RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 MARCH10Q8NA82 808 aaPredicted RBP21.85■■□□□ 1.09
CMSS1-202ENST00000463526 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
CMSS1-202ENST00000463526 PARP4Q9UKK3 1724 aaKnown RBP21.85■■□□□ 1.09
CMSS1-202ENST00000463526 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
CMSS1-202ENST00000463526 TTC21AQ8NDW8 1320 aa21.84■■□□□ 1.09
CMSS1-202ENST00000463526 RREB1Q92766 1687 aa21.82■■□□□ 1.08
CMSS1-202ENST00000463526 CDCA7Q9BWT1 371 aaPredicted RBP21.82■■□□□ 1.08
CMSS1-202ENST00000463526 CARD10Q9BWT7 1032 aa21.82■■□□□ 1.08
CMSS1-202ENST00000463526 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
CMSS1-202ENST00000463526 PPP1R1BQ9UD71 204 aaPredicted RBP21.82■■□□□ 1.08
CMSS1-202ENST00000463526 NUP188Q5SRE5 1749 aa21.82■■□□□ 1.08
CMSS1-202ENST00000463526 COL18A1P39060 1754 aa21.82■■□□□ 1.08
CMSS1-202ENST00000463526 PLSCR1O15162 318 aa21.81■■□□□ 1.08
CMSS1-202ENST00000463526 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
CMSS1-202ENST00000463526 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
CMSS1-202ENST00000463526 SPON1Q9HCB6 807 aa21.81■■□□□ 1.08
CMSS1-202ENST00000463526 EXOC5O00471 708 aa21.8■■□□□ 1.08
CMSS1-202ENST00000463526 KCNQ2O43526 872 aa21.8■■□□□ 1.08
CMSS1-202ENST00000463526 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
CMSS1-202ENST00000463526 ANO8Q9HCE9 1232 aaPredicted RBP21.79■■□□□ 1.08
CMSS1-202ENST00000463526 NME9Q86XW9 330 aa21.78■■□□□ 1.08
CMSS1-202ENST00000463526 PEAK1Q9H792 1746 aa21.77■■□□□ 1.08
CMSS1-202ENST00000463526 PROM2Q8N271 834 aa21.76■■□□□ 1.07
CMSS1-202ENST00000463526 NLRP2Q9NX02 1062 aa21.76■■□□□ 1.07
CMSS1-202ENST00000463526 AKAP12Q02952 1782 aa21.75■■□□□ 1.07
CMSS1-202ENST00000463526 SLC12A5Q9H2X9 1139 aa21.75■■□□□ 1.07
CMSS1-202ENST00000463526 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
CMSS1-202ENST00000463526 HDGFL2Q7Z4V5 671 aaPredicted RBP21.74■■□□□ 1.07
CMSS1-202ENST00000463526 PDGFDQ9GZP0 370 aaPredicted RBP21.74■■□□□ 1.07
CMSS1-202ENST00000463526 NFAT5O94916 1531 aa21.74■■□□□ 1.07
CMSS1-202ENST00000463526 CCDC7Q96M83 1385 aa21.74■■□□□ 1.07
CMSS1-202ENST00000463526 SBF2Q86WG5 1849 aa21.72■■□□□ 1.07
CMSS1-202ENST00000463526 TXNRD1Q16881 649 aa21.72■■□□□ 1.07
CMSS1-202ENST00000463526 ACSBG1Q96GR2 724 aa21.72■■□□□ 1.07
CMSS1-202ENST00000463526 ZBTB7AO95365 584 aa21.71■■□□□ 1.07
CMSS1-202ENST00000463526 USP31Q70CQ4 1352 aa21.71■■□□□ 1.07
CMSS1-202ENST00000463526 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
CMSS1-202ENST00000463526 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
CMSS1-202ENST00000463526 BCL9O00512 1426 aa21.7■■□□□ 1.06
CMSS1-202ENST00000463526 YY1P25490 414 aa21.69■■□□□ 1.06
CMSS1-202ENST00000463526 ANKRD24Q8TF21 1146 aa21.69■■□□□ 1.06
CMSS1-202ENST00000463526 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
CMSS1-202ENST00000463526 ERBB3P21860 1342 aa21.69■■□□□ 1.06
CMSS1-202ENST00000463526 TONSLQ96HA7 1378 aa21.69■■□□□ 1.06
CMSS1-202ENST00000463526 CD163L1Q9NR16 1453 aa21.69■■□□□ 1.06
CMSS1-202ENST00000463526 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
CMSS1-202ENST00000463526 TERF2IPQ9NYB0 399 aa21.68■■□□□ 1.06
CMSS1-202ENST00000463526 WNK3Q9BYP7 1800 aa21.68■■□□□ 1.06
CMSS1-202ENST00000463526 IL2RBP14784 551 aa21.67■■□□□ 1.06
CMSS1-202ENST00000463526 TNS2Q63HR2 1409 aa21.66■■□□□ 1.06
CMSS1-202ENST00000463526 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
CMSS1-202ENST00000463526 MON2Q7Z3U7 1717 aa21.66■■□□□ 1.06
CMSS1-202ENST00000463526 SLC15A2Q16348 729 aa21.65■■□□□ 1.06
CMSS1-202ENST00000463526 RGPD3A6NKT7 1758 aaPredicted RBP21.64■■□□□ 1.06
CMSS1-202ENST00000463526 RGPD4Q7Z3J3 1758 aa21.64■■□□□ 1.06
CMSS1-202ENST00000463526 A0A1W2PP64 1363 aa21.64■■□□□ 1.06
CMSS1-202ENST00000463526 NINLQ9Y2I6 1382 aa21.64■■□□□ 1.06
CMSS1-202ENST00000463526 EDC4Q6P2E9 1401 aaKnown RBP21.63■■□□□ 1.05
CMSS1-202ENST00000463526 ABCC6O95255 1503 aa21.62■■□□□ 1.05
CMSS1-202ENST00000463526 ST20-MTHFSA0A0A6YYL1 179 aa21.6■■□□□ 1.05
CMSS1-202ENST00000463526 PTGER2P43116 358 aa21.6■■□□□ 1.05
CMSS1-202ENST00000463526 DDX54Q8TDD1 881 aaKnown RBP21.6■■□□□ 1.05
CMSS1-202ENST00000463526 IP6K1Q92551 441 aa21.6■■□□□ 1.05
CMSS1-202ENST00000463526 FBLN1P23142 703 aa21.59■■□□□ 1.05
CMSS1-202ENST00000463526 CASZ1Q86V15 1759 aa21.59■■□□□ 1.05
CMSS1-202ENST00000463526 COG3Q96JB2 828 aa21.58■■□□□ 1.05
CMSS1-202ENST00000463526 PUS7Q96PZ0 661 aaKnown RBP21.58■■□□□ 1.05
CMSS1-202ENST00000463526 LTN1O94822 1766 aa21.57■■□□□ 1.04
CMSS1-202ENST00000463526 TESK2Q96S53 571 aa21.57■■□□□ 1.04
CMSS1-202ENST00000463526 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
CMSS1-202ENST00000463526 AMPHP49418 695 aa21.56■■□□□ 1.04
CMSS1-202ENST00000463526 MTFR1LQ9H019 292 aa21.56■■□□□ 1.04
CMSS1-202ENST00000463526 FHDC1Q9C0D6 1143 aaPredicted RBP21.55■■□□□ 1.04
CMSS1-202ENST00000463526 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
CMSS1-202ENST00000463526 SYTL4Q96C24 671 aaPredicted RBP21.54■■□□□ 1.04
CMSS1-202ENST00000463526 MAP3K19Q56UN5 1328 aa21.54■■□□□ 1.04
CMSS1-202ENST00000463526 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
CMSS1-202ENST00000463526 HOXC9P31274 260 aa21.53■■□□□ 1.04
CMSS1-202ENST00000463526 ZNF827Q17R98 1081 aa21.53■■□□□ 1.04
CMSS1-202ENST00000463526 SYT17Q9BSW7 474 aa21.53■■□□□ 1.04
CMSS1-202ENST00000463526 LRRC4BQ9NT99 713 aa21.53■■□□□ 1.04
CMSS1-202ENST00000463526 MYOM1P52179 1685 aa21.51■■□□□ 1.03
CMSS1-202ENST00000463526 PRIM1P49642 420 aaKnown RBP21.5■■□□□ 1.03
CMSS1-202ENST00000463526 KCNQ4P56696 695 aa21.5■■□□□ 1.03
CMSS1-202ENST00000463526 RRS1Q15050 365 aaKnown RBP21.49■■□□□ 1.03
CMSS1-202ENST00000463526 ARXQ96QS3 562 aa21.49■■□□□ 1.03
CMSS1-202ENST00000463526 SGIP1Q9BQI5 828 aa21.49■■□□□ 1.03
CMSS1-202ENST00000463526 ZCRB1Q8TBF4 217 aaKnown RBP21.48■■□□□ 1.03
CMSS1-202ENST00000463526 GGNBP2Q9H3C7 697 aa21.48■■□□□ 1.03
CMSS1-202ENST00000463526 BTAF1O14981 1849 aa21.48■■□□□ 1.03
CMSS1-202ENST00000463526 SLC24A1O60721 1099 aa21.47■■□□□ 1.03
CMSS1-202ENST00000463526 KLHL34Q8N239 644 aa21.46■■□□□ 1.03
CMSS1-202ENST00000463526 USHBP1Q8N6Y0 703 aa21.46■■□□□ 1.03
CMSS1-202ENST00000463526 FYB1O15117 783 aa21.45■■□□□ 1.02
CMSS1-202ENST00000463526 TMF1P82094 1093 aa21.45■■□□□ 1.02
CMSS1-202ENST00000463526 SLC27A3Q5K4L6 730 aa21.45■■□□□ 1.02
CMSS1-202ENST00000463526 AKT1S1Q96B36 256 aa21.45■■□□□ 1.02
CMSS1-202ENST00000463526 ANKRD36BQ8N2N9 1353 aa21.45■■□□□ 1.02
CMSS1-202ENST00000463526 NBPF6Q5VWK0 638 aa21.44■■□□□ 1.02
CMSS1-202ENST00000463526 NBPF4Q96M43 638 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms