RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
CTDSP1-206ENST00000464255 EDC4Q6P2E9 1401 aaKnown RBP18.45■□□□□ 0.54
CTDSP1-206ENST00000464255 WDR17Q8IZU2 1322 aa18.45■□□□□ 0.54
CTDSP1-206ENST00000464255 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
CTDSP1-206ENST00000464255 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
CTDSP1-206ENST00000464255 EN1Q05925 392 aaPredicted RBP18.44■□□□□ 0.54
CTDSP1-206ENST00000464255 DISP2A7MBM2 1401 aa18.43■□□□□ 0.54
CTDSP1-206ENST00000464255 TRIM37O94972 964 aa18.43■□□□□ 0.54
CTDSP1-206ENST00000464255 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
CTDSP1-206ENST00000464255 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
CTDSP1-206ENST00000464255 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
CTDSP1-206ENST00000464255 BAG6P46379 1132 aa18.42■□□□□ 0.54
CTDSP1-206ENST00000464255 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
CTDSP1-206ENST00000464255 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
CTDSP1-206ENST00000464255 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
CTDSP1-206ENST00000464255 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
CTDSP1-206ENST00000464255 OVOS2A0A0J9YW53 1432 aa18.4■□□□□ 0.54
CTDSP1-206ENST00000464255 OVOS2Q6IE36 1432 aa18.4■□□□□ 0.54
CTDSP1-206ENST00000464255 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
CTDSP1-206ENST00000464255 PARP4Q9UKK3 1724 aaKnown RBP18.4■□□□□ 0.54
CTDSP1-206ENST00000464255 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
CTDSP1-206ENST00000464255 ABCC6O95255 1503 aa18.39■□□□□ 0.53
CTDSP1-206ENST00000464255 TMF1P82094 1093 aa18.38■□□□□ 0.53
CTDSP1-206ENST00000464255 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-206ENST00000464255 ANKRD36BQ8N2N9 1353 aa18.37■□□□□ 0.53
CTDSP1-206ENST00000464255 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
CTDSP1-206ENST00000464255 APBA3O96018 575 aa18.36■□□□□ 0.53
CTDSP1-206ENST00000464255 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
CTDSP1-206ENST00000464255 FBLN1P23142 703 aa18.36■□□□□ 0.53
CTDSP1-206ENST00000464255 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
CTDSP1-206ENST00000464255 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
CTDSP1-206ENST00000464255 ERBB3P21860 1342 aa18.35■□□□□ 0.53
CTDSP1-206ENST00000464255 DDB1Q16531 1140 aa18.35■□□□□ 0.53
CTDSP1-206ENST00000464255 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
CTDSP1-206ENST00000464255 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-206ENST00000464255 FYB1O15117 783 aa18.34■□□□□ 0.53
CTDSP1-206ENST00000464255 PSDA5PKW4 1024 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-206ENST00000464255 IP6K1Q92551 441 aa18.33■□□□□ 0.52
CTDSP1-206ENST00000464255 ANKRD24Q8TF21 1146 aa18.32■□□□□ 0.52
CTDSP1-206ENST00000464255 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
CTDSP1-206ENST00000464255 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
CTDSP1-206ENST00000464255 LTN1O94822 1766 aa18.32■□□□□ 0.52
CTDSP1-206ENST00000464255 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
CTDSP1-206ENST00000464255 BCL9O00512 1426 aa18.32■□□□□ 0.52
CTDSP1-206ENST00000464255 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
CTDSP1-206ENST00000464255 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
CTDSP1-206ENST00000464255 COG3Q96JB2 828 aa18.31■□□□□ 0.52
CTDSP1-206ENST00000464255 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
CTDSP1-206ENST00000464255 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-206ENST00000464255 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
CTDSP1-206ENST00000464255 EXOC5O00471 708 aa18.29■□□□□ 0.52
CTDSP1-206ENST00000464255 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
CTDSP1-206ENST00000464255 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
CTDSP1-206ENST00000464255 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-206ENST00000464255 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-206ENST00000464255 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-206ENST00000464255 SBF2Q86WG5 1849 aa18.28■□□□□ 0.52
CTDSP1-206ENST00000464255 HOXC9P31274 260 aa18.27■□□□□ 0.52
CTDSP1-206ENST00000464255 PROM2Q8N271 834 aa18.26■□□□□ 0.51
CTDSP1-206ENST00000464255 MYOM1P52179 1685 aa18.25■□□□□ 0.51
CTDSP1-206ENST00000464255 TNS2Q63HR2 1409 aa18.25■□□□□ 0.51
CTDSP1-206ENST00000464255 PLSCR1O15162 318 aa18.25■□□□□ 0.51
CTDSP1-206ENST00000464255 IL2RBP14784 551 aa18.25■□□□□ 0.51
CTDSP1-206ENST00000464255 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
CTDSP1-206ENST00000464255 RREB1Q92766 1687 aa18.25■□□□□ 0.51
CTDSP1-206ENST00000464255 LTV1Q96GA3 475 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-206ENST00000464255 KCNQ2O43526 872 aa18.23■□□□□ 0.51
CTDSP1-206ENST00000464255 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
CTDSP1-206ENST00000464255 AMPHP49418 695 aa18.22■□□□□ 0.51
CTDSP1-206ENST00000464255 NUP188Q5SRE5 1749 aa18.22■□□□□ 0.51
CTDSP1-206ENST00000464255 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
CTDSP1-206ENST00000464255 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
CTDSP1-206ENST00000464255 LRP5O75197 1615 aa18.2■□□□□ 0.5
CTDSP1-206ENST00000464255 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
CTDSP1-206ENST00000464255 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
CTDSP1-206ENST00000464255 NBPF6Q5VWK0 638 aa18.19■□□□□ 0.5
CTDSP1-206ENST00000464255 NBPF4Q96M43 638 aa18.19■□□□□ 0.5
CTDSP1-206ENST00000464255 FAM208AQ9UK61 1670 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-206ENST00000464255 RGPD3A6NKT7 1758 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-206ENST00000464255 RGPD4Q7Z3J3 1758 aa18.17■□□□□ 0.5
CTDSP1-206ENST00000464255 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
CTDSP1-206ENST00000464255 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
CTDSP1-206ENST00000464255 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-206ENST00000464255 RGPD2P0DJD1 1756 aa18.17■□□□□ 0.5
CTDSP1-206ENST00000464255 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
CTDSP1-206ENST00000464255 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
CTDSP1-206ENST00000464255 INSRP06213 1382 aa18.15■□□□□ 0.5
CTDSP1-206ENST00000464255 MEGF6O75095 1541 aa18.14■□□□□ 0.49
CTDSP1-206ENST00000464255 TXNRD1Q16881 649 aa18.14■□□□□ 0.49
CTDSP1-206ENST00000464255 USHBP1Q8N6Y0 703 aa18.14■□□□□ 0.49
CTDSP1-206ENST00000464255 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
CTDSP1-206ENST00000464255 KIF24Q5T7B8 1368 aa18.14■□□□□ 0.49
CTDSP1-206ENST00000464255 NHSQ6T4R5 1651 aa18.13■□□□□ 0.49
CTDSP1-206ENST00000464255 FLT4P35916 1363 aa18.13■□□□□ 0.49
CTDSP1-206ENST00000464255 ZCRB1Q8TBF4 217 aaKnown RBP18.12■□□□□ 0.49
CTDSP1-206ENST00000464255 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
CTDSP1-206ENST00000464255 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-206ENST00000464255 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
CTDSP1-206ENST00000464255 PANK3Q9H999 370 aa18.11■□□□□ 0.49
CTDSP1-206ENST00000464255 POLKQ9UBT6 870 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms