RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 WDR4P57081 412 aaKnown RBP13.52□□□□□ -0.25
CCDC144A-211ENST00000463809 GDPD2Q9HCC8 539 aa13.52□□□□□ -0.25
CCDC144A-211ENST00000463809 IRF5Q13568 498 aa13.51□□□□□ -0.25
CCDC144A-211ENST00000463809 NBPF20Q3BBV1 942 aa13.5□□□□□ -0.25
CCDC144A-211ENST00000463809 CCDC116Q8IYX3 515 aa13.5□□□□□ -0.25
CCDC144A-211ENST00000463809 ITPKCQ96DU7 683 aa13.5□□□□□ -0.25
CCDC144A-211ENST00000463809 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
CCDC144A-211ENST00000463809 POTECB2RU33 542 aa13.49□□□□□ -0.25
CCDC144A-211ENST00000463809 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
CCDC144A-211ENST00000463809 ZFAND3Q9H8U3 227 aa13.49□□□□□ -0.25
CCDC144A-211ENST00000463809 PCDHB9Q9Y5E1 797 aa13.49□□□□□ -0.25
CCDC144A-211ENST00000463809 ZIC2O95409 532 aaPredicted RBP13.48□□□□□ -0.25
CCDC144A-211ENST00000463809 FLIIQ13045 1269 aa13.48□□□□□ -0.25
CCDC144A-211ENST00000463809 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
CCDC144A-211ENST00000463809 ESPNB1AK53 854 aa13.46□□□□□ -0.25
CCDC144A-211ENST00000463809 ABL2P42684 1182 aa13.46□□□□□ -0.25
CCDC144A-211ENST00000463809 PPP1R26Q5T8A7 1209 aaPredicted RBP13.46□□□□□ -0.25
CCDC144A-211ENST00000463809 ZNF787Q6DD87 383 aa13.46□□□□□ -0.25
CCDC144A-211ENST00000463809 GMPR2Q9P2T1 348 aaKnown RBP13.46□□□□□ -0.25
CCDC144A-211ENST00000463809 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
CCDC144A-211ENST00000463809 BMP1P13497 986 aa13.45□□□□□ -0.26
CCDC144A-211ENST00000463809 TRIM46Q7Z4K8 759 aa13.45□□□□□ -0.26
CCDC144A-211ENST00000463809 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
CCDC144A-211ENST00000463809 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
CCDC144A-211ENST00000463809 MCCD1P59942 119 aaPredicted RBP13.42□□□□□ -0.26
CCDC144A-211ENST00000463809 DHX9Q08211 1270 aaKnown RBP13.42□□□□□ -0.26
CCDC144A-211ENST00000463809 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
CCDC144A-211ENST00000463809 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
CCDC144A-211ENST00000463809 RAB15P59190 212 aa13.4□□□□□ -0.26
CCDC144A-211ENST00000463809 ZNF592Q92610 1267 aa13.4□□□□□ -0.26
CCDC144A-211ENST00000463809 PGPEP1Q9NXJ5 209 aa13.4□□□□□ -0.26
CCDC144A-211ENST00000463809 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
CCDC144A-211ENST00000463809 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
CCDC144A-211ENST00000463809 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
CCDC144A-211ENST00000463809 UBTFP17480 764 aaKnown RBP13.38□□□□□ -0.27
CCDC144A-211ENST00000463809 MEIOBQ8N635 442 aa13.38□□□□□ -0.27
CCDC144A-211ENST00000463809 TMPRSS4Q9NRS4 437 aa13.38□□□□□ -0.27
CCDC144A-211ENST00000463809 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
CCDC144A-211ENST00000463809 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
CCDC144A-211ENST00000463809 SENP2Q9HC62 589 aa13.37□□□□□ -0.27
CCDC144A-211ENST00000463809 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
CCDC144A-211ENST00000463809 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC144A-211ENST00000463809 CBLBQ13191 982 aa13.35□□□□□ -0.27
CCDC144A-211ENST00000463809 Q6ZVU0 165 aa13.35□□□□□ -0.27
CCDC144A-211ENST00000463809 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
CCDC144A-211ENST00000463809 ZFP42Q96MM3 310 aa13.35□□□□□ -0.27
CCDC144A-211ENST00000463809 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
CCDC144A-211ENST00000463809 RAD21O60216 631 aa13.34□□□□□ -0.27
CCDC144A-211ENST00000463809 LILRA1O75019 489 aa13.33□□□□□ -0.28
CCDC144A-211ENST00000463809 SNRPBP14678 240 aaKnown RBP13.33□□□□□ -0.28
CCDC144A-211ENST00000463809 RNF20Q5VTR2 975 aa13.33□□□□□ -0.28
CCDC144A-211ENST00000463809 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
CCDC144A-211ENST00000463809 PURBQ96QR8 312 aaKnown RBP13.33□□□□□ -0.28
CCDC144A-211ENST00000463809 SCARF1Q14162 830 aa13.32□□□□□ -0.28
CCDC144A-211ENST00000463809 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
CCDC144A-211ENST00000463809 LINC00528Q8N1L1 170 aa13.32□□□□□ -0.28
CCDC144A-211ENST00000463809 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
CCDC144A-211ENST00000463809 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
CCDC144A-211ENST00000463809 TSEN34Q9BSV6 310 aaKnown RBP13.29□□□□□ -0.28
CCDC144A-211ENST00000463809 UPP2O95045 317 aa13.28□□□□□ -0.28
CCDC144A-211ENST00000463809 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
CCDC144A-211ENST00000463809 CYLDQ9NQC7 956 aa13.28□□□□□ -0.28
CCDC144A-211ENST00000463809 BMP2P12643 396 aa13.27□□□□□ -0.29
CCDC144A-211ENST00000463809 SOX11P35716 441 aa13.27□□□□□ -0.29
CCDC144A-211ENST00000463809 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
CCDC144A-211ENST00000463809 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
CCDC144A-211ENST00000463809 AGBL1Q96MI9 1066 aa13.26□□□□□ -0.29
CCDC144A-211ENST00000463809 PCDHB11Q9Y5F2 797 aa13.26□□□□□ -0.29
CCDC144A-211ENST00000463809 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
CCDC144A-211ENST00000463809 KDF1Q8NAX2 398 aaPredicted RBP13.25□□□□□ -0.29
CCDC144A-211ENST00000463809 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
CCDC144A-211ENST00000463809 ADH1AP07327 375 aa13.24□□□□□ -0.29
CCDC144A-211ENST00000463809 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
CCDC144A-211ENST00000463809 SCTRP47872 440 aa13.23□□□□□ -0.29
CCDC144A-211ENST00000463809 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
CCDC144A-211ENST00000463809 ALG2Q9H553 416 aa13.23□□□□□ -0.29
CCDC144A-211ENST00000463809 POM121CA8CG34 1229 aa13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 SPINT1O43278 529 aa13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 RELBQ01201 579 aa13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 TSGA10IPQ3SY00 556 aa13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 ZNF775Q96BV0 537 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-211ENST00000463809 SOS2Q07890 1332 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-211ENST00000463809 RNF135Q8IUD6 432 aa13.21□□□□□ -0.29
CCDC144A-211ENST00000463809 CDCA7Q9BWT1 371 aaPredicted RBP13.21□□□□□ -0.29
CCDC144A-211ENST00000463809 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
CCDC144A-211ENST00000463809 PTGIRP43119 386 aa13.19□□□□□ -0.3
CCDC144A-211ENST00000463809 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
CCDC144A-211ENST00000463809 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
CCDC144A-211ENST00000463809 A6NJR5 290 aa13.18□□□□□ -0.3
CCDC144A-211ENST00000463809 SOBPA7XYQ1 873 aa13.18□□□□□ -0.3
CCDC144A-211ENST00000463809 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
CCDC144A-211ENST00000463809 TRAK2O60296 914 aa13.17□□□□□ -0.3
CCDC144A-211ENST00000463809 INSM2Q96T92 566 aaPredicted RBP13.17□□□□□ -0.3
CCDC144A-211ENST00000463809 OSBPL3Q9H4L5 887 aa13.17□□□□□ -0.3
CCDC144A-211ENST00000463809 TTLL8A6PVC2 850 aa13.16□□□□□ -0.3
CCDC144A-211ENST00000463809 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
CCDC144A-211ENST00000463809 DNMT3LQ9UJW3 386 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms