RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 KIAA0232Q92628 1395 aa24.04■■□□□ 1.44
ATPAF2-202ENST00000462733 PEAK1Q9H792 1746 aa24.04■■□□□ 1.44
ATPAF2-202ENST00000462733 SMG6Q86US8 1419 aaKnown RBP24.03■■□□□ 1.44
ATPAF2-202ENST00000462733 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
ATPAF2-202ENST00000462733 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
ATPAF2-202ENST00000462733 PRDM11Q9NQV5 511 aa24.01■■□□□ 1.43
ATPAF2-202ENST00000462733 CPDO75976 1380 aa24.01■■□□□ 1.43
ATPAF2-202ENST00000462733 FLT4P35916 1363 aa24■■□□□ 1.43
ATPAF2-202ENST00000462733 HOXC9P31274 260 aa24■■□□□ 1.43
ATPAF2-202ENST00000462733 HSP90AB2PQ58FF8 381 aa24■■□□□ 1.43
ATPAF2-202ENST00000462733 CFAP53Q96M91 514 aa24■■□□□ 1.43
ATPAF2-202ENST00000462733 CDK12Q9NYV4 1490 aaPredicted RBP23.99■■□□□ 1.43
ATPAF2-202ENST00000462733 SPATA31A6Q5VVP1 1343 aa23.99■■□□□ 1.43
ATPAF2-202ENST00000462733 IP6K1Q92551 441 aa23.98■■□□□ 1.43
ATPAF2-202ENST00000462733 RTL1A6NKG5 1358 aa23.97■■□□□ 1.43
ATPAF2-202ENST00000462733 RGPD5Q99666 1765 aa23.97■■□□□ 1.43
ATPAF2-202ENST00000462733 KIF24Q5T7B8 1368 aa23.97■■□□□ 1.43
ATPAF2-202ENST00000462733 FAM83GA6ND36 823 aa23.96■■□□□ 1.43
ATPAF2-202ENST00000462733 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
ATPAF2-202ENST00000462733 COL18A1P39060 1754 aa23.96■■□□□ 1.43
ATPAF2-202ENST00000462733 LTV1Q96GA3 475 aaPredicted RBP23.96■■□□□ 1.43
ATPAF2-202ENST00000462733 FAM9BQ8IZU0 186 aa23.95■■□□□ 1.42
ATPAF2-202ENST00000462733 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
ATPAF2-202ENST00000462733 LRP6O75581 1613 aa23.94■■□□□ 1.42
ATPAF2-202ENST00000462733 INSRP06213 1382 aa23.93■■□□□ 1.42
ATPAF2-202ENST00000462733 DIAPH1O60610 1272 aaKnown RBP23.93■■□□□ 1.42
ATPAF2-202ENST00000462733 EIF4A2Q14240 407 aaKnown RBP23.92■■□□□ 1.42
ATPAF2-202ENST00000462733 COL14A1Q05707 1796 aaKnown RBP23.91■■□□□ 1.42
ATPAF2-202ENST00000462733 BLMP54132 1417 aaPredicted RBP23.91■■□□□ 1.42
ATPAF2-202ENST00000462733 MEX3CQ5U5Q3 659 aaKnown RBP23.9■■□□□ 1.42
ATPAF2-202ENST00000462733 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
ATPAF2-202ENST00000462733 ABCC6O95255 1503 aa23.9■■□□□ 1.42
ATPAF2-202ENST00000462733 IL13P35225 146 aa23.9■■□□□ 1.42
ATPAF2-202ENST00000462733 CAMTA1Q9Y6Y1 1673 aa23.89■■□□□ 1.42
ATPAF2-202ENST00000462733 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.41
ATPAF2-202ENST00000462733 ANKRD24Q8TF21 1146 aa23.89■■□□□ 1.41
ATPAF2-202ENST00000462733 C8orf37Q96NL8 207 aa23.89■■□□□ 1.41
ATPAF2-202ENST00000462733 BTG4Q9NY30 223 aa23.89■■□□□ 1.41
ATPAF2-202ENST00000462733 NUDCQ9Y266 331 aa23.88■■□□□ 1.41
ATPAF2-202ENST00000462733 WDR43Q15061 677 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATPAF2-202ENST00000462733 PNISRQ8TF01 805 aaKnown RBP23.87■■□□□ 1.41
ATPAF2-202ENST00000462733 CSB-PGBD3P0DP91 1061 aa23.87■■□□□ 1.41
ATPAF2-202ENST00000462733 STRN4Q9NRL3 753 aa23.87■■□□□ 1.41
ATPAF2-202ENST00000462733 PLCH1Q4KWH8 1693 aa23.87■■□□□ 1.41
ATPAF2-202ENST00000462733 ERBB3P21860 1342 aa23.86■■□□□ 1.41
ATPAF2-202ENST00000462733 NGLY1Q96IV0 654 aa23.86■■□□□ 1.41
ATPAF2-202ENST00000462733 EVA1CP58658 441 aa23.85■■□□□ 1.41
ATPAF2-202ENST00000462733 RGPD2P0DJD1 1756 aa23.85■■□□□ 1.41
ATPAF2-202ENST00000462733 U2AF1L5P0DN76 240 aaPredicted RBP23.84■■□□□ 1.41
ATPAF2-202ENST00000462733 U2AF1Q01081 240 aaKnown RBP eCLIP23.84■■□□□ 1.41
ATPAF2-202ENST00000462733 COL5A2P05997 1499 aaPredicted RBP23.84■■□□□ 1.41
ATPAF2-202ENST00000462733 EYA1Q99502 592 aa23.83■■□□□ 1.41
ATPAF2-202ENST00000462733 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
ATPAF2-202ENST00000462733 ADAMTS8Q9UP79 889 aa23.81■■□□□ 1.4
ATPAF2-202ENST00000462733 NBPF6Q5VWK0 638 aa23.81■■□□□ 1.4
ATPAF2-202ENST00000462733 USHBP1Q8N6Y0 703 aa23.81■■□□□ 1.4
ATPAF2-202ENST00000462733 NBPF4Q96M43 638 aa23.81■■□□□ 1.4
ATPAF2-202ENST00000462733 NLRP2Q9NX02 1062 aa23.81■■□□□ 1.4
ATPAF2-202ENST00000462733 SLIT2O94813 1529 aa23.8■■□□□ 1.4
ATPAF2-202ENST00000462733 HMOX1P09601 288 aa23.8■■□□□ 1.4
ATPAF2-202ENST00000462733 ILDR1Q86SU0 546 aaPredicted RBP23.8■■□□□ 1.4
ATPAF2-202ENST00000462733 WDR17Q8IZU2 1322 aa23.8■■□□□ 1.4
ATPAF2-202ENST00000462733 NWD2Q9ULI1 1742 aa23.8■■□□□ 1.4
ATPAF2-202ENST00000462733 LARP1Q6PKG0 1096 aaKnown RBP23.79■■□□□ 1.4
ATPAF2-202ENST00000462733 TOM1L2Q6ZVM7 507 aa23.79■■□□□ 1.4
ATPAF2-202ENST00000462733 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
ATPAF2-202ENST00000462733 NRAPQ86VF7 1730 aa23.78■■□□□ 1.4
ATPAF2-202ENST00000462733 SULT6B1Q6IMI4 303 aa23.78■■□□□ 1.4
ATPAF2-202ENST00000462733 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
ATPAF2-202ENST00000462733 FNBP4Q8N3X1 1017 aaPredicted RBP23.78■■□□□ 1.4
ATPAF2-202ENST00000462733 IGSF1Q8N6C5 1336 aa23.78■■□□□ 1.4
ATPAF2-202ENST00000462733 FAM208AQ9UK61 1670 aaKnown RBP23.77■■□□□ 1.4
ATPAF2-202ENST00000462733 AFF2P51816 1311 aa23.76■■□□□ 1.39
ATPAF2-202ENST00000462733 UNC5CLQ8IV45 518 aa23.76■■□□□ 1.39
ATPAF2-202ENST00000462733 USP21Q9UK80 565 aa23.76■■□□□ 1.39
ATPAF2-202ENST00000462733 BCL9LQ86UU0 1499 aa23.74■■□□□ 1.39
ATPAF2-202ENST00000462733 CCDC146Q8IYE0 955 aa23.74■■□□□ 1.39
ATPAF2-202ENST00000462733 USP35Q9P2H5 1018 aa23.74■■□□□ 1.39
ATPAF2-202ENST00000462733 CRB1P82279 1406 aa23.73■■□□□ 1.39
ATPAF2-202ENST00000462733 RSPH6AQ9H0K4 717 aa23.73■■□□□ 1.39
ATPAF2-202ENST00000462733 CCDC9Q9Y3X0 531 aaKnown RBP23.73■■□□□ 1.39
ATPAF2-202ENST00000462733 RNF123Q5XPI4 1314 aa23.72■■□□□ 1.39
ATPAF2-202ENST00000462733 FCHSD2O94868 740 aa23.72■■□□□ 1.39
ATPAF2-202ENST00000462733 CARD10Q9BWT7 1032 aa23.72■■□□□ 1.39
ATPAF2-202ENST00000462733 PRKAR2BP31323 418 aa23.71■■□□□ 1.39
ATPAF2-202ENST00000462733 KDRP35968 1356 aa23.7■■□□□ 1.38
ATPAF2-202ENST00000462733 SENP3-EIF4A1A0A087X0R7 540 aa23.69■■□□□ 1.38
ATPAF2-202ENST00000462733 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
ATPAF2-202ENST00000462733 NCAPD2Q15021 1401 aa23.69■■□□□ 1.38
ATPAF2-202ENST00000462733 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.69■■□□□ 1.38
ATPAF2-202ENST00000462733 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
ATPAF2-202ENST00000462733 PNNQ9H307 717 aaKnown RBP23.67■■□□□ 1.38
ATPAF2-202ENST00000462733 VPS72Q15906 364 aa23.67■■□□□ 1.38
ATPAF2-202ENST00000462733 RUNDC1Q96C34 613 aa23.67■■□□□ 1.38
ATPAF2-202ENST00000462733 PLEKHF1Q96S99 279 aa23.67■■□□□ 1.38
ATPAF2-202ENST00000462733 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
ATPAF2-202ENST00000462733 SPATA31A5Q5VU36 1347 aa23.66■■□□□ 1.38
ATPAF2-202ENST00000462733 SPATA31A7Q8IWB4 1347 aa23.66■■□□□ 1.38
ATPAF2-202ENST00000462733 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
ATPAF2-202ENST00000462733 MAPK8IP3Q9UPT6 1336 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms