RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 TSC1Q92574 1164 aa8.91□□□□□ -0.98
PTPN12-210ENST00000464313 KDM4CQ9H3R0 1056 aa8.91□□□□□ -0.98
PTPN12-210ENST00000464313 SOS2Q07890 1332 aaPredicted RBP8.9□□□□□ -0.98
PTPN12-210ENST00000464313 UPP2O95045 317 aa8.9□□□□□ -0.98
PTPN12-210ENST00000464313 SLURP2P0DP57 97 aa8.9□□□□□ -0.98
PTPN12-210ENST00000464313 DIXDC1Q155Q3 683 aa8.9□□□□□ -0.98
PTPN12-210ENST00000464313 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.98
PTPN12-210ENST00000464313 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.98
PTPN12-210ENST00000464313 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
PTPN12-210ENST00000464313 MEIOBQ8N635 442 aa8.89□□□□□ -0.99
PTPN12-210ENST00000464313 NANOS1Q8WY41 292 aaKnown RBP8.89□□□□□ -0.99
PTPN12-210ENST00000464313 PLA2G4EQ3MJ16 856 aa8.88□□□□□ -0.99
PTPN12-210ENST00000464313 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
PTPN12-210ENST00000464313 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
PTPN12-210ENST00000464313 LIMD1Q9UGP4 676 aa8.88□□□□□ -0.99
PTPN12-210ENST00000464313 FSHRP23945 695 aa8.87□□□□□ -0.99
PTPN12-210ENST00000464313 QPCTQ16769 361 aa8.87□□□□□ -0.99
PTPN12-210ENST00000464313 C1QTNF2Q9BXJ5 285 aa8.87□□□□□ -0.99
PTPN12-210ENST00000464313 NUTM2BA6NNL0 878 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-210ENST00000464313 NUTM2EB1AL46 878 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-210ENST00000464313 PTSQ03393 145 aa8.85□□□□□ -0.99
PTPN12-210ENST00000464313 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.85□□□□□ -0.99
PTPN12-210ENST00000464313 NUTM2DQ5VT03 806 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-210ENST00000464313 VASH1Q7L8A9 365 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-210ENST00000464313 NUTM2AQ8IVF1 878 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-210ENST00000464313 MAGEB6P1A0A0J9YX57 407 aa8.84□□□□□ -0.99
PTPN12-210ENST00000464313 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
PTPN12-210ENST00000464313 Q8N3U1 123 aa8.84□□□□□ -0.99
PTPN12-210ENST00000464313 MYSM1Q5VVJ2 828 aa8.83□□□□□ -1
PTPN12-210ENST00000464313 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
PTPN12-210ENST00000464313 IL27Q8NEV9 243 aa8.83□□□□□ -1
PTPN12-210ENST00000464313 FAM117AQ9C073 453 aa8.83□□□□□ -1
PTPN12-210ENST00000464313 FIGNL2A6NMB9 653 aa8.82□□□□□ -1
PTPN12-210ENST00000464313 LILRB3O75022 631 aa8.82□□□□□ -1
PTPN12-210ENST00000464313 TMEM132AQ24JP5 1023 aa8.82□□□□□ -1
PTPN12-210ENST00000464313 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
PTPN12-210ENST00000464313 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
PTPN12-210ENST00000464313 ARMC2Q8NEN0 867 aa8.82□□□□□ -1
PTPN12-210ENST00000464313 CARD14Q9BXL6 1004 aa8.82□□□□□ -1
PTPN12-210ENST00000464313 ITGB2P05107 769 aa8.81□□□□□ -1
PTPN12-210ENST00000464313 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
PTPN12-210ENST00000464313 DCAF5Q96JK2 942 aa8.81□□□□□ -1
PTPN12-210ENST00000464313 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
PTPN12-210ENST00000464313 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
PTPN12-210ENST00000464313 TTLL8A6PVC2 850 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 PROCP04070 461 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 CBLBQ13191 982 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 NBPF14Q5TI25 921 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
PTPN12-210ENST00000464313 CCDC116Q8IYX3 515 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 GALNT6Q8NCL4 622 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
PTPN12-210ENST00000464313 K7ELQ4 463 aaPredicted RBP8.79□□□□□ -1
PTPN12-210ENST00000464313 LYPD4Q6UWN0 246 aa8.79□□□□□ -1
PTPN12-210ENST00000464313 VWA5B2Q8N398 1253 aa8.79□□□□□ -1
PTPN12-210ENST00000464313 MAP3K10Q02779 954 aa8.78□□□□□ -1
PTPN12-210ENST00000464313 ADAMTS2O95450 1211 aa8.77□□□□□ -1.01
PTPN12-210ENST00000464313 TUSC1Q2TAM9 212 aa8.77□□□□□ -1.01
PTPN12-210ENST00000464313 ERFEQ4G0M1 354 aa8.77□□□□□ -1.01
PTPN12-210ENST00000464313 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-210ENST00000464313 SV2AQ7L0J3 742 aa8.77□□□□□ -1.01
PTPN12-210ENST00000464313 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-210ENST00000464313 CDC14CA4D256 554 aa8.76□□□□□ -1.01
PTPN12-210ENST00000464313 PHF20L1A8MW92 1017 aa8.76□□□□□ -1.01
PTPN12-210ENST00000464313 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
PTPN12-210ENST00000464313 ITGA6P23229 1130 aa8.75□□□□□ -1.01
PTPN12-210ENST00000464313 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
PTPN12-210ENST00000464313 CELA2BP08218 269 aaPredicted RBP8.74□□□□□ -1.01
PTPN12-210ENST00000464313 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
PTPN12-210ENST00000464313 ENAMQ9NRM1 1142 aa8.74□□□□□ -1.01
PTPN12-210ENST00000464313 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
PTPN12-210ENST00000464313 CNTNAP5Q8WYK1 1306 aa8.74□□□□□ -1.01
PTPN12-210ENST00000464313 SPINT1O43278 529 aa8.73□□□□□ -1.01
PTPN12-210ENST00000464313 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
PTPN12-210ENST00000464313 CTDSPL2Q05D32 466 aa8.73□□□□□ -1.01
PTPN12-210ENST00000464313 Q6ZVU0 165 aa8.73□□□□□ -1.01
PTPN12-210ENST00000464313 POLR3EQ9NVU0 708 aa8.73□□□□□ -1.01
PTPN12-210ENST00000464313 SRSF11Q05519 484 aaKnown RBP8.72□□□□□ -1.01
PTPN12-210ENST00000464313 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.02
PTPN12-210ENST00000464313 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.026e-8■■■□□ 16.5
PTPN12-210ENST00000464313 KCTD15Q96SI1 283 aaPredicted RBP8.71□□□□□ -1.02
PTPN12-210ENST00000464313 ARHGAP9Q9BRR9 750 aa8.71□□□□□ -1.02
PTPN12-210ENST00000464313 RELBQ01201 579 aa8.7□□□□□ -1.02
PTPN12-210ENST00000464313 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
PTPN12-210ENST00000464313 LRRN4Q8WUT4 740 aa8.7□□□□□ -1.02
PTPN12-210ENST00000464313 INSM2Q96T92 566 aaPredicted RBP8.7□□□□□ -1.02
PTPN12-210ENST00000464313 SLC10A4Q96EP9 437 aa8.69□□□□□ -1.02
PTPN12-210ENST00000464313 BAG6P46379 1132 aa8.68□□□□□ -1.02
PTPN12-210ENST00000464313 INTS6LQ5JSJ4 861 aaKnown RBP8.68□□□□□ -1.02
PTPN12-210ENST00000464313 PDXDC2PQ6P474 469 aa8.68□□□□□ -1.02
PTPN12-210ENST00000464313 FKBPLQ9UIM3 349 aa8.68□□□□□ -1.02
PTPN12-210ENST00000464313 LCE3BQ5TA77 95 aa8.67□□□□□ -1.02
PTPN12-210ENST00000464313 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-210ENST00000464313 PODNQ7Z5L7 613 aa8.67□□□□□ -1.02
PTPN12-210ENST00000464313 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
PTPN12-210ENST00000464313 ZNF395Q9H8N7 513 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-210ENST00000464313 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-210ENST00000464313 NR6A1Q15406 480 aa8.66□□□□□ -1.02
PTPN12-210ENST00000464313 OCSTAMPQ9BR26 566 aa8.66□□□□□ -1.02
PTPN12-210ENST00000464313 TMPRSS4Q9NRS4 437 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms