RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, human

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM56-204	ENST00000463375	PODN	Q7Z5L7	613 aa		4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	SH3RF1	Q7Z6J0	888 aa		4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	CCDC116	Q8IYX3	515 aa		4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	BEND7	Q8N7W2	519 aa	Predicted RBP	4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	SPIRE2	Q8WWL2	714 aa		4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	KRTAP4-12	Q9BQ66	201 aa		4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	MAP10	Q9P2G4	905 aa		4.22	□□□□□ -1.73
TMEM56-204	ENST00000463375	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.21	□□□□□ -1.73
TMEM56-204	ENST00000463375	GJA5	P36382	358 aa		4.21	□□□□□ -1.74
TMEM56-204	ENST00000463375	CCDC102A	Q96A19	550 aa		4.21	□□□□□ -1.74
TMEM56-204	ENST00000463375	LRRC4B	Q9NT99	713 aa		4.21	□□□□□ -1.74
TMEM56-204	ENST00000463375	MOXD2P	A6NHM9	499 aa		4.2	□□□□□ -1.74
TMEM56-204	ENST00000463375	NDUFV2	P19404	249 aa		4.2	□□□□□ -1.74
TMEM56-204	ENST00000463375	AGER	Q15109	404 aa		4.2	□□□□□ -1.74
TMEM56-204	ENST00000463375	VASH1	Q7L8A9	365 aa	Predicted RBP	4.2	□□□□□ -1.74
TMEM56-204	ENST00000463375	CFAP99	D6REC4	459 aa		4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	CTSO	P43234	321 aa	Predicted RBP	4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	CBLB	Q13191	982 aa		4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	SH3BP5L	Q7L8J4	393 aa		4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	ALYREF	Q86V81	257 aa	Known RBP	4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	RNF217	Q8TC41	542 aa		4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	MBIP	Q9NS73	344 aa		4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	PGPEP1	Q9NXJ5	209 aa		4.19	□□□□□ -1.74
TMEM56-204	ENST00000463375	BCR	P11274	1271 aa		4.18	□□□□□ -1.74
TMEM56-204	ENST00000463375	IGF1R	P08069	1367 aa		4.17	□□□□□ -1.74
TMEM56-204	ENST00000463375	KRBA1	A5PL33	1030 aa		4.17	□□□□□ -1.74
TMEM56-204	ENST00000463375	NBPF14	Q5TI25	921 aa		4.17	□□□□□ -1.74
TMEM56-204	ENST00000463375	ARMC2	Q8NEN0	867 aa		4.17	□□□□□ -1.74
TMEM56-204	ENST00000463375	GMCL1	Q96IK5	515 aa		4.17	□□□□□ -1.74
TMEM56-204	ENST00000463375	CUEDC1	Q9NWM3	386 aa	Predicted RBP	4.17	□□□□□ -1.74
TMEM56-204	ENST00000463375	FURIN	P09958	794 aa		4.16	□□□□□ -1.74
TMEM56-204	ENST00000463375	NEDD1	Q8NHV4	660 aa		4.16	□□□□□ -1.74
TMEM56-204	ENST00000463375	ACD	Q96AP0	544 aa		4.16	□□□□□ -1.74
TMEM56-204	ENST00000463375	ZNF837	Q96EG3	531 aa	Predicted RBP	4.16	□□□□□ -1.74
TMEM56-204	ENST00000463375	INSM2	Q96T92	566 aa	Predicted RBP	4.16	□□□□□ -1.74
TMEM56-204	ENST00000463375	SSTR3	P32745	418 aa	Predicted RBP	4.15	□□□□□ -1.75
TMEM56-204	ENST00000463375	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.15	□□□□□ -1.75
TMEM56-204	ENST00000463375	KRTAP9-9	Q9BYP9	154 aa		4.15	□□□□□ -1.75
TMEM56-204	ENST00000463375	KRTAP9-4	Q9BYQ2	154 aa		4.15	□□□□□ -1.75
TMEM56-204	ENST00000463375	POLM	Q9NP87	494 aa	Predicted RBP	4.15	□□□□□ -1.75
TMEM56-204	ENST00000463375	PER1	O15534	1290 aa	Predicted RBP	4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	ITGB7	P26010	798 aa		4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	DHX9	Q08211	1270 aa	Known RBP	4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	ERFE	Q4G0M1	354 aa		4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	PRPF38B	Q5VTL8	546 aa	Known RBP	4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	TRIM22	Q8IYM9	498 aa		4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	AGBL1	Q96MI9	1066 aa		4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	ZBTB3	Q9H5J0	574 aa		4.14	□□□□□ -1.75
TMEM56-204	ENST00000463375	KRTAP4-8	A0A0G2JLE6	195 aa		4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	MAGEB6P1	A0A0J9YX57	407 aa		4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	OIP5	O43482	229 aa		4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	HRC	P23327	699 aa		4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	COL8A1	P27658	744 aa		4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	RELB	Q01201	579 aa		4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	KRI1	Q8N9T8	703 aa	Known RBP	4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	CDV3	Q9UKY7	258 aa	Known RBP	4.13	□□□□□ -1.75
TMEM56-204	ENST00000463375	BTBD11	A6QL63	1104 aa		4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	SNRPN	P63162	240 aa	Known RBP	4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	DIXDC1	Q155Q3	683 aa		4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	FOXR1	Q6PIV2	292 aa		4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	KCTD15	Q96SI1	283 aa	Predicted RBP	4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	MKL2	Q9ULH7	1088 aa		4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	PCDHB15	Q9Y5E8	787 aa		4.12	□□□□□ -1.75
TMEM56-204	ENST00000463375	GPR25	O00155	361 aa		4.11	□□□□□ -1.75
TMEM56-204	ENST00000463375	INTS6L	Q5JSJ4	861 aa	Known RBP	4.11	□□□□□ -1.75
TMEM56-204	ENST00000463375	LYSMD3	Q7Z3D4	306 aa		4.11	□□□□□ -1.75
TMEM56-204	ENST00000463375	CARD14	Q9BXL6	1004 aa		4.11	□□□□□ -1.75
TMEM56-204	ENST00000463375	TBC1D2	Q9BYX2	928 aa		4.11	□□□□□ -1.75
TMEM56-204	ENST00000463375	ADH1A	P07327	375 aa		4.1	□□□□□ -1.75
TMEM56-204	ENST00000463375	AMER1	Q5JTC6	1135 aa	Predicted RBP	4.1	□□□□□ -1.75
TMEM56-204	ENST00000463375	KRTAP19-1	Q8IUB9	90 aa		4.1	□□□□□ -1.75
TMEM56-204	ENST00000463375	SLC10A4	Q96EP9	437 aa		4.1	□□□□□ -1.75
TMEM56-204	ENST00000463375	ZNF395	Q9H8N7	513 aa	Predicted RBP	4.1	□□□□□ -1.75
TMEM56-204	ENST00000463375	DBN1	Q16643	649 aa		4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	AMHR2	Q16671	573 aa		4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	KDF1	Q8NAX2	398 aa	Predicted RBP	4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	TRERF1	Q96PN7	1200 aa		4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	BEGAIN	Q9BUH8	593 aa		4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	OXCT2	Q9BYC2	517 aa	Predicted RBP	4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	NSFL1C	Q9UNZ2	370 aa	Known RBP	4.09	□□□□□ -1.75
TMEM56-204	ENST00000463375	SHISA8	B8ZZ34	492 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375		H7C1W4	665 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	MX2	P20592	715 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	PTGIR	P43119	386 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	MAP2K3	P46734	347 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	RNF144A	P50876	292 aa	Predicted RBP	4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	ZMYM1	Q5SVZ6	1142 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	PDXDC2P	Q6P474	469 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	CABLES1	Q8TDN4	633 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	GTPBP3	Q969Y2	492 aa	Known RBP	4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	DYRK1B	Q9Y463	629 aa		4.08	□□□□□ -1.76
TMEM56-204	ENST00000463375	C1QTNF9B	B2RNN3	333 aa		4.07	□□□□□ -1.76
TMEM56-204	ENST00000463375	LILRA1	O75019	489 aa		4.07	□□□□□ -1.76
TMEM56-204	ENST00000463375	HOXB4	P17483	251 aa	Predicted RBP	4.07	□□□□□ -1.76
TMEM56-204	ENST00000463375	TTLL12	Q14166	644 aa	Predicted RBP	4.07	□□□□□ -1.76
TMEM56-204	ENST00000463375	TUSC1	Q2TAM9	212 aa		4.07	□□□□□ -1.76

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