□□ -0.91
CACNA1C-223ENST00000465278 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
CACNA1C-223ENST00000465278 CEP126Q9P2H0 1117 aa9.39□□□□□ -0.91
CACNA1C-223ENST00000465278 ADGRL1O94910 1474 aa9.39□□□□□ -0.91
CACNA1C-223ENST00000465278 A0A0G2JS52 829 aa9.38□□□□□ -0.91
CACNA1C-223ENST00000465278 RC3H1Q5TC82 1133 aaKnown RBP9.38□□□□□ -0.91
CACNA1C-223ENST00000465278 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
CACNA1C-223ENST00000465278 RFX1P22670 979 aa9.37□□□□□ -0.91
CACNA1C-223ENST00000465278 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-223ENST00000465278 KDM6BO15054 1643 aa9.37□□□□□ -0.91
CACNA1C-223ENST00000465278 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
CACNA1C-223ENST00000465278 WNT7BP56706 349 aa9.36□□□□□ -0.91
CACNA1C-223ENST00000465278 EHBP1Q8NDI1 1231 aa9.36□□□□□ -0.91
CACNA1C-223ENST00000465278 PRKD2Q9BZL6 878 aa9.36□□□□□ -0.91
CACNA1C-223ENST00000465278 GIGYF1O75420 1035 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 ARID5BQ14865 1188 aa9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 TSGA10IPQ3SY00 556 aa9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 SPRYD7Q5W111 196 aa9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
CACNA1C-223ENST00000465278 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-223ENST00000465278 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-223ENST00000465278 FOXC1Q12948 553 aa9.34□□□□□ -0.91
CACNA1C-223ENST00000465278 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
CACNA1C-223ENST00000465278 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-223ENST00000465278 SLFNL1Q499Z3 407 aa9.33□□□□□ -0.92
CACNA1C-223ENST00000465278 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
CACNA1C-223ENST00000465278 SKIP12755 728 aa9.32□□□□□ -0.92
CACNA1C-223ENST00000465278 RAB15P59190 212 aa9.32□□□□□ -0.92
CACNA1C-223ENST00000465278 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-223ENST00000465278 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
CACNA1C-223ENST00000465278 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
CACNA1C-223ENST00000465278 C1QTNF2Q9BXJ5 285 aa9.32□□□□□ -0.92
CACNA1C-223ENST00000465278 ZNF697Q5TEC3 545 aa9.31□□□□□ -0.92
CACNA1C-223ENST00000465278 ZNF598Q86UK7 904 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-223ENST00000465278 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
CACNA1C-223ENST00000465278 MRGPRX2Q96LB1 330 aa9.31□□□□□ -0.92
CACNA1C-223ENST00000465278 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
CACNA1C-223ENST00000465278 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-223ENST00000465278 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
CACNA1C-223ENST00000465278 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
CACNA1C-223ENST00000465278 CEP164Q9UPV0 1460 aa9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 SIAH2O43255 324 aa9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 DEPDC4Q8N2C3 294 aa9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 KCTD15Q96SI1 283 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 CLASP1Q7Z460 1538 aa9.29□□□□□ -0.92
CACNA1C-223ENST00000465278 WNT7AO00755 349 aa9.28□□□□□ -0.92
CACNA1C-223ENST00000465278 ATP9BO43861 1147 aa9.28□□□□□ -0.92
CACNA1C-223ENST00000465278 TLL2Q9Y6L7 1015 aa9.28□□□□□ -0.92
CACNA1C-223ENST00000465278 GRM5P41594 1212 aa9.27□□□□□ -0.93
CACNA1C-223ENST00000465278 CCDC85AQ96PX6 553 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-223ENST00000465278 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
CACNA1C-223ENST00000465278 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-223ENST00000465278 EIF4G3O43432 1585 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-223ENST00000465278 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-223ENST00000465278 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
CACNA1C-223ENST00000465278 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-223ENST00000465278 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-223ENST00000465278 TNFRSF10AO00220 468 aa9.25□□□□□ -0.93
CACNA1C-223ENST00000465278 NBPF20Q3BBV1 942 aa9.25□□□□□ -0.93
CACNA1C-223ENST00000465278 CDK15Q96Q40 435 aa9.25□□□□□ -0.93
CACNA1C-223ENST00000465278 ZNF608Q9ULD9 1512 aaPredicted RBP9.25□□□□□ -0.93
CACNA1C-223ENST00000465278 ESPNB1AK53 854 aa9.24□□□□□ -0.93
CACNA1C-223ENST00000465278 ALDH1A1P00352 501 aa9.24□□□□□ -0.93
CACNA1C-223ENST00000465278 RNF20Q5VTR2 975 aa9.24□□□□□ -0.93
CACNA1C-223ENST00000465278 CDV3Q9UKY7 258 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-223ENST00000465278 ACIN1Q9UKV3 1341 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-223ENST00000465278 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
CACNA1C-223ENST00000465278 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-223ENST00000465278 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
CACNA1C-223ENST00000465278 PCDHB11Q9Y5F2 797 aa9.23□□□□□ -0.93
CACNA1C-223ENST00000465278 BAZ1BQ9UIG0 1483 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 GDF9O60383 454 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 NCOA4Q13772 614 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 INTS6LQ5JSJ4 861 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 USP17L2Q6R6M4 530 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 ARXQ96QS3 562 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 VRTNQ9H8Y1 702 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
CACNA1C-223ENST00000465278 TTC24A2A3L6 582 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 J3QL48 77 aa9.21□□□□□ -0.94
CACNA1C-223ENST00000465278 FSHRP23945 695 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms