RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 SPATA31A7Q8IWB4 1347 aa11.79□□□□□ -0.52
GARNL3-212ENST00000463005 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
GARNL3-212ENST00000463005 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
GARNL3-212ENST00000463005 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-212ENST00000463005 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
GARNL3-212ENST00000463005 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
GARNL3-212ENST00000463005 ALS2Q96Q42 1657 aa11.78□□□□□ -0.52
GARNL3-212ENST00000463005 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.52
GARNL3-212ENST00000463005 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
GARNL3-212ENST00000463005 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
GARNL3-212ENST00000463005 SAFB2Q14151 953 aaKnown RBP eCLIP11.77□□□□□ -0.53
GARNL3-212ENST00000463005 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.53
GARNL3-212ENST00000463005 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
GARNL3-212ENST00000463005 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.53
GARNL3-212ENST00000463005 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
GARNL3-212ENST00000463005 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
GARNL3-212ENST00000463005 CAMKK2Q96RR4 588 aa11.75□□□□□ -0.53
GARNL3-212ENST00000463005 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
GARNL3-212ENST00000463005 THSD7AQ9UPZ6 1657 aa11.75□□□□□ -0.53
GARNL3-212ENST00000463005 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
GARNL3-212ENST00000463005 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
GARNL3-212ENST00000463005 NGDNQ8NEJ9 315 aaKnown RBP11.74□□□□□ -0.53
GARNL3-212ENST00000463005 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
GARNL3-212ENST00000463005 WASLO00401 505 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-212ENST00000463005 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
GARNL3-212ENST00000463005 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
GARNL3-212ENST00000463005 TRIM37O94972 964 aa11.72□□□□□ -0.53
GARNL3-212ENST00000463005 APBA3O96018 575 aa11.72□□□□□ -0.53
GARNL3-212ENST00000463005 NBPF8Q3BBV2 869 aa11.72□□□□□ -0.53
GARNL3-212ENST00000463005 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
GARNL3-212ENST00000463005 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
GARNL3-212ENST00000463005 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
GARNL3-212ENST00000463005 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.53
GARNL3-212ENST00000463005 PRR36Q9H6K5 1346 aa11.71□□□□□ -0.53
GARNL3-212ENST00000463005 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-212ENST00000463005 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
GARNL3-212ENST00000463005 MINK1Q8N4C8 1332 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-212ENST00000463005 ITSN1Q15811 1721 aa11.7□□□□□ -0.54
GARNL3-212ENST00000463005 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-212ENST00000463005 EVA1CP58658 441 aa11.7□□□□□ -0.54
GARNL3-212ENST00000463005 PDE3BQ13370 1112 aa11.7□□□□□ -0.54
GARNL3-212ENST00000463005 BARGINQ6ZT62 677 aa11.7□□□□□ -0.54
GARNL3-212ENST00000463005 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
GARNL3-212ENST00000463005 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
GARNL3-212ENST00000463005 YY1P25490 414 aa11.69□□□□□ -0.54
GARNL3-212ENST00000463005 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
GARNL3-212ENST00000463005 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
GARNL3-212ENST00000463005 ADGRB1O14514 1584 aa11.69□□□□□ -0.54
GARNL3-212ENST00000463005 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
GARNL3-212ENST00000463005 RREB1Q92766 1687 aa11.68□□□□□ -0.54
GARNL3-212ENST00000463005 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
GARNL3-212ENST00000463005 NUDT16Q96DE0 195 aaKnown RBP11.67□□□□□ -0.54
GARNL3-212ENST00000463005 THRAP3Q9Y2W1 955 aaKnown RBP11.67□□□□□ -0.54
GARNL3-212ENST00000463005 ATP7BP35670 1465 aa11.66□□□□□ -0.54
GARNL3-212ENST00000463005 PPP1R37O75864 691 aa11.66□□□□□ -0.54
GARNL3-212ENST00000463005 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
GARNL3-212ENST00000463005 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
GARNL3-212ENST00000463005 PHRF1Q9P1Y6 1649 aaKnown RBP11.66□□□□□ -0.54
GARNL3-212ENST00000463005 KCNQ2O43526 872 aa11.65□□□□□ -0.54
GARNL3-212ENST00000463005 TCP11L2Q8N4U5 519 aa11.65□□□□□ -0.54
GARNL3-212ENST00000463005 USP35Q9P2H5 1018 aa11.65□□□□□ -0.54
GARNL3-212ENST00000463005 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
GARNL3-212ENST00000463005 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
GARNL3-212ENST00000463005 SSH2Q76I76 1423 aa11.64□□□□□ -0.55
GARNL3-212ENST00000463005 DCAF11Q8TEB1 546 aa11.64□□□□□ -0.55
GARNL3-212ENST00000463005 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
GARNL3-212ENST00000463005 ABTB2Q8N961 1025 aa11.63□□□□□ -0.55
GARNL3-212ENST00000463005 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
GARNL3-212ENST00000463005 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
GARNL3-212ENST00000463005 POLR3AO14802 1390 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-212ENST00000463005 CPDO75976 1380 aa11.63□□□□□ -0.55
GARNL3-212ENST00000463005 ACEP12821 1306 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 PLSCR1O15162 318 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 NUTM2GQ5VZR2 741 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
GARNL3-212ENST00000463005 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
GARNL3-212ENST00000463005 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
GARNL3-212ENST00000463005 NINLQ9Y2I6 1382 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 CAMTA1Q9Y6Y1 1673 aa11.62□□□□□ -0.55
GARNL3-212ENST00000463005 PARP4Q9UKK3 1724 aaKnown RBP11.61□□□□□ -0.55
GARNL3-212ENST00000463005 SBF2Q86WG5 1849 aa11.6□□□□□ -0.55
GARNL3-212ENST00000463005 RGPD3A6NKT7 1758 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-212ENST00000463005 RGPD4Q7Z3J3 1758 aa11.6□□□□□ -0.55
GARNL3-212ENST00000463005 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
GARNL3-212ENST00000463005 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
GARNL3-212ENST00000463005 LMO7Q8WWI1 1683 aa11.59□□□□□ -0.55
GARNL3-212ENST00000463005 GCP02774 474 aa11.59□□□□□ -0.55
GARNL3-212ENST00000463005 USP19O94966 1318 aa11.59□□□□□ -0.55
GARNL3-212ENST00000463005 BRD4O60885 1362 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-212ENST00000463005 TOPAZ1Q8N9V7 1692 aa11.58□□□□□ -0.56
GARNL3-212ENST00000463005 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.56
GARNL3-212ENST00000463005 NBR1Q14596 966 aa11.57□□□□□ -0.56
GARNL3-212ENST00000463005 DDB1Q16531 1140 aa11.57□□□□□ -0.56
GARNL3-212ENST00000463005 TMEM106CQ9BVX2 250 aa11.57□□□□□ -0.56
GARNL3-212ENST00000463005 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
GARNL3-212ENST00000463005 OVOS2A0A0J9YW53 1432 aa11.57□□□□□ -0.56
GARNL3-212ENST00000463005 CRB1P82279 1406 aa11.57□□□□□ -0.56
GARNL3-212ENST00000463005 OVOS2Q6IE36 1432 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms