RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
TMEM254-207ENST00000463029 TOPAZ1Q8N9V7 1692 aa11.85□□□□□ -0.51
TMEM254-207ENST00000463029 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
TMEM254-207ENST00000463029 CABP2Q9NPB3 220 aa11.85□□□□□ -0.51
TMEM254-207ENST00000463029 PHRF1Q9P1Y6 1649 aaKnown RBP11.85□□□□□ -0.51
TMEM254-207ENST00000463029 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
TMEM254-207ENST00000463029 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
TMEM254-207ENST00000463029 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
TMEM254-207ENST00000463029 LARP1Q6PKG0 1096 aaKnown RBP11.83□□□□□ -0.52
TMEM254-207ENST00000463029 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
TMEM254-207ENST00000463029 TRIM37O94972 964 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 GCP02774 474 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 USP19O94966 1318 aa11.82□□□□□ -0.52
TMEM254-207ENST00000463029 CPDO75976 1380 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 RGPD1P0DJD0 1748 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 DISP2A7MBM2 1401 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 BARGINQ6ZT62 677 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 CABP1Q9NZU7 370 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 CAMTA1Q9Y6Y1 1673 aa11.81□□□□□ -0.52
TMEM254-207ENST00000463029 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
TMEM254-207ENST00000463029 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
TMEM254-207ENST00000463029 APBA3O96018 575 aa11.79□□□□□ -0.52
TMEM254-207ENST00000463029 NLRP6P59044 892 aa11.79□□□□□ -0.52
TMEM254-207ENST00000463029 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
TMEM254-207ENST00000463029 EVC2Q86UK5 1308 aa11.79□□□□□ -0.52
TMEM254-207ENST00000463029 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
TMEM254-207ENST00000463029 USP6P35125 1406 aa11.78□□□□□ -0.52
TMEM254-207ENST00000463029 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
TMEM254-207ENST00000463029 NEUROD1Q13562 356 aa11.78□□□□□ -0.52
TMEM254-207ENST00000463029 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
TMEM254-207ENST00000463029 LRP5O75197 1615 aa11.78□□□□□ -0.52
TMEM254-207ENST00000463029 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
TMEM254-207ENST00000463029 TNS1Q9HBL0 1735 aaKnown RBP11.77□□□□□ -0.52
TMEM254-207ENST00000463029 COL5A2P05997 1499 aaPredicted RBP11.77□□□□□ -0.52
TMEM254-207ENST00000463029 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
TMEM254-207ENST00000463029 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
TMEM254-207ENST00000463029 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
TMEM254-207ENST00000463029 PARD3Q8TEW0 1356 aa11.76□□□□□ -0.53
TMEM254-207ENST00000463029 TOM1L2Q6ZVM7 507 aa11.75□□□□□ -0.53
TMEM254-207ENST00000463029 AATKQ6ZMQ8 1374 aa11.75□□□□□ -0.53
TMEM254-207ENST00000463029 CRB1P82279 1406 aa11.75□□□□□ -0.53
TMEM254-207ENST00000463029 SOX12O15370 315 aa11.74□□□□□ -0.53
TMEM254-207ENST00000463029 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
TMEM254-207ENST00000463029 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
TMEM254-207ENST00000463029 SLIT3O75094 1523 aa11.74□□□□□ -0.53
TMEM254-207ENST00000463029 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
TMEM254-207ENST00000463029 NUBP1P53384 320 aa11.73□□□□□ -0.53
TMEM254-207ENST00000463029 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
TMEM254-207ENST00000463029 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
TMEM254-207ENST00000463029 GABBR2O75899 941 aa11.72□□□□□ -0.53
TMEM254-207ENST00000463029 DDB1Q16531 1140 aa11.72□□□□□ -0.53
TMEM254-207ENST00000463029 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
TMEM254-207ENST00000463029 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
TMEM254-207ENST00000463029 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
TMEM254-207ENST00000463029 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
TMEM254-207ENST00000463029 CPSF1Q10570 1443 aaKnown RBP11.71□□□□□ -0.53
TMEM254-207ENST00000463029 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
TMEM254-207ENST00000463029 WDR17Q8IZU2 1322 aa11.71□□□□□ -0.53
TMEM254-207ENST00000463029 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
TMEM254-207ENST00000463029 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
TMEM254-207ENST00000463029 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
TMEM254-207ENST00000463029 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
TMEM254-207ENST00000463029 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
TMEM254-207ENST00000463029 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
TMEM254-207ENST00000463029 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
TMEM254-207ENST00000463029 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
TMEM254-207ENST00000463029 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
TMEM254-207ENST00000463029 CARD11Q9BXL7 1154 aa11.69□□□□□ -0.54
TMEM254-207ENST00000463029 LRRC37A3O60309 1634 aa11.68□□□□□ -0.54
TMEM254-207ENST00000463029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
TMEM254-207ENST00000463029 CDCA7Q9BWT1 371 aaPredicted RBP11.68□□□□□ -0.54
TMEM254-207ENST00000463029 RREB1Q92766 1687 aa11.68□□□□□ -0.54
TMEM254-207ENST00000463029 COL18A1P39060 1754 aa11.67□□□□□ -0.54
TMEM254-207ENST00000463029 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
TMEM254-207ENST00000463029 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
TMEM254-207ENST00000463029 CARD10Q9BWT7 1032 aa11.67□□□□□ -0.54
TMEM254-207ENST00000463029 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
TMEM254-207ENST00000463029 PTF1AQ7RTS3 328 aa11.66□□□□□ -0.54
TMEM254-207ENST00000463029 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-207ENST00000463029 AKAP12Q02952 1782 aa11.66□□□□□ -0.54
TMEM254-207ENST00000463029 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
TMEM254-207ENST00000463029 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
TMEM254-207ENST00000463029 NFAT5O94916 1531 aa11.65□□□□□ -0.54
TMEM254-207ENST00000463029 PLSCR1O15162 318 aa11.65□□□□□ -0.54
TMEM254-207ENST00000463029 NME9Q86XW9 330 aa11.65□□□□□ -0.54
TMEM254-207ENST00000463029 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
TMEM254-207ENST00000463029 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
TMEM254-207ENST00000463029 TONSLQ96HA7 1378 aa11.65□□□□□ -0.55
TMEM254-207ENST00000463029 EXOC5O00471 708 aa11.64□□□□□ -0.55
TMEM254-207ENST00000463029 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-207ENST00000463029 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
TMEM254-207ENST00000463029 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-207ENST00000463029 CCDC7Q96M83 1385 aa11.64□□□□□ -0.55
TMEM254-207ENST00000463029 KCNQ2O43526 872 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms