RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	PPM1G	O15355	546 aa	Predicted RBP	33.1	■■■□□ 2.89
RERE-208	ENST00000465125	FLT4	P35916	1363 aa		33.09	■■■□□ 2.89
RERE-208	ENST00000465125	AFF2	P51816	1311 aa		33.08	■■■□□ 2.89
RERE-208	ENST00000465125	HOXC9	P31274	260 aa		33.08	■■■□□ 2.89
RERE-208	ENST00000465125	IP6K1	Q92551	441 aa		33.08	■■■□□ 2.89
RERE-208	ENST00000465125	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.08	■■■□□ 2.89
RERE-208	ENST00000465125	BTG4	Q9NY30	223 aa		33.08	■■■□□ 2.89
RERE-208	ENST00000465125	CAMTA1	Q9Y6Y1	1673 aa		33.07	■■■□□ 2.89
RERE-208	ENST00000465125	BLM	P54132	1417 aa	Predicted RBP	33.07	■■■□□ 2.88
RERE-208	ENST00000465125	ANP32C	O43423	234 aa		33.06	■■■□□ 2.88
RERE-208	ENST00000465125	PPP2R1A	P30153	589 aa		33.06	■■■□□ 2.88
RERE-208	ENST00000465125	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.06	■■■□□ 2.88
RERE-208	ENST00000465125	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.05	■■■□□ 2.88
RERE-208	ENST00000465125	NRAP	Q86VF7	1730 aa		33.05	■■■□□ 2.88
RERE-208	ENST00000465125	AXIN2	Q9Y2T1	843 aa		33.05	■■■□□ 2.88
RERE-208	ENST00000465125	RGPD5	Q99666	1765 aa		33.05	■■■□□ 2.88
RERE-208	ENST00000465125	MTHFS	P49914	203 aa		33.03	■■■□□ 2.88
RERE-208	ENST00000465125	USP21	Q9UK80	565 aa		33.03	■■■□□ 2.88
RERE-208	ENST00000465125	COL5A2	P05997	1499 aa	Predicted RBP	33.03	■■■□□ 2.88
RERE-208	ENST00000465125	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.02	■■■□□ 2.88
RERE-208	ENST00000465125	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.02	■■■□□ 2.88
RERE-208	ENST00000465125	BCL9L	Q86UU0	1499 aa		33.01	■■■□□ 2.88
RERE-208	ENST00000465125	INSR	P06213	1382 aa		33.01	■■■□□ 2.88
RERE-208	ENST00000465125	PHF23	Q9BUL5	403 aa	Predicted RBP	33.01	■■■□□ 2.87
RERE-208	ENST00000465125	HSP90AB2P	Q58FF8	381 aa		33	■■■□□ 2.87
RERE-208	ENST00000465125	DIEXF	Q68CQ4	756 aa	Known RBP	33	■■■□□ 2.87
RERE-208	ENST00000465125	UNC5CL	Q8IV45	518 aa		33	■■■□□ 2.87
RERE-208	ENST00000465125	STRN4	Q9NRL3	753 aa		33	■■■□□ 2.87
RERE-208	ENST00000465125	EVA1C	P58658	441 aa		32.99	■■■□□ 2.87
RERE-208	ENST00000465125	ANKRD24	Q8TF21	1146 aa		32.98	■■■□□ 2.87
RERE-208	ENST00000465125	ERBB3	P21860	1342 aa		32.97	■■■□□ 2.87
RERE-208	ENST00000465125	CSB-PGBD3	P0DP91	1061 aa		32.96	■■■□□ 2.87
RERE-208	ENST00000465125	LTV1	Q96GA3	475 aa	Predicted RBP	32.96	■■■□□ 2.87
RERE-208	ENST00000465125	ZNF772	Q68DY9	489 aa	Predicted RBP	32.95	■■■□□ 2.87
RERE-208	ENST00000465125	CFAP53	Q96M91	514 aa		32.94	■■■□□ 2.86
RERE-208	ENST00000465125	WDR17	Q8IZU2	1322 aa		32.94	■■■□□ 2.86
RERE-208	ENST00000465125	FAM208A	Q9UK61	1670 aa	Known RBP	32.94	■■■□□ 2.86
RERE-208	ENST00000465125	LARP1	Q6PKG0	1096 aa	Known RBP	32.91	■■■□□ 2.86
RERE-208	ENST00000465125	ATRN	O75882	1429 aa		32.91	■■■□□ 2.86
RERE-208	ENST00000465125	VPS72	Q15906	364 aa		32.9	■■■□□ 2.86
RERE-208	ENST00000465125	TRPC5	Q9UL62	973 aa	Predicted RBP	32.9	■■■□□ 2.86
RERE-208	ENST00000465125	COL3A1	P02461	1466 aa	Predicted RBP	32.9	■■■□□ 2.86
RERE-208	ENST00000465125	CRB1	P82279	1406 aa		32.89	■■■□□ 2.86
RERE-208	ENST00000465125	EIF4A2	Q14240	407 aa	Known RBP	32.89	■■■□□ 2.86
RERE-208	ENST00000465125	TOM1L2	Q6ZVM7	507 aa		32.89	■■■□□ 2.86
RERE-208	ENST00000465125	CCDC9	Q9Y3X0	531 aa	Known RBP	32.89	■■■□□ 2.86
RERE-208	ENST00000465125	NLRP2	Q9NX02	1062 aa		32.87	■■■□□ 2.85
RERE-208	ENST00000465125	QTRT2	Q9H974	415 aa	Known RBP	32.86	■■■□□ 2.85
RERE-208	ENST00000465125	DIAPH1	O60610	1272 aa	Known RBP	32.85	■■■□□ 2.85
RERE-208	ENST00000465125	RGS17	Q9UGC6	210 aa	Predicted RBP	32.85	■■■□□ 2.85
RERE-208	ENST00000465125	SPATA31A5	Q5VU36	1347 aa		32.84	■■■□□ 2.85
RERE-208	ENST00000465125	SPATA31A7	Q8IWB4	1347 aa		32.84	■■■□□ 2.85
RERE-208	ENST00000465125	RGPD2	P0DJD1	1756 aa		32.83	■■■□□ 2.85
RERE-208	ENST00000465125	SPATA31A1	Q5TZJ5	1347 aa		32.82	■■■□□ 2.84
RERE-208	ENST00000465125	CARD10	Q9BWT7	1032 aa		32.82	■■■□□ 2.84
RERE-208	ENST00000465125	IL13	P35225	146 aa		32.81	■■■□□ 2.84
RERE-208	ENST00000465125	USP35	Q9P2H5	1018 aa		32.81	■■■□□ 2.84
RERE-208	ENST00000465125	GJD4	Q96KN9	370 aa	Predicted RBP	32.8	■■■□□ 2.84
RERE-208	ENST00000465125	NBPF6	Q5VWK0	638 aa		32.79	■■■□□ 2.84
RERE-208	ENST00000465125	NBPF4	Q96M43	638 aa		32.79	■■■□□ 2.84
RERE-208	ENST00000465125	GLI3	P10071	1580 aa		32.79	■■■□□ 2.84
RERE-208	ENST00000465125	RGPD1	P0DJD0	1748 aa		32.77	■■■□□ 2.84
RERE-208	ENST00000465125	TCP11L2	Q8N4U5	519 aa		32.77	■■■□□ 2.84
RERE-208	ENST00000465125	EYA1	Q99502	592 aa		32.77	■■■□□ 2.84
RERE-208	ENST00000465125	NUDC	Q9Y266	331 aa		32.77	■■■□□ 2.84
RERE-208	ENST00000465125	POTEA	Q6S8J7	498 aa		32.76	■■■□□ 2.83
RERE-208	ENST00000465125	USHBP1	Q8N6Y0	703 aa		32.76	■■■□□ 2.83
RERE-208	ENST00000465125	IGSF1	Q8N6C5	1336 aa		32.76	■■■□□ 2.83
RERE-208	ENST00000465125	THRAP3	Q9Y2W1	955 aa	Known RBP	32.75	■■■□□ 2.83
RERE-208	ENST00000465125	U2SURP	O15042	1029 aa	Known RBP	32.74	■■■□□ 2.83
RERE-208	ENST00000465125	RBM6	P78332	1123 aa	Known RBP	32.74	■■■□□ 2.83
RERE-208	ENST00000465125	NCAPD2	Q15021	1401 aa		32.74	■■■□□ 2.83
RERE-208	ENST00000465125	WNK3	Q9BYP7	1800 aa		32.73	■■■□□ 2.83
RERE-208	ENST00000465125	RXRB	P28702	533 aa		32.71	■■■□□ 2.83
RERE-208	ENST00000465125	BARGIN	Q6ZT62	677 aa		32.7	■■■□□ 2.83
RERE-208	ENST00000465125	MRS2	Q9HD23	443 aa		32.7	■■■□□ 2.83
RERE-208	ENST00000465125	FAM98C	Q17RN3	349 aa	Known RBP	32.69	■■■□□ 2.82
RERE-208	ENST00000465125	CCDC184	Q52MB2	194 aa		32.68	■■■□□ 2.82
RERE-208	ENST00000465125	MIER1	Q8N108	512 aa		32.67	■■■□□ 2.82
RERE-208	ENST00000465125	DISP2	A7MBM2	1401 aa		32.67	■■■□□ 2.82
RERE-208	ENST00000465125	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.66	■■■□□ 2.82
RERE-208	ENST00000465125	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
RERE-208	ENST00000465125	SULT6B1	Q6IMI4	303 aa		32.66	■■■□□ 2.82
RERE-208	ENST00000465125	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.66	■■■□□ 2.82
RERE-208	ENST00000465125		A0A0G2JS52	829 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	IL2RB	P14784	551 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	MYT1	Q01538	1121 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	AEBP1	Q8IUX7	1158 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	RAPGEF4	Q8WZA2	1011 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	KDR	P35968	1356 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	THSD7A	Q9UPZ6	1657 aa		32.65	■■■□□ 2.82
RERE-208	ENST00000465125	PARP4	Q9UKK3	1724 aa	Known RBP	32.65	■■■□□ 2.82
RERE-208	ENST00000465125	HMOX1	P09601	288 aa		32.64	■■■□□ 2.82
RERE-208	ENST00000465125	WDR43	Q15061	677 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
RERE-208	ENST00000465125	MEGF6	O75095	1541 aa		32.63	■■■□□ 2.81
RERE-208	ENST00000465125	CCER2	I3L3R5	266 aa		32.62	■■■□□ 2.81
RERE-208	ENST00000465125	TAT	P17735	454 aa	Predicted RBP	32.61	■■■□□ 2.81
RERE-208	ENST00000465125	ONECUT3	O60422	494 aa	Predicted RBP	32.6	■■■□□ 2.81
RERE-208	ENST00000465125	OVOS2	A0A0G2JMS6	1433 aa		32.6	■■■□□ 2.81
RERE-208	ENST00000465125	LRRC37A3	O60309	1634 aa		32.59	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms