RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TOM1L2Q6ZVM7 507 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 CABP1Q9NZU7 370 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 RGPD5Q99666 1765 aa21.12■□□□□ 0.97
MCF2L-220ENST00000464800 CPSF1Q10570 1443 aaKnown RBP21.11■□□□□ 0.97
MCF2L-220ENST00000464800 PLSCR1O15162 318 aa21.09■□□□□ 0.97
MCF2L-220ENST00000464800 WDR17Q8IZU2 1322 aa21.08■□□□□ 0.97
MCF2L-220ENST00000464800 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
MCF2L-220ENST00000464800 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-220ENST00000464800 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
MCF2L-220ENST00000464800 BCL9O00512 1426 aa21.06■□□□□ 0.96
MCF2L-220ENST00000464800 CDCA7Q9BWT1 371 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-220ENST00000464800 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-220ENST00000464800 AXIN2Q9Y2T1 843 aa21.05■□□□□ 0.96
MCF2L-220ENST00000464800 MYOM1P52179 1685 aa21.04■□□□□ 0.96
MCF2L-220ENST00000464800 ABCC6O95255 1503 aa21.04■□□□□ 0.96
MCF2L-220ENST00000464800 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
MCF2L-220ENST00000464800 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-220ENST00000464800 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
MCF2L-220ENST00000464800 NFAT5O94916 1531 aa21.03■□□□□ 0.96
MCF2L-220ENST00000464800 CSB-PGBD3P0DP91 1061 aa21.02■□□□□ 0.96
MCF2L-220ENST00000464800 ARHGEF25Q86VW2 580 aa21.02■□□□□ 0.96
MCF2L-220ENST00000464800 TTC21BQ7Z4L5 1316 aa21.02■□□□□ 0.95
MCF2L-220ENST00000464800 MON2Q7Z3U7 1717 aa21.01■□□□□ 0.95
MCF2L-220ENST00000464800 ZNF692Q9BU19 519 aaPredicted RBP21.01■□□□□ 0.95
MCF2L-220ENST00000464800 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
MCF2L-220ENST00000464800 NHSQ6T4R5 1651 aa21■□□□□ 0.95
MCF2L-220ENST00000464800 SOX12O15370 315 aa21■□□□□ 0.95
MCF2L-220ENST00000464800 CARD10Q9BWT7 1032 aa21■□□□□ 0.95
MCF2L-220ENST00000464800 TNS2Q63HR2 1409 aa20.99■□□□□ 0.95
MCF2L-220ENST00000464800 L3MBTL2Q969R5 705 aa20.99■□□□□ 0.95
MCF2L-220ENST00000464800 CCDC7Q96M83 1385 aa20.98■□□□□ 0.95
MCF2L-220ENST00000464800 PROM2Q8N271 834 aa20.98■□□□□ 0.95
MCF2L-220ENST00000464800 USP54Q70EL1 1684 aa20.98■□□□□ 0.95
MCF2L-220ENST00000464800 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
MCF2L-220ENST00000464800 ZBTB7AO95365 584 aa20.97■□□□□ 0.95
MCF2L-220ENST00000464800 PDGFDQ9GZP0 370 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-220ENST00000464800 LTN1O94822 1766 aa20.97■□□□□ 0.95
MCF2L-220ENST00000464800 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
MCF2L-220ENST00000464800 TXNRD1Q16881 649 aa20.96■□□□□ 0.95
MCF2L-220ENST00000464800 STK32BQ9NY57 414 aa20.96■□□□□ 0.95
MCF2L-220ENST00000464800 EXOC5O00471 708 aa20.95■□□□□ 0.94
MCF2L-220ENST00000464800 PTGER2P43116 358 aa20.93■□□□□ 0.94
MCF2L-220ENST00000464800 SLC15A2Q16348 729 aa20.92■□□□□ 0.94
MCF2L-220ENST00000464800 ATF5Q9Y2D1 282 aaPredicted RBP20.92■□□□□ 0.94
MCF2L-220ENST00000464800 PAPPAQ13219 1627 aa20.92■□□□□ 0.94
MCF2L-220ENST00000464800 BTAF1O14981 1849 aa20.92■□□□□ 0.94
MCF2L-220ENST00000464800 CHD4Q14839 1912 aa20.88■□□□□ 0.93
MCF2L-220ENST00000464800 USP31Q70CQ4 1352 aa20.88■□□□□ 0.93
MCF2L-220ENST00000464800 ERBB3P21860 1342 aa20.88■□□□□ 0.93
MCF2L-220ENST00000464800 MTFR1LQ9H019 292 aa20.88■□□□□ 0.93
MCF2L-220ENST00000464800 SBNO2Q9Y2G9 1366 aa20.87■□□□□ 0.93
MCF2L-220ENST00000464800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.87■□□□□ 0.93
MCF2L-220ENST00000464800 SIN3AQ96ST3 1273 aa20.87■□□□□ 0.93
MCF2L-220ENST00000464800 FHDC1Q9C0D6 1143 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-220ENST00000464800 NLRP2Q9NX02 1062 aa20.87■□□□□ 0.93
MCF2L-220ENST00000464800 ACSBG1Q96GR2 724 aa20.86■□□□□ 0.93
MCF2L-220ENST00000464800 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
MCF2L-220ENST00000464800 IL2RBP14784 551 aa20.85■□□□□ 0.93
MCF2L-220ENST00000464800 SYT17Q9BSW7 474 aa20.85■□□□□ 0.93
MCF2L-220ENST00000464800 FAM208AQ9UK61 1670 aaKnown RBP20.85■□□□□ 0.93
MCF2L-220ENST00000464800 KAT6BQ8WYB5 2073 aa20.85■□□□□ 0.93
MCF2L-220ENST00000464800 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
MCF2L-220ENST00000464800 NME9Q86XW9 330 aa20.84■□□□□ 0.93
MCF2L-220ENST00000464800 SGIP1Q9BQI5 828 aa20.83■□□□□ 0.93
MCF2L-220ENST00000464800 QSER1Q2KHR3 1735 aa20.83■□□□□ 0.92
MCF2L-220ENST00000464800 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
MCF2L-220ENST00000464800 ZNF784Q8NCA9 323 aaPredicted RBP20.81■□□□□ 0.92
MCF2L-220ENST00000464800 ANKRD24Q8TF21 1146 aa20.81■□□□□ 0.92
MCF2L-220ENST00000464800 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-220ENST00000464800 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
MCF2L-220ENST00000464800 ARXQ96QS3 562 aa20.79■□□□□ 0.92
MCF2L-220ENST00000464800 MAP3K5Q99683 1374 aa20.79■□□□□ 0.92
MCF2L-220ENST00000464800 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
MCF2L-220ENST00000464800 ZNF827Q17R98 1081 aa20.77■□□□□ 0.92
MCF2L-220ENST00000464800 DOT1LQ8TEK3 1739 aa20.77■□□□□ 0.92
MCF2L-220ENST00000464800 COL24A1Q17RW2 1714 aa20.76■□□□□ 0.91
MCF2L-220ENST00000464800 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
MCF2L-220ENST00000464800 CARD11Q9BXL7 1154 aa20.76■□□□□ 0.91
MCF2L-220ENST00000464800 LRRC4BQ9NT99 713 aa20.75■□□□□ 0.91
MCF2L-220ENST00000464800 TERF2IPQ9NYB0 399 aa20.75■□□□□ 0.91
MCF2L-220ENST00000464800 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
MCF2L-220ENST00000464800 LY75O60449 1722 aa20.73■□□□□ 0.91
MCF2L-220ENST00000464800 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
MCF2L-220ENST00000464800 SLC27A3Q5K4L6 730 aa20.72■□□□□ 0.91
MCF2L-220ENST00000464800 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
MCF2L-220ENST00000464800 DDX54Q8TDD1 881 aaKnown RBP20.71■□□□□ 0.91
MCF2L-220ENST00000464800 IP6K1Q92551 441 aa20.71■□□□□ 0.91
MCF2L-220ENST00000464800 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
MCF2L-220ENST00000464800 SLC16A10Q8TF71 515 aa20.7■□□□□ 0.9
MCF2L-220ENST00000464800 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-220ENST00000464800 UTRNP46939 3433 aa20.7■□□□□ 0.9
MCF2L-220ENST00000464800 POLD1P28340 1107 aa20.69■□□□□ 0.9
MCF2L-220ENST00000464800 GPR162Q16538 588 aa20.68■□□□□ 0.9
MCF2L-220ENST00000464800 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
MCF2L-220ENST00000464800 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-220ENST00000464800 PUS7Q96PZ0 661 aaKnown RBP20.68■□□□□ 0.9
MCF2L-220ENST00000464800 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
MCF2L-220ENST00000464800 ANKRD36BQ8N2N9 1353 aa20.68■□□□□ 0.9
MCF2L-220ENST00000464800 TFCP2L1Q9NZI6 479 aa20.66■□□□□ 0.9
MCF2L-220ENST00000464800 NSD2O96028 1365 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms