RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
SSR3-202ENST00000463503 PROM2Q8N271 834 aa16.33■□□□□ 0.2
SSR3-202ENST00000463503 BTAF1O14981 1849 aa16.33■□□□□ 0.2
SSR3-202ENST00000463503 TRPM1Q7Z4N2 1603 aa16.32■□□□□ 0.2
SSR3-202ENST00000463503 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
SSR3-202ENST00000463503 C1QTNF8P60827 252 aa16.31■□□□□ 0.2
SSR3-202ENST00000463503 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
SSR3-202ENST00000463503 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
SSR3-202ENST00000463503 FHDC1Q9C0D6 1143 aaPredicted RBP16.3■□□□□ 0.2
SSR3-202ENST00000463503 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
SSR3-202ENST00000463503 ABTB2Q8N961 1025 aa16.29■□□□□ 0.2
SSR3-202ENST00000463503 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
SSR3-202ENST00000463503 MAP3K5Q99683 1374 aa16.28■□□□□ 0.2
SSR3-202ENST00000463503 PLEKHG3A1L390 1219 aa16.28■□□□□ 0.2
SSR3-202ENST00000463503 GCP02774 474 aa16.28■□□□□ 0.2
SSR3-202ENST00000463503 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
SSR3-202ENST00000463503 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
SSR3-202ENST00000463503 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
SSR3-202ENST00000463503 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
SSR3-202ENST00000463503 ABCC6O95255 1503 aa16.26■□□□□ 0.19
SSR3-202ENST00000463503 DDB1Q16531 1140 aa16.26■□□□□ 0.19
SSR3-202ENST00000463503 MARCH10Q8NA82 808 aaPredicted RBP16.26■□□□□ 0.19
SSR3-202ENST00000463503 CCDC61Q9Y6R9 512 aa16.26■□□□□ 0.19
SSR3-202ENST00000463503 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
SSR3-202ENST00000463503 USP6P35125 1406 aa16.25■□□□□ 0.19
SSR3-202ENST00000463503 CPSF1Q10570 1443 aaKnown RBP16.25■□□□□ 0.19
SSR3-202ENST00000463503 LTN1O94822 1766 aa16.24■□□□□ 0.19
SSR3-202ENST00000463503 SLC15A2Q16348 729 aa16.24■□□□□ 0.19
SSR3-202ENST00000463503 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
SSR3-202ENST00000463503 MTFR1LQ9H019 292 aa16.24■□□□□ 0.19
SSR3-202ENST00000463503 TNS2Q63HR2 1409 aa16.24■□□□□ 0.19
SSR3-202ENST00000463503 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
SSR3-202ENST00000463503 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
SSR3-202ENST00000463503 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
SSR3-202ENST00000463503 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
SSR3-202ENST00000463503 NFAT5O94916 1531 aa16.23■□□□□ 0.19
SSR3-202ENST00000463503 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
SSR3-202ENST00000463503 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
SSR3-202ENST00000463503 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
SSR3-202ENST00000463503 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
SSR3-202ENST00000463503 MON2Q7Z3U7 1717 aa16.21■□□□□ 0.19
SSR3-202ENST00000463503 LY75O60449 1722 aa16.2■□□□□ 0.18
SSR3-202ENST00000463503 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
SSR3-202ENST00000463503 AXIN2Q9Y2T1 843 aa16.2■□□□□ 0.18
SSR3-202ENST00000463503 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
SSR3-202ENST00000463503 ARXQ96QS3 562 aa16.17■□□□□ 0.18
SSR3-202ENST00000463503 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
SSR3-202ENST00000463503 ZBTB7CA1YPR0 619 aa16.16■□□□□ 0.18
SSR3-202ENST00000463503 DOT1LQ8TEK3 1739 aa16.16■□□□□ 0.18
SSR3-202ENST00000463503 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
SSR3-202ENST00000463503 NLRP6P59044 892 aa16.14■□□□□ 0.17
SSR3-202ENST00000463503 ZNF827Q17R98 1081 aa16.14■□□□□ 0.17
SSR3-202ENST00000463503 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
SSR3-202ENST00000463503 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
SSR3-202ENST00000463503 FAM208AQ9UK61 1670 aaKnown RBP16.12■□□□□ 0.17
SSR3-202ENST00000463503 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
SSR3-202ENST00000463503 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
SSR3-202ENST00000463503 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
SSR3-202ENST00000463503 GPR162Q16538 588 aa16.09■□□□□ 0.17
SSR3-202ENST00000463503 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
SSR3-202ENST00000463503 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
SSR3-202ENST00000463503 NBPF1Q3BBV0 1214 aa16.08■□□□□ 0.16
SSR3-202ENST00000463503 CABP1Q9NZU7 370 aa16.08■□□□□ 0.16
SSR3-202ENST00000463503 RGPD2P0DJD1 1756 aa16.08■□□□□ 0.16
SSR3-202ENST00000463503 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
SSR3-202ENST00000463503 EXOC5O00471 708 aa16.07■□□□□ 0.16
SSR3-202ENST00000463503 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
SSR3-202ENST00000463503 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
SSR3-202ENST00000463503 C5P01031 1676 aa16.07■□□□□ 0.16
SSR3-202ENST00000463503 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
SSR3-202ENST00000463503 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
SSR3-202ENST00000463503 PNPLA7Q6ZV29 1317 aa16.05■□□□□ 0.16
SSR3-202ENST00000463503 CSB-PGBD3P0DP91 1061 aa16.05■□□□□ 0.16
SSR3-202ENST00000463503 ERBB3P21860 1342 aa16.04■□□□□ 0.16
SSR3-202ENST00000463503 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
SSR3-202ENST00000463503 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
SSR3-202ENST00000463503 ADCY9O60503 1353 aa16.03■□□□□ 0.16
SSR3-202ENST00000463503 CLSPNQ9HAW4 1339 aa16.03■□□□□ 0.16
SSR3-202ENST00000463503 SOX12O15370 315 aa16.03■□□□□ 0.16
SSR3-202ENST00000463503 YBX3P16989 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
SSR3-202ENST00000463503 SLC16A10Q8TF71 515 aa16.03■□□□□ 0.16
SSR3-202ENST00000463503 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.16
SSR3-202ENST00000463503 KLHL34Q8N239 644 aa16.02■□□□□ 0.16
SSR3-202ENST00000463503 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
SSR3-202ENST00000463503 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
SSR3-202ENST00000463503 POLD1P28340 1107 aa16■□□□□ 0.15
SSR3-202ENST00000463503 NSD2O96028 1365 aa16■□□□□ 0.15
SSR3-202ENST00000463503 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
SSR3-202ENST00000463503 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
SSR3-202ENST00000463503 IL2RBP14784 551 aa15.98■□□□□ 0.15
SSR3-202ENST00000463503 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
SSR3-202ENST00000463503 PCNTO95613 3336 aa15.97■□□□□ 0.15
SSR3-202ENST00000463503 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
SSR3-202ENST00000463503 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
SSR3-202ENST00000463503 KTN1Q86UP2 1357 aaKnown RBP15.96■□□□□ 0.15
SSR3-202ENST00000463503 EVC2Q86UK5 1308 aa15.95■□□□□ 0.14
SSR3-202ENST00000463503 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
SSR3-202ENST00000463503 GRIN3BO60391 1043 aa15.95■□□□□ 0.14
SSR3-202ENST00000463503 HSPA6P17066 643 aa15.95■□□□□ 0.14
SSR3-202ENST00000463503 KCNQ4P56696 695 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms