RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ARHGEF25Q86VW2 580 aa36.43■■■■□ 3.42
U2AF1-206ENST00000464750 THRAP3Q9Y2W1 955 aaKnown RBP36.43■■■■□ 3.42
U2AF1-206ENST00000464750 TERF2IPQ9NYB0 399 aa36.42■■■■□ 3.42
U2AF1-206ENST00000464750 WNK3Q9BYP7 1800 aa36.42■■■■□ 3.42
U2AF1-206ENST00000464750 NINLQ9Y2I6 1382 aa36.41■■■■□ 3.42
U2AF1-206ENST00000464750 NME9Q86XW9 330 aa36.41■■■■□ 3.42
U2AF1-206ENST00000464750 SLC24A1O60721 1099 aa36.4■■■■□ 3.42
U2AF1-206ENST00000464750 AXIN2Q9Y2T1 843 aa36.4■■■■□ 3.42
U2AF1-206ENST00000464750 ABCC6O95255 1503 aa36.39■■■■□ 3.42
U2AF1-206ENST00000464750 LTN1O94822 1766 aa36.38■■■■□ 3.41
U2AF1-206ENST00000464750 BAG6P46379 1132 aa36.38■■■■□ 3.41
U2AF1-206ENST00000464750 TIMELESSQ9UNS1 1208 aa36.37■■■■□ 3.41
U2AF1-206ENST00000464750 WDR17Q8IZU2 1322 aa36.36■■■■□ 3.41
U2AF1-206ENST00000464750 PDE3BQ13370 1112 aa36.36■■■■□ 3.41
U2AF1-206ENST00000464750 TOM1L2Q6ZVM7 507 aa36.36■■■■□ 3.41
U2AF1-206ENST00000464750 LRRC37A3O60309 1634 aa36.36■■■■□ 3.41
U2AF1-206ENST00000464750 FAM196AQ6ZSG2 479 aa36.35■■■■□ 3.41
U2AF1-206ENST00000464750 OVOS2A0A0J9YW53 1432 aa36.32■■■■□ 3.4
U2AF1-206ENST00000464750 OVOS2Q6IE36 1432 aa36.32■■■■□ 3.4
U2AF1-206ENST00000464750 DISP2A7MBM2 1401 aa36.31■■■■□ 3.4
U2AF1-206ENST00000464750 TMF1P82094 1093 aa36.3■■■■□ 3.4
U2AF1-206ENST00000464750 TRIM37O94972 964 aa36.28■■■■□ 3.4
U2AF1-206ENST00000464750 CSB-PGBD3P0DP91 1061 aa36.28■■■■□ 3.4
U2AF1-206ENST00000464750 EN1Q05925 392 aaPredicted RBP36.26■■■■□ 3.4
U2AF1-206ENST00000464750 ANKRD36BQ8N2N9 1353 aa36.26■■■■□ 3.39
U2AF1-206ENST00000464750 PEAK1Q9H792 1746 aa36.25■■■■□ 3.39
U2AF1-206ENST00000464750 CARD10Q9BWT7 1032 aa36.23■■■■□ 3.39
U2AF1-206ENST00000464750 OVOS2A0A0G2JMS6 1433 aa36.21■■■■□ 3.39
U2AF1-206ENST00000464750 DDB1Q16531 1140 aa36.2■■■■□ 3.39
U2AF1-206ENST00000464750 CCDC7Q96M83 1385 aa36.18■■■■□ 3.38
U2AF1-206ENST00000464750 SBF2Q86WG5 1849 aa36.18■■■■□ 3.38
U2AF1-206ENST00000464750 ERBB3P21860 1342 aa36.18■■■■□ 3.38
U2AF1-206ENST00000464750 CDCA7Q9BWT1 371 aaPredicted RBP36.18■■■■□ 3.38
U2AF1-206ENST00000464750 MYOM1P52179 1685 aa36.18■■■■□ 3.38
U2AF1-206ENST00000464750 CDCA8Q53HL2 280 aa36.17■■■■□ 3.38
U2AF1-206ENST00000464750 CCER1Q8TC90 406 aaPredicted RBP36.17■■■■□ 3.38
U2AF1-206ENST00000464750 APBA3O96018 575 aa36.16■■■■□ 3.38
U2AF1-206ENST00000464750 SRCAPQ6ZRS2 3230 aa36.15■■■■□ 3.38
U2AF1-206ENST00000464750 EZH2Q15910 746 aaKnown RBP36.15■■■■□ 3.38
U2AF1-206ENST00000464750 COG3Q96JB2 828 aa36.15■■■■□ 3.38
U2AF1-206ENST00000464750 RREB1Q92766 1687 aa36.14■■■■□ 3.38
U2AF1-206ENST00000464750 C11orf95C9JLR9 678 aaPredicted RBP36.14■■■■□ 3.38
U2AF1-206ENST00000464750 KIF20BQ96Q89 1820 aa36.13■■■■□ 3.37
U2AF1-206ENST00000464750 CAMKK2Q96RR4 588 aa36.12■■■■□ 3.37
U2AF1-206ENST00000464750 PARD3Q8TEW0 1356 aa36.12■■■■□ 3.37
U2AF1-206ENST00000464750 FAM208AQ9UK61 1670 aaKnown RBP36.1■■■■□ 3.37
U2AF1-206ENST00000464750 ANKRD24Q8TF21 1146 aa36.1■■■■□ 3.37
U2AF1-206ENST00000464750 PSDA5PKW4 1024 aaPredicted RBP36.09■■■■□ 3.37
U2AF1-206ENST00000464750 NLRP2Q9NX02 1062 aa36.09■■■■□ 3.37
U2AF1-206ENST00000464750 TNS2Q63HR2 1409 aa36.08■■■■□ 3.37
U2AF1-206ENST00000464750 NUP188Q5SRE5 1749 aa36.08■■■■□ 3.37
U2AF1-206ENST00000464750 MARCH10Q8NA82 808 aaPredicted RBP36.06■■■■□ 3.36
U2AF1-206ENST00000464750 IP6K1Q92551 441 aa36.05■■■■□ 3.36
U2AF1-206ENST00000464750 MAP3K19Q56UN5 1328 aa36.05■■■■□ 3.36
U2AF1-206ENST00000464750 RGPD3A6NKT7 1758 aaPredicted RBP36.04■■■■□ 3.36
U2AF1-206ENST00000464750 RGPD4Q7Z3J3 1758 aa36.04■■■■□ 3.36
U2AF1-206ENST00000464750 BCL9O00512 1426 aa36.03■■■■□ 3.36
U2AF1-206ENST00000464750 GGNBP2Q9H3C7 697 aa36.03■■■■□ 3.36
U2AF1-206ENST00000464750 LRP5O75197 1615 aa36.02■■■■□ 3.36
U2AF1-206ENST00000464750 EXOC5O00471 708 aa36.02■■■■□ 3.36
U2AF1-206ENST00000464750 FYB1O15117 783 aa36.02■■■■□ 3.36
U2AF1-206ENST00000464750 FBLN1P23142 703 aa36■■■■□ 3.35
U2AF1-206ENST00000464750 R3HDM1Q15032 1099 aaKnown RBP35.99■■■■□ 3.35
U2AF1-206ENST00000464750 LTV1Q96GA3 475 aaPredicted RBP35.99■■■■□ 3.35
U2AF1-206ENST00000464750 IL2RBP14784 551 aa35.98■■■■□ 3.35
U2AF1-206ENST00000464750 AMPHP49418 695 aa35.98■■■■□ 3.35
U2AF1-206ENST00000464750 NSD3Q9BZ95 1437 aa35.98■■■■□ 3.35
U2AF1-206ENST00000464750 RGPD2P0DJD1 1756 aa35.97■■■■□ 3.35
U2AF1-206ENST00000464750 HOXC9P31274 260 aa35.97■■■■□ 3.35
U2AF1-206ENST00000464750 RTL1A6NKG5 1358 aa35.97■■■■□ 3.35
U2AF1-206ENST00000464750 BCL11BQ9C0K0 894 aaPredicted RBP35.95■■■■□ 3.35
U2AF1-206ENST00000464750 PTF1AQ7RTS3 328 aa35.94■■■■□ 3.34
U2AF1-206ENST00000464750 CARD14Q9BXL6 1004 aa35.94■■■■□ 3.34
U2AF1-206ENST00000464750 EIF4G2P78344 907 aaKnown RBP eCLIP35.93■■■■□ 3.34
U2AF1-206ENST00000464750 RRS1Q15050 365 aaKnown RBP35.93■■■■□ 3.34
U2AF1-206ENST00000464750 NHSQ6T4R5 1651 aa35.93■■■■□ 3.34
U2AF1-206ENST00000464750 HSPA5P11021 654 aaKnown RBP35.9■■■■□ 3.34
U2AF1-206ENST00000464750 POLR3GLQ9BT43 218 aa35.89■■■■□ 3.34
U2AF1-206ENST00000464750 PLSCR1O15162 318 aa35.88■■■■□ 3.33
U2AF1-206ENST00000464750 NBPF14Q5TI25 921 aa35.86■■■■□ 3.33
U2AF1-206ENST00000464750 SMG6Q86US8 1419 aaKnown RBP35.83■■■■□ 3.33
U2AF1-206ENST00000464750 KAT6BQ8WYB5 2073 aa35.83■■■■□ 3.33
U2AF1-206ENST00000464750 FLT4P35916 1363 aa35.81■■■■□ 3.32
U2AF1-206ENST00000464750 SHANK3Q9BYB0 1731 aa35.81■■■■□ 3.32
U2AF1-206ENST00000464750 ANKRD26Q9UPS8 1709 aa35.8■■■■□ 3.32
U2AF1-206ENST00000464750 KIF24Q5T7B8 1368 aa35.8■■■■□ 3.32
U2AF1-206ENST00000464750 KCNQ2O43526 872 aa35.8■■■■□ 3.32
U2AF1-206ENST00000464750 ACSBG1Q96GR2 724 aa35.8■■■■□ 3.32
U2AF1-206ENST00000464750 BTAF1O14981 1849 aa35.8■■■■□ 3.32
U2AF1-206ENST00000464750 MEGF6O75095 1541 aa35.79■■■■□ 3.32
U2AF1-206ENST00000464750 CGNL1Q0VF96 1302 aa35.79■■■■□ 3.32
U2AF1-206ENST00000464750 INSRP06213 1382 aa35.78■■■■□ 3.32
U2AF1-206ENST00000464750 HSP90AB2PQ58FF8 381 aa35.76■■■■□ 3.32
U2AF1-206ENST00000464750 MAP2P11137 1827 aaKnown RBP35.76■■■■□ 3.31
U2AF1-206ENST00000464750 NBPF6Q5VWK0 638 aa35.75■■■■□ 3.31
U2AF1-206ENST00000464750 NBPF4Q96M43 638 aa35.75■■■■□ 3.31
U2AF1-206ENST00000464750 DDX54Q8TDD1 881 aaKnown RBP35.74■■■■□ 3.31
U2AF1-206ENST00000464750 EMILIN1Q9Y6C2 1016 aa35.74■■■■□ 3.31
U2AF1-206ENST00000464750 PROM2Q8N271 834 aa35.73■■■■□ 3.31
U2AF1-206ENST00000464750 USHBP1Q8N6Y0 703 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms