RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PRAM1Q96QH2 718 aa20.37■□□□□ 0.85
C9orf3-211ENST00000463372 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
C9orf3-211ENST00000463372 PAPPAQ13219 1627 aa20.36■□□□□ 0.85
C9orf3-211ENST00000463372 NUTM2GQ5VZR2 741 aa20.36■□□□□ 0.85
C9orf3-211ENST00000463372 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
C9orf3-211ENST00000463372 JMYQ8N9B5 988 aa20.35■□□□□ 0.85
C9orf3-211ENST00000463372 MARCH10Q8NA82 808 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-211ENST00000463372 KLRG1Q96E93 195 aa20.35■□□□□ 0.85
C9orf3-211ENST00000463372 POGKQ9P215 609 aa20.35■□□□□ 0.85
C9orf3-211ENST00000463372 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
C9orf3-211ENST00000463372 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
C9orf3-211ENST00000463372 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
C9orf3-211ENST00000463372 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.85
C9orf3-211ENST00000463372 COL5A2P05997 1499 aaPredicted RBP20.33■□□□□ 0.85
C9orf3-211ENST00000463372 CPDO75976 1380 aa20.33■□□□□ 0.84
C9orf3-211ENST00000463372 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
C9orf3-211ENST00000463372 TOMM70O94826 608 aa20.31■□□□□ 0.84
C9orf3-211ENST00000463372 ITGAEP38570 1179 aa20.31■□□□□ 0.84
C9orf3-211ENST00000463372 ZNF827Q17R98 1081 aa20.31■□□□□ 0.84
C9orf3-211ENST00000463372 PRR36Q9H6K5 1346 aa20.3■□□□□ 0.84
C9orf3-211ENST00000463372 RGL3Q3MIN7 710 aa20.3■□□□□ 0.84
C9orf3-211ENST00000463372 TULP4Q9NRJ4 1543 aa20.3■□□□□ 0.84
C9orf3-211ENST00000463372 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-211ENST00000463372 ITSN1Q15811 1721 aa20.29■□□□□ 0.84
C9orf3-211ENST00000463372 ARHGEF28Q8N1W1 1705 aaKnown RBP20.29■□□□□ 0.84
C9orf3-211ENST00000463372 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-211ENST00000463372 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
C9orf3-211ENST00000463372 TOM1L2Q6ZVM7 507 aa20.26■□□□□ 0.83
C9orf3-211ENST00000463372 HTRA3P83110 453 aa20.23■□□□□ 0.83
C9orf3-211ENST00000463372 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
C9orf3-211ENST00000463372 BTAF1O14981 1849 aa20.23■□□□□ 0.83
C9orf3-211ENST00000463372 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
C9orf3-211ENST00000463372 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
C9orf3-211ENST00000463372 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
C9orf3-211ENST00000463372 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
C9orf3-211ENST00000463372 MINK1Q8N4C8 1332 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-211ENST00000463372 WASLO00401 505 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-211ENST00000463372 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
C9orf3-211ENST00000463372 EXOC5O00471 708 aa20.2■□□□□ 0.82
C9orf3-211ENST00000463372 TFCP2L1Q9NZI6 479 aa20.2■□□□□ 0.82
C9orf3-211ENST00000463372 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
C9orf3-211ENST00000463372 GCP02774 474 aa20.19■□□□□ 0.82
C9orf3-211ENST00000463372 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
C9orf3-211ENST00000463372 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
C9orf3-211ENST00000463372 USP19O94966 1318 aa20.18■□□□□ 0.82
C9orf3-211ENST00000463372 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
C9orf3-211ENST00000463372 NLRP13Q86W25 1043 aa20.16■□□□□ 0.82
C9orf3-211ENST00000463372 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
C9orf3-211ENST00000463372 CD2APQ9Y5K6 639 aa20.16■□□□□ 0.82
C9orf3-211ENST00000463372 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
C9orf3-211ENST00000463372 HSPA1AP0DMV8 641 aaKnown RBP20.14■□□□□ 0.81
C9orf3-211ENST00000463372 HSPA1BP0DMV9 641 aaKnown RBP20.14■□□□□ 0.81
C9orf3-211ENST00000463372 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
C9orf3-211ENST00000463372 USP6P35125 1406 aa20.13■□□□□ 0.81
C9orf3-211ENST00000463372 WDR17Q8IZU2 1322 aa20.13■□□□□ 0.81
C9orf3-211ENST00000463372 MSH5O43196 834 aa20.13■□□□□ 0.81
C9orf3-211ENST00000463372 C16orf71Q8IYS4 520 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-211ENST00000463372 SLC27A3Q5K4L6 730 aa20.12■□□□□ 0.81
C9orf3-211ENST00000463372 NUDT16Q96DE0 195 aaKnown RBP20.12■□□□□ 0.81
C9orf3-211ENST00000463372 FSTL1Q12841 308 aa20.1■□□□□ 0.81
C9orf3-211ENST00000463372 TRAK1Q9UPV9 953 aa20.1■□□□□ 0.81
C9orf3-211ENST00000463372 TNS2Q63HR2 1409 aa20.1■□□□□ 0.81
C9orf3-211ENST00000463372 ACEP12821 1306 aa20.09■□□□□ 0.81
C9orf3-211ENST00000463372 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
C9orf3-211ENST00000463372 TRPM1Q7Z4N2 1603 aa20.09■□□□□ 0.81
C9orf3-211ENST00000463372 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-211ENST00000463372 RGPD5Q99666 1765 aa20.08■□□□□ 0.81
C9orf3-211ENST00000463372 NMRK2Q9NPI5 230 aa20.08■□□□□ 0.81
C9orf3-211ENST00000463372 COL18A1P39060 1754 aa20.08■□□□□ 0.8
C9orf3-211ENST00000463372 CSB-PGBD3P0DP91 1061 aa20.07■□□□□ 0.8
C9orf3-211ENST00000463372 CARD10Q9BWT7 1032 aa20.07■□□□□ 0.8
C9orf3-211ENST00000463372 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
C9orf3-211ENST00000463372 PIK3C2AO00443 1686 aa20.06■□□□□ 0.8
C9orf3-211ENST00000463372 FAM161AQ3B820 660 aa20.05■□□□□ 0.8
C9orf3-211ENST00000463372 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
C9orf3-211ENST00000463372 ABCC6O95255 1503 aa20.03■□□□□ 0.8
C9orf3-211ENST00000463372 AXIN2Q9Y2T1 843 aa20.03■□□□□ 0.8
C9orf3-211ENST00000463372 CCDC7Q96M83 1385 aa20.01■□□□□ 0.79
C9orf3-211ENST00000463372 COL23A1Q86Y22 540 aaPredicted RBP20.01■□□□□ 0.79
C9orf3-211ENST00000463372 CICQ96RK0 1608 aaPredicted RBP20.01■□□□□ 0.79
C9orf3-211ENST00000463372 KCNQ4P56696 695 aa20■□□□□ 0.79
C9orf3-211ENST00000463372 CCDC61Q9Y6R9 512 aa19.99■□□□□ 0.79
C9orf3-211ENST00000463372 PPIP5K1Q6PFW1 1433 aa19.99■□□□□ 0.79
C9orf3-211ENST00000463372 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
C9orf3-211ENST00000463372 NLRP6P59044 892 aa19.98■□□□□ 0.79
C9orf3-211ENST00000463372 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
C9orf3-211ENST00000463372 SLIT3O75094 1523 aa19.97■□□□□ 0.79
C9orf3-211ENST00000463372 LY75O60449 1722 aa19.96■□□□□ 0.79
C9orf3-211ENST00000463372 CDK19Q9BWU1 502 aa19.96■□□□□ 0.79
C9orf3-211ENST00000463372 CPSF1Q10570 1443 aaKnown RBP19.94■□□□□ 0.78
C9orf3-211ENST00000463372 SMC1BQ8NDV3 1235 aa19.93■□□□□ 0.78
C9orf3-211ENST00000463372 MLLT1Q03111 559 aaPredicted RBP19.9■□□□□ 0.78
C9orf3-211ENST00000463372 CCNL1Q9UK58 526 aaPredicted RBP19.9■□□□□ 0.78
C9orf3-211ENST00000463372 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
C9orf3-211ENST00000463372 IL2RBP14784 551 aa19.89■□□□□ 0.77
C9orf3-211ENST00000463372 FLAD1Q8NFF5 587 aa19.89■□□□□ 0.77
C9orf3-211ENST00000463372 SYTL4Q96C24 671 aaPredicted RBP19.89■□□□□ 0.77
C9orf3-211ENST00000463372 KIAA1210Q9ULL0 1709 aa19.88■□□□□ 0.77
C9orf3-211ENST00000463372 TNRC6CQ9HCJ0 1690 aaKnown RBP19.88■□□□□ 0.77
C9orf3-211ENST00000463372 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms