RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
HDAC6-214ENST00000465269 MTFR1LQ9H019 292 aa22.16■■□□□ 1.14
HDAC6-214ENST00000465269 ARHGEF28Q8N1W1 1705 aaKnown RBP22.16■■□□□ 1.14
HDAC6-214ENST00000465269 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
HDAC6-214ENST00000465269 GIGYF1O75420 1035 aaPredicted RBP22.15■■□□□ 1.14
HDAC6-214ENST00000465269 ARXQ96QS3 562 aa22.15■■□□□ 1.14
HDAC6-214ENST00000465269 TOM1L2Q6ZVM7 507 aa22.14■■□□□ 1.13
HDAC6-214ENST00000465269 GPR162Q16538 588 aa22.13■■□□□ 1.13
HDAC6-214ENST00000465269 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
HDAC6-214ENST00000465269 CCDC61Q9Y6R9 512 aa22.12■■□□□ 1.13
HDAC6-214ENST00000465269 PLEKHG3A1L390 1219 aa22.11■■□□□ 1.13
HDAC6-214ENST00000465269 NLRP13Q86W25 1043 aa22.11■■□□□ 1.13
HDAC6-214ENST00000465269 AXIN2Q9Y2T1 843 aa22.11■■□□□ 1.13
HDAC6-214ENST00000465269 PELP1Q8IZL8 1130 aaKnown RBP22.1■■□□□ 1.13
HDAC6-214ENST00000465269 KLHL34Q8N239 644 aa22.1■■□□□ 1.13
HDAC6-214ENST00000465269 WNK3Q9BYP7 1800 aa22.09■■□□□ 1.13
HDAC6-214ENST00000465269 AKAP12Q02952 1782 aa22.09■■□□□ 1.13
HDAC6-214ENST00000465269 AATKQ6ZMQ8 1374 aa22.07■■□□□ 1.12
HDAC6-214ENST00000465269 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
HDAC6-214ENST00000465269 SHANK3Q9BYB0 1731 aa22.06■■□□□ 1.12
HDAC6-214ENST00000465269 COL18A1P39060 1754 aa22.05■■□□□ 1.12
HDAC6-214ENST00000465269 ZNF827Q17R98 1081 aa22.05■■□□□ 1.12
HDAC6-214ENST00000465269 WDR17Q8IZU2 1322 aa22.05■■□□□ 1.12
HDAC6-214ENST00000465269 NLRP6P59044 892 aa22.04■■□□□ 1.12
HDAC6-214ENST00000465269 BCL9O00512 1426 aa22.04■■□□□ 1.12
HDAC6-214ENST00000465269 PPIP5K1Q6PFW1 1433 aa22.04■■□□□ 1.12
HDAC6-214ENST00000465269 MAP3K5Q99683 1374 aa22.03■■□□□ 1.12
HDAC6-214ENST00000465269 SOX12O15370 315 aa22.02■■□□□ 1.12
HDAC6-214ENST00000465269 CABP2Q9NPB3 220 aa22.02■■□□□ 1.12
HDAC6-214ENST00000465269 SLIT3O75094 1523 aa22.01■■□□□ 1.11
HDAC6-214ENST00000465269 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
HDAC6-214ENST00000465269 PAPPAQ13219 1627 aa22.01■■□□□ 1.11
HDAC6-214ENST00000465269 RGPD5Q99666 1765 aa22■■□□□ 1.11
HDAC6-214ENST00000465269 SRPK2P78362 688 aaKnown RBP22■■□□□ 1.11
HDAC6-214ENST00000465269 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
HDAC6-214ENST00000465269 EXOC5O00471 708 aa21.98■■□□□ 1.11
HDAC6-214ENST00000465269 LRRC4BQ9NT99 713 aa21.98■■□□□ 1.11
HDAC6-214ENST00000465269 CPSF1Q10570 1443 aaKnown RBP21.97■■□□□ 1.11
HDAC6-214ENST00000465269 PIK3C2AO00443 1686 aa21.96■■□□□ 1.11
HDAC6-214ENST00000465269 NHSQ6T4R5 1651 aa21.96■■□□□ 1.11
HDAC6-214ENST00000465269 CDCA7Q9BWT1 371 aaPredicted RBP21.96■■□□□ 1.11
HDAC6-214ENST00000465269 CARD10Q9BWT7 1032 aa21.96■■□□□ 1.11
HDAC6-214ENST00000465269 USP6P35125 1406 aa21.96■■□□□ 1.11
HDAC6-214ENST00000465269 YBX3P16989 372 aaKnown RBP eCLIP21.95■■□□□ 1.1
HDAC6-214ENST00000465269 CABP1Q9NZU7 370 aa21.95■■□□□ 1.1
HDAC6-214ENST00000465269 TNS2Q63HR2 1409 aa21.93■■□□□ 1.1
HDAC6-214ENST00000465269 ARHGEF25Q86VW2 580 aa21.93■■□□□ 1.1
HDAC6-214ENST00000465269 BTAF1O14981 1849 aa21.92■■□□□ 1.1
HDAC6-214ENST00000465269 KCNQ4P56696 695 aa21.92■■□□□ 1.1
HDAC6-214ENST00000465269 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
HDAC6-214ENST00000465269 KAT6BQ8WYB5 2073 aa21.91■■□□□ 1.1
HDAC6-214ENST00000465269 ATP10DQ9P241 1426 aa21.9■■□□□ 1.1
HDAC6-214ENST00000465269 AKT1S1Q96B36 256 aa21.9■■□□□ 1.1
HDAC6-214ENST00000465269 PNPLA7Q6ZV29 1317 aa21.89■■□□□ 1.1
HDAC6-214ENST00000465269 POLD1P28340 1107 aa21.89■■□□□ 1.09
HDAC6-214ENST00000465269 BRD4O60885 1362 aaPredicted RBP21.88■■□□□ 1.09
HDAC6-214ENST00000465269 ZNF526Q8TF50 670 aaPredicted RBP21.88■■□□□ 1.09
HDAC6-214ENST00000465269 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
HDAC6-214ENST00000465269 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
HDAC6-214ENST00000465269 TUBGCP6Q96RT7 1819 aa21.86■■□□□ 1.09
HDAC6-214ENST00000465269 CCDC7Q96M83 1385 aa21.85■■□□□ 1.09
HDAC6-214ENST00000465269 ABCC6O95255 1503 aa21.85■■□□□ 1.09
HDAC6-214ENST00000465269 COL24A1Q17RW2 1714 aa21.83■■□□□ 1.09
HDAC6-214ENST00000465269 CENPJQ9HC77 1338 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-214ENST00000465269 HSPA6P17066 643 aa21.83■■□□□ 1.09
HDAC6-214ENST00000465269 SLC16A10Q8TF71 515 aa21.83■■□□□ 1.09
HDAC6-214ENST00000465269 NLRP2Q9NX02 1062 aa21.83■■□□□ 1.09
HDAC6-214ENST00000465269 NFAT5O94916 1531 aa21.83■■□□□ 1.09
HDAC6-214ENST00000465269 TTC21BQ7Z4L5 1316 aa21.82■■□□□ 1.08
HDAC6-214ENST00000465269 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
HDAC6-214ENST00000465269 TFCP2L1Q9NZI6 479 aa21.82■■□□□ 1.08
HDAC6-214ENST00000465269 QRICH2Q9H0J4 1663 aa21.82■■□□□ 1.08
HDAC6-214ENST00000465269 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
HDAC6-214ENST00000465269 GRIN3BO60391 1043 aa21.8■■□□□ 1.08
HDAC6-214ENST00000465269 KCNH5Q8NCM2 988 aa21.8■■□□□ 1.08
HDAC6-214ENST00000465269 MSL1Q68DK7 614 aa21.79■■□□□ 1.08
HDAC6-214ENST00000465269 QSER1Q2KHR3 1735 aa21.79■■□□□ 1.08
HDAC6-214ENST00000465269 IL2RBP14784 551 aa21.78■■□□□ 1.08
HDAC6-214ENST00000465269 MSH5O43196 834 aa21.77■■□□□ 1.08
HDAC6-214ENST00000465269 WWC3Q9ULE0 1092 aa21.77■■□□□ 1.08
HDAC6-214ENST00000465269 KIAA1210Q9ULL0 1709 aa21.76■■□□□ 1.07
HDAC6-214ENST00000465269 ERBB3P21860 1342 aa21.76■■□□□ 1.07
HDAC6-214ENST00000465269 DDX54Q8TDD1 881 aaKnown RBP21.75■■□□□ 1.07
HDAC6-214ENST00000465269 SLC27A3Q5K4L6 730 aa21.74■■□□□ 1.07
HDAC6-214ENST00000465269 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
HDAC6-214ENST00000465269 ADCY9O60503 1353 aa21.74■■□□□ 1.07
HDAC6-214ENST00000465269 COL23A1Q86Y22 540 aaPredicted RBP21.73■■□□□ 1.07
HDAC6-214ENST00000465269 ANKRD24Q8TF21 1146 aa21.71■■□□□ 1.07
HDAC6-214ENST00000465269 PRIM1P49642 420 aaKnown RBP21.7■■□□□ 1.06
HDAC6-214ENST00000465269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.7■■□□□ 1.06
HDAC6-214ENST00000465269 TTC21AQ8NDW8 1320 aa21.69■■□□□ 1.06
HDAC6-214ENST00000465269 NSD2O96028 1365 aa21.67■■□□□ 1.06
HDAC6-214ENST00000465269 KTN1Q86UP2 1357 aaKnown RBP21.67■■□□□ 1.06
HDAC6-214ENST00000465269 NME9Q86XW9 330 aa21.67■■□□□ 1.06
HDAC6-214ENST00000465269 ZNF692Q9BU19 519 aaPredicted RBP21.67■■□□□ 1.06
HDAC6-214ENST00000465269 LTN1O94822 1766 aa21.66■■□□□ 1.06
HDAC6-214ENST00000465269 EVC2Q86UK5 1308 aa21.66■■□□□ 1.06
HDAC6-214ENST00000465269 KIF3CO14782 793 aa21.66■■□□□ 1.06
HDAC6-214ENST00000465269 CCNL1Q9UK58 526 aaPredicted RBP21.66■■□□□ 1.06
HDAC6-214ENST00000465269 DOT1LQ8TEK3 1739 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms