RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
MCF2L2-206ENST00000464626 CD163L1Q9NR16 1453 aa27.59■■■□□ 2.01
MCF2L2-206ENST00000464626 ABCC6O95255 1503 aa27.59■■■□□ 2.01
MCF2L2-206ENST00000464626 TOM1L2Q6ZVM7 507 aa27.59■■■□□ 2.01
MCF2L2-206ENST00000464626 USP31Q70CQ4 1352 aa27.59■■■□□ 2.01
MCF2L2-206ENST00000464626 PEAK1Q9H792 1746 aa27.58■■■□□ 2.01
MCF2L2-206ENST00000464626 WNK3Q9BYP7 1800 aa27.58■■■□□ 2.01
MCF2L2-206ENST00000464626 PUS7Q96PZ0 661 aaKnown RBP27.58■■■□□ 2.01
MCF2L2-206ENST00000464626 LRRC37A3O60309 1634 aa27.58■■■□□ 2.01
MCF2L2-206ENST00000464626 RREB1Q92766 1687 aa27.58■■■□□ 2.01
MCF2L2-206ENST00000464626 RGPD5Q99666 1765 aa27.58■■■□□ 2
MCF2L2-206ENST00000464626 CDCA7Q9BWT1 371 aaPredicted RBP27.56■■■□□ 2
MCF2L2-206ENST00000464626 OVOS2A0A0G2JMS6 1433 aa27.56■■■□□ 2
MCF2L2-206ENST00000464626 OVOS2A0A0J9YW53 1432 aa27.56■■■□□ 2
MCF2L2-206ENST00000464626 OVOS2Q6IE36 1432 aa27.56■■■□□ 2
MCF2L2-206ENST00000464626 R3HDM1Q15032 1099 aaKnown RBP27.55■■■□□ 2
MCF2L2-206ENST00000464626 DDB1Q16531 1140 aa27.54■■■□□ 2
MCF2L2-206ENST00000464626 CARD10Q9BWT7 1032 aa27.53■■■□□ 2
MCF2L2-206ENST00000464626 SOX12O15370 315 aa27.52■■■□□ 2
MCF2L2-206ENST00000464626 HDGFL2Q7Z4V5 671 aaPredicted RBP27.52■■■□□ 2
MCF2L2-206ENST00000464626 SBF2Q86WG5 1849 aa27.52■■■□□ 2
MCF2L2-206ENST00000464626 NUP188Q5SRE5 1749 aa27.52■■■□□ 2
MCF2L2-206ENST00000464626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.51■■□□□ 1.99
MCF2L2-206ENST00000464626 TMC1Q8TDI8 760 aa27.51■■□□□ 1.99
MCF2L2-206ENST00000464626 EDC4Q6P2E9 1401 aaKnown RBP27.5■■□□□ 1.99
MCF2L2-206ENST00000464626 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
MCF2L2-206ENST00000464626 SLC12A5Q9H2X9 1139 aa27.5■■□□□ 1.99
MCF2L2-206ENST00000464626 BCL9O00512 1426 aa27.5■■□□□ 1.99
MCF2L2-206ENST00000464626 TERF2IPQ9NYB0 399 aa27.49■■□□□ 1.99
MCF2L2-206ENST00000464626 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
MCF2L2-206ENST00000464626 RGPD3A6NKT7 1758 aaPredicted RBP27.48■■□□□ 1.99
MCF2L2-206ENST00000464626 RGPD4Q7Z3J3 1758 aa27.48■■□□□ 1.99
MCF2L2-206ENST00000464626 CSB-PGBD3P0DP91 1061 aa27.48■■□□□ 1.99
MCF2L2-206ENST00000464626 NME9Q86XW9 330 aa27.48■■□□□ 1.99
MCF2L2-206ENST00000464626 SLC24A1O60721 1099 aa27.47■■□□□ 1.99
MCF2L2-206ENST00000464626 TESK2Q96S53 571 aa27.47■■□□□ 1.99
MCF2L2-206ENST00000464626 A0A1W2PP64 1363 aa27.47■■□□□ 1.99
MCF2L2-206ENST00000464626 NINLQ9Y2I6 1382 aa27.47■■□□□ 1.99
MCF2L2-206ENST00000464626 LTN1O94822 1766 aa27.45■■□□□ 1.98
MCF2L2-206ENST00000464626 PLSCR1O15162 318 aa27.44■■□□□ 1.98
MCF2L2-206ENST00000464626 NBPF14Q5TI25 921 aa27.44■■□□□ 1.98
MCF2L2-206ENST00000464626 MARCH10Q8NA82 808 aaPredicted RBP27.44■■□□□ 1.98
MCF2L2-206ENST00000464626 ST20-MTHFSA0A0A6YYL1 179 aa27.43■■□□□ 1.98
MCF2L2-206ENST00000464626 BCL11BQ9C0K0 894 aaPredicted RBP27.43■■□□□ 1.98
MCF2L2-206ENST00000464626 ERBB3P21860 1342 aa27.42■■□□□ 1.98
MCF2L2-206ENST00000464626 EXOC5O00471 708 aa27.4■■□□□ 1.98
MCF2L2-206ENST00000464626 TNS2Q63HR2 1409 aa27.39■■□□□ 1.97
MCF2L2-206ENST00000464626 PTF1AQ7RTS3 328 aa27.35■■□□□ 1.97
MCF2L2-206ENST00000464626 NLRP2Q9NX02 1062 aa27.34■■□□□ 1.97
MCF2L2-206ENST00000464626 ANKRD24Q8TF21 1146 aa27.33■■□□□ 1.97
MCF2L2-206ENST00000464626 IP6K1Q92551 441 aa27.32■■□□□ 1.96
MCF2L2-206ENST00000464626 IL2RBP14784 551 aa27.31■■□□□ 1.96
MCF2L2-206ENST00000464626 ANKRD36BQ8N2N9 1353 aa27.31■■□□□ 1.96
MCF2L2-206ENST00000464626 PROM2Q8N271 834 aa27.3■■□□□ 1.96
MCF2L2-206ENST00000464626 USP47Q96K76 1375 aa27.3■■□□□ 1.96
MCF2L2-206ENST00000464626 FAM208AQ9UK61 1670 aaKnown RBP27.3■■□□□ 1.96
MCF2L2-206ENST00000464626 COG3Q96JB2 828 aa27.29■■□□□ 1.96
MCF2L2-206ENST00000464626 NHSQ6T4R5 1651 aa27.28■■□□□ 1.96
MCF2L2-206ENST00000464626 TMF1P82094 1093 aa27.28■■□□□ 1.96
MCF2L2-206ENST00000464626 SPON1Q9HCB6 807 aa27.25■■□□□ 1.95
MCF2L2-206ENST00000464626 ANO8Q9HCE9 1232 aaPredicted RBP27.25■■□□□ 1.95
MCF2L2-206ENST00000464626 TIMELESSQ9UNS1 1208 aa27.25■■□□□ 1.95
MCF2L2-206ENST00000464626 TXNRD1Q16881 649 aa27.24■■□□□ 1.95
MCF2L2-206ENST00000464626 MAP3K19Q56UN5 1328 aa27.23■■□□□ 1.95
MCF2L2-206ENST00000464626 CASZ1Q86V15 1759 aa27.23■■□□□ 1.95
MCF2L2-206ENST00000464626 KCNQ2O43526 872 aa27.23■■□□□ 1.95
MCF2L2-206ENST00000464626 HOXC9P31274 260 aa27.21■■□□□ 1.95
MCF2L2-206ENST00000464626 CDCA8Q53HL2 280 aa27.21■■□□□ 1.95
MCF2L2-206ENST00000464626 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
MCF2L2-206ENST00000464626 FYB1O15117 783 aa27.19■■□□□ 1.94
MCF2L2-206ENST00000464626 RTL1A6NKG5 1358 aa27.19■■□□□ 1.94
MCF2L2-206ENST00000464626 AMPHP49418 695 aa27.18■■□□□ 1.94
MCF2L2-206ENST00000464626 KAT6BQ8WYB5 2073 aa27.18■■□□□ 1.94
MCF2L2-206ENST00000464626 LTV1Q96GA3 475 aaPredicted RBP27.17■■□□□ 1.94
MCF2L2-206ENST00000464626 ACSBG1Q96GR2 724 aa27.17■■□□□ 1.94
MCF2L2-206ENST00000464626 BTAF1O14981 1849 aa27.17■■□□□ 1.94
MCF2L2-206ENST00000464626 FBLN1P23142 703 aa27.16■■□□□ 1.94
MCF2L2-206ENST00000464626 STK32BQ9NY57 414 aa27.16■■□□□ 1.94
MCF2L2-206ENST00000464626 SLC15A2Q16348 729 aa27.15■■□□□ 1.94
MCF2L2-206ENST00000464626 RGPD2P0DJD1 1756 aa27.13■■□□□ 1.93
MCF2L2-206ENST00000464626 GGNBP2Q9H3C7 697 aa27.13■■□□□ 1.93
MCF2L2-206ENST00000464626 PPP1R1BQ9UD71 204 aaPredicted RBP27.13■■□□□ 1.93
MCF2L2-206ENST00000464626 KIF20BQ96Q89 1820 aa27.13■■□□□ 1.93
MCF2L2-206ENST00000464626 PAPPAQ13219 1627 aa27.12■■□□□ 1.93
MCF2L2-206ENST00000464626 PDGFDQ9GZP0 370 aaPredicted RBP27.11■■□□□ 1.93
MCF2L2-206ENST00000464626 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
MCF2L2-206ENST00000464626 MYOM1P52179 1685 aa27.1■■□□□ 1.93
MCF2L2-206ENST00000464626 KIF24Q5T7B8 1368 aa27.09■■□□□ 1.93
MCF2L2-206ENST00000464626 DDX54Q8TDD1 881 aaKnown RBP27.09■■□□□ 1.93
MCF2L2-206ENST00000464626 SHANK3Q9BYB0 1731 aa27.08■■□□□ 1.93
MCF2L2-206ENST00000464626 MEGF6O75095 1541 aa27.07■■□□□ 1.92
MCF2L2-206ENST00000464626 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
MCF2L2-206ENST00000464626 ZCRB1Q8TBF4 217 aaKnown RBP27.06■■□□□ 1.92
MCF2L2-206ENST00000464626 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
MCF2L2-206ENST00000464626 CGNL1Q0VF96 1302 aa27.06■■□□□ 1.92
MCF2L2-206ENST00000464626 SMG6Q86US8 1419 aaKnown RBP27.06■■□□□ 1.92
MCF2L2-206ENST00000464626 ZBTB7AO95365 584 aa27.05■■□□□ 1.92
MCF2L2-206ENST00000464626 PTGER2P43116 358 aa27.05■■□□□ 1.92
MCF2L2-206ENST00000464626 CARD14Q9BXL6 1004 aa27.05■■□□□ 1.92
MCF2L2-206ENST00000464626 INSRP06213 1382 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms