RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 ANP32CO43423 234 aa12.23□□□□□ -0.45
NUDCD3-204ENST00000464812 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
NUDCD3-204ENST00000464812 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-204ENST00000464812 KIAA0232Q92628 1395 aa12.22□□□□□ -0.45
NUDCD3-204ENST00000464812 SOCS7O14512 581 aa12.22□□□□□ -0.45
NUDCD3-204ENST00000464812 FBLN1P23142 703 aa12.22□□□□□ -0.45
NUDCD3-204ENST00000464812 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-204ENST00000464812 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-204ENST00000464812 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
NUDCD3-204ENST00000464812 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-204ENST00000464812 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
NUDCD3-204ENST00000464812 ABTB2Q8N961 1025 aa12.21□□□□□ -0.45
NUDCD3-204ENST00000464812 USP21Q9UK80 565 aa12.21□□□□□ -0.45
NUDCD3-204ENST00000464812 EP400Q96L91 3159 aa12.21□□□□□ -0.46
NUDCD3-204ENST00000464812 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 NLRP6P59044 892 aa12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 RALBP1Q15311 655 aa12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 COG3Q96JB2 828 aa12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 BRWD3Q6RI45 1802 aa12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 CDK12Q9NYV4 1490 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-204ENST00000464812 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-204ENST00000464812 UNC5CLQ8IV45 518 aa12.19□□□□□ -0.46
NUDCD3-204ENST00000464812 RGPD2P0DJD1 1756 aa12.19□□□□□ -0.46
NUDCD3-204ENST00000464812 CPDO75976 1380 aa12.18□□□□□ -0.46
NUDCD3-204ENST00000464812 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
NUDCD3-204ENST00000464812 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
NUDCD3-204ENST00000464812 GCP02774 474 aa12.18□□□□□ -0.46
NUDCD3-204ENST00000464812 SOX12O15370 315 aa12.17□□□□□ -0.46
NUDCD3-204ENST00000464812 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-204ENST00000464812 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-204ENST00000464812 BTG4Q9NY30 223 aa12.17□□□□□ -0.46
NUDCD3-204ENST00000464812 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
NUDCD3-204ENST00000464812 RXRBP28702 533 aa12.16□□□□□ -0.46
NUDCD3-204ENST00000464812 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-204ENST00000464812 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
NUDCD3-204ENST00000464812 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
NUDCD3-204ENST00000464812 VPS72Q15906 364 aa12.15□□□□□ -0.46
NUDCD3-204ENST00000464812 NLRP13Q86W25 1043 aa12.15□□□□□ -0.46
NUDCD3-204ENST00000464812 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-204ENST00000464812 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-204ENST00000464812 ABCC6O95255 1503 aa12.15□□□□□ -0.46
NUDCD3-204ENST00000464812 COL5A2P05997 1499 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-204ENST00000464812 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
NUDCD3-204ENST00000464812 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
NUDCD3-204ENST00000464812 PRDM11Q9NQV5 511 aa12.14□□□□□ -0.47
NUDCD3-204ENST00000464812 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
NUDCD3-204ENST00000464812 CCER2I3L3R5 266 aa12.13□□□□□ -0.47
NUDCD3-204ENST00000464812 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-204ENST00000464812 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-204ENST00000464812 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
NUDCD3-204ENST00000464812 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
NUDCD3-204ENST00000464812 MTHFSP49914 203 aa12.12□□□□□ -0.47
NUDCD3-204ENST00000464812 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-204ENST00000464812 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-204ENST00000464812 RTL1A6NKG5 1358 aa12.12□□□□□ -0.47
NUDCD3-204ENST00000464812 FLT4P35916 1363 aa12.11□□□□□ -0.47
NUDCD3-204ENST00000464812 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-204ENST00000464812 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
NUDCD3-204ENST00000464812 INSRP06213 1382 aa12.1□□□□□ -0.47
NUDCD3-204ENST00000464812 WNK3Q9BYP7 1800 aa12.1□□□□□ -0.47
NUDCD3-204ENST00000464812 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
NUDCD3-204ENST00000464812 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
NUDCD3-204ENST00000464812 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
NUDCD3-204ENST00000464812 HOXC9P31274 260 aa12.09□□□□□ -0.47
NUDCD3-204ENST00000464812 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
NUDCD3-204ENST00000464812 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
NUDCD3-204ENST00000464812 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-204ENST00000464812 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
NUDCD3-204ENST00000464812 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-204ENST00000464812 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
NUDCD3-204ENST00000464812 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-204ENST00000464812 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
NUDCD3-204ENST00000464812 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
NUDCD3-204ENST00000464812 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-204ENST00000464812 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
NUDCD3-204ENST00000464812 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-204ENST00000464812 LRRC37A3O60309 1634 aa12.06□□□□□ -0.48
NUDCD3-204ENST00000464812 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-204ENST00000464812 IL13P35225 146 aa12.05□□□□□ -0.48
NUDCD3-204ENST00000464812 AMPHP49418 695 aa12.05□□□□□ -0.48
NUDCD3-204ENST00000464812 IP6K1Q92551 441 aa12.05□□□□□ -0.48
NUDCD3-204ENST00000464812 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
NUDCD3-204ENST00000464812 CRB1P82279 1406 aa12.04□□□□□ -0.48
NUDCD3-204ENST00000464812 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
NUDCD3-204ENST00000464812 ERBB3P21860 1342 aa12.04□□□□□ -0.48
NUDCD3-204ENST00000464812 WDR17Q8IZU2 1322 aa12.04□□□□□ -0.48
NUDCD3-204ENST00000464812 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
NUDCD3-204ENST00000464812 VIRMAQ69YN4 1812 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-204ENST00000464812 CFAP53Q96M91 514 aa12.03□□□□□ -0.48
NUDCD3-204ENST00000464812 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
NUDCD3-204ENST00000464812 DIAPH1O60610 1272 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-204ENST00000464812 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
NUDCD3-204ENST00000464812 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
NUDCD3-204ENST00000464812 CCDC9Q9Y3X0 531 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-204ENST00000464812 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
NUDCD3-204ENST00000464812 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
NUDCD3-204ENST00000464812 TNS1Q9HBL0 1735 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms