RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 FNBP4Q8N3X1 1017 aaPredicted RBP10.37□□□□□ -0.75
KPNA1-202ENST00000464940 PTPRNQ16849 979 aa10.36□□□□□ -0.75
KPNA1-202ENST00000464940 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
KPNA1-202ENST00000464940 TRAIPQ9BWF2 469 aa10.36□□□□□ -0.75
KPNA1-202ENST00000464940 LOC100996750A0A140TA64 210 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 CTDSPL2Q05D32 466 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 TSC1Q92574 1164 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 KRTAP4-6Q9BYQ5 205 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 UNC93B1Q9H1C4 597 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 EVA1BQ9NVM1 165 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 TLL2Q9Y6L7 1015 aa10.35□□□□□ -0.75
KPNA1-202ENST00000464940 POM121Q96HA1 1249 aa10.34□□□□□ -0.75
KPNA1-202ENST00000464940 AP1G2O75843 785 aa10.33□□□□□ -0.76
KPNA1-202ENST00000464940 MRPL14Q6P1L8 145 aaKnown RBP10.33□□□□□ -0.76
KPNA1-202ENST00000464940 MPNDQ8N594 471 aa10.33□□□□□ -0.76
KPNA1-202ENST00000464940 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
KPNA1-202ENST00000464940 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
KPNA1-202ENST00000464940 VARSP26640 1264 aaKnown RBP10.32□□□□□ -0.76
KPNA1-202ENST00000464940 NNTQ13423 1086 aa10.32□□□□□ -0.76
KPNA1-202ENST00000464940 SCARF1Q14162 830 aa10.32□□□□□ -0.76
KPNA1-202ENST00000464940 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
KPNA1-202ENST00000464940 BANK1Q8NDB2 785 aa10.32□□□□□ -0.76
KPNA1-202ENST00000464940 BAP1Q92560 729 aa10.32□□□□□ -0.76
KPNA1-202ENST00000464940 KCNH2Q12809 1159 aa10.3□□□□□ -0.76
KPNA1-202ENST00000464940 ZNF511Q8NB15 262 aa10.3□□□□□ -0.76
KPNA1-202ENST00000464940 ADH1CP00326 375 aa10.29□□□□□ -0.76
KPNA1-202ENST00000464940 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
KPNA1-202ENST00000464940 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
KPNA1-202ENST00000464940 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
KPNA1-202ENST00000464940 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
KPNA1-202ENST00000464940 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
KPNA1-202ENST00000464940 TIMP2P16035 220 aa10.28□□□□□ -0.76
KPNA1-202ENST00000464940 WDR4P57081 412 aaKnown RBP10.28□□□□□ -0.76
KPNA1-202ENST00000464940 SMARCA4P51532 1647 aa10.27□□□□□ -0.77
KPNA1-202ENST00000464940 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
KPNA1-202ENST00000464940 ZNF330Q9Y3S2 320 aaPredicted RBP10.27□□□□□ -0.77
KPNA1-202ENST00000464940 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
KPNA1-202ENST00000464940 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
KPNA1-202ENST00000464940 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
KPNA1-202ENST00000464940 ATAD2BQ9ULI0 1458 aa10.25□□□□□ -0.77
KPNA1-202ENST00000464940 SOBPA7XYQ1 873 aa10.25□□□□□ -0.77
KPNA1-202ENST00000464940 CTHP32929 405 aa10.25□□□□□ -0.77
KPNA1-202ENST00000464940 KLF16Q9BXK1 252 aaPredicted RBP10.24□□□□□ -0.77
KPNA1-202ENST00000464940 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
KPNA1-202ENST00000464940 SOCS7O14512 581 aa10.23□□□□□ -0.77
KPNA1-202ENST00000464940 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
KPNA1-202ENST00000464940 FAM174AQ8TBP5 190 aa10.23□□□□□ -0.77
KPNA1-202ENST00000464940 MAP10Q9P2G4 905 aa10.23□□□□□ -0.77
KPNA1-202ENST00000464940 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
KPNA1-202ENST00000464940 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
KPNA1-202ENST00000464940 CDK15Q96Q40 435 aa10.21□□□□□ -0.77
KPNA1-202ENST00000464940 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
KPNA1-202ENST00000464940 CUX2O14529 1486 aa10.21□□□□□ -0.78
KPNA1-202ENST00000464940 KCNMA1Q12791 1236 aa10.2□□□□□ -0.78
KPNA1-202ENST00000464940 SUZ12Q15022 739 aaKnown RBP10.2□□□□□ -0.78
KPNA1-202ENST00000464940 NR6A1Q15406 480 aa10.2□□□□□ -0.78
KPNA1-202ENST00000464940 ARMC2Q8NEN0 867 aa10.2□□□□□ -0.78
KPNA1-202ENST00000464940 PEG3Q9GZU2 1588 aa10.19□□□□□ -0.78
KPNA1-202ENST00000464940 MAN1A2O60476 641 aa10.19□□□□□ -0.78
KPNA1-202ENST00000464940 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
KPNA1-202ENST00000464940 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
KPNA1-202ENST00000464940 ACIN1Q9UKV3 1341 aaKnown RBP10.18□□□□□ -0.78
KPNA1-202ENST00000464940 ZIC2O95409 532 aaPredicted RBP10.18□□□□□ -0.78
KPNA1-202ENST00000464940 RETREG2Q8NC44 543 aa10.18□□□□□ -0.78
KPNA1-202ENST00000464940 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
KPNA1-202ENST00000464940 EPS8L1Q8TE68 723 aa10.18□□□□□ -0.78
KPNA1-202ENST00000464940 GJD4Q96KN9 370 aaPredicted RBP10.18□□□□□ -0.78
KPNA1-202ENST00000464940 TRIM34Q9BYJ4 488 aa10.18□□□□□ -0.78
KPNA1-202ENST00000464940 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
KPNA1-202ENST00000464940 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
KPNA1-202ENST00000464940 PDE4CQ08493 712 aa10.17□□□□□ -0.78
KPNA1-202ENST00000464940 ARID5BQ14865 1188 aa10.17□□□□□ -0.78
KPNA1-202ENST00000464940 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
KPNA1-202ENST00000464940 NR5A1Q13285 461 aa10.16□□□□□ -0.78
KPNA1-202ENST00000464940 C6orf118Q5T5N4 469 aa10.16□□□□□ -0.78
KPNA1-202ENST00000464940 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.782e-6■■■■■ 39.1
KPNA1-202ENST00000464940 ITPKCQ96DU7 683 aa10.16□□□□□ -0.78
KPNA1-202ENST00000464940 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
KPNA1-202ENST00000464940 PNMA1Q8ND90 353 aa10.15□□□□□ -0.78
KPNA1-202ENST00000464940 FOXJ1Q92949 421 aa10.15□□□□□ -0.78
KPNA1-202ENST00000464940 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
KPNA1-202ENST00000464940 GDPD2Q9HCC8 539 aa10.15□□□□□ -0.78
KPNA1-202ENST00000464940 FKBPLQ9UIM3 349 aa10.15□□□□□ -0.78
KPNA1-202ENST00000464940 GSK3AP49840 483 aa10.14□□□□□ -0.79
KPNA1-202ENST00000464940 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
KPNA1-202ENST00000464940 UPP2O95045 317 aa10.13□□□□□ -0.79
KPNA1-202ENST00000464940 NR3C2P08235 984 aa10.13□□□□□ -0.79
KPNA1-202ENST00000464940 BMP2P12643 396 aa10.13□□□□□ -0.79
KPNA1-202ENST00000464940 PDXDC2PQ6P474 469 aa10.13□□□□□ -0.79
KPNA1-202ENST00000464940 TMCO4Q5TGY1 634 aa10.12□□□□□ -0.79
KPNA1-202ENST00000464940 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
KPNA1-202ENST00000464940 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
KPNA1-202ENST00000464940 GRM5P41594 1212 aa10.11□□□□□ -0.79
KPNA1-202ENST00000464940 GZF1Q9H116 711 aaPredicted RBP10.11□□□□□ -0.79
KPNA1-202ENST00000464940 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
KPNA1-202ENST00000464940 ABL2P42684 1182 aa10.1□□□□□ -0.79
KPNA1-202ENST00000464940 IRF5Q13568 498 aa10.1□□□□□ -0.79
KPNA1-202ENST00000464940 AGERQ15109 404 aa10.1□□□□□ -0.79
KPNA1-202ENST00000464940 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
KPNA1-202ENST00000464940 MROH2BQ7Z745 1585 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms