RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
UBE4B-204ENST00000462658 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
UBE4B-204ENST00000462658 ZNF777Q9ULD5 760 aaPredicted RBP12.01□□□□□ -0.49
UBE4B-204ENST00000462658 ERFEQ4G0M1 354 aa12□□□□□ -0.49
UBE4B-204ENST00000462658 MRGPRX2Q96LB1 330 aa12□□□□□ -0.49
UBE4B-204ENST00000462658 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
UBE4B-204ENST00000462658 WNT7AO00755 349 aa11.99□□□□□ -0.49
UBE4B-204ENST00000462658 VARSP26640 1264 aaKnown RBP11.99□□□□□ -0.49
UBE4B-204ENST00000462658 C1QTNF2Q9BXJ5 285 aa11.99□□□□□ -0.49
UBE4B-204ENST00000462658 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
UBE4B-204ENST00000462658 PCDHB9Q9Y5E1 797 aa11.98□□□□□ -0.49
UBE4B-204ENST00000462658 ARID3CA6NKF2 412 aa11.97□□□□□ -0.49
UBE4B-204ENST00000462658 TNFRSF10AO00220 468 aa11.97□□□□□ -0.49
UBE4B-204ENST00000462658 RGS20O76081 388 aa11.96□□□□□ -0.49
UBE4B-204ENST00000462658 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.49
UBE4B-204ENST00000462658 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.49
UBE4B-204ENST00000462658 SIAH2O43255 324 aa11.95□□□□□ -0.5
UBE4B-204ENST00000462658 GDF9O60383 454 aa11.95□□□□□ -0.5
UBE4B-204ENST00000462658 ARID5BQ14865 1188 aa11.95□□□□□ -0.5
UBE4B-204ENST00000462658 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
UBE4B-204ENST00000462658 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
UBE4B-204ENST00000462658 ADAMTS19Q8TE59 1207 aa11.95□□□□□ -0.5
UBE4B-204ENST00000462658 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
UBE4B-204ENST00000462658 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBE4B-204ENST00000462658 SLC10A4Q96EP9 437 aa11.94□□□□□ -0.5
UBE4B-204ENST00000462658 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
UBE4B-204ENST00000462658 TRMT44Q8IYL2 757 aaKnown RBP11.92□□□□□ -0.5
UBE4B-204ENST00000462658 ALG2Q9H553 416 aa11.92□□□□□ -0.5
UBE4B-204ENST00000462658 SEMA3FQ13275 785 aa11.91□□□□□ -0.5
UBE4B-204ENST00000462658 GLMNQ92990 594 aa11.91□□□□□ -0.5
UBE4B-204ENST00000462658 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
UBE4B-204ENST00000462658 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
UBE4B-204ENST00000462658 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-204ENST00000462658 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-204ENST00000462658 C1orf115Q9H7X2 142 aa11.89□□□□□ -0.51
UBE4B-204ENST00000462658 ALDH1A1P00352 501 aa11.88□□□□□ -0.51
UBE4B-204ENST00000462658 SOX11P35716 441 aa11.88□□□□□ -0.51
UBE4B-204ENST00000462658 SNIP1Q8TAD8 396 aaKnown RBP11.88□□□□□ -0.51
UBE4B-204ENST00000462658 CALR3Q96L12 384 aaKnown RBP11.88□□□□□ -0.51
UBE4B-204ENST00000462658 CDK15Q96Q40 435 aa11.88□□□□□ -0.51
UBE4B-204ENST00000462658 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
UBE4B-204ENST00000462658 CUX1P39880 1505 aa11.87□□□□□ -0.51
UBE4B-204ENST00000462658 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
UBE4B-204ENST00000462658 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
UBE4B-204ENST00000462658 TTC24A2A3L6 582 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-204ENST00000462658 J3QL48 77 aa11.87□□□□□ -0.51
UBE4B-204ENST00000462658 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-204ENST00000462658 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-204ENST00000462658 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
UBE4B-204ENST00000462658 KCTD15Q96SI1 283 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-204ENST00000462658 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
UBE4B-204ENST00000462658 RAB15P59190 212 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 PRR20EP86478 221 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 PRR20CP86479 221 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 PRR20DP86480 221 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 PRR20BP86481 221 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 PRR20AP86496 221 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 TOR4AQ9NXH8 423 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 MAP4K5Q9Y4K4 846 aa11.86□□□□□ -0.51
UBE4B-204ENST00000462658 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-204ENST00000462658 FSHRP23945 695 aa11.85□□□□□ -0.51
UBE4B-204ENST00000462658 GRM5P41594 1212 aa11.85□□□□□ -0.51
UBE4B-204ENST00000462658 MCCD1P59942 119 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-204ENST00000462658 MPNDQ8N594 471 aa11.85□□□□□ -0.51
UBE4B-204ENST00000462658 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
UBE4B-204ENST00000462658 PIK3CDO00329 1044 aa11.84□□□□□ -0.51
UBE4B-204ENST00000462658 CDV3Q9UKY7 258 aaKnown RBP11.84□□□□□ -0.51
UBE4B-204ENST00000462658 ADH1CP00326 375 aa11.83□□□□□ -0.52
UBE4B-204ENST00000462658 NBPF20Q3BBV1 942 aa11.83□□□□□ -0.52
UBE4B-204ENST00000462658 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
UBE4B-204ENST00000462658 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
UBE4B-204ENST00000462658 ESPNB1AK53 854 aa11.82□□□□□ -0.52
UBE4B-204ENST00000462658 INTS6LQ5JSJ4 861 aaKnown RBP11.82□□□□□ -0.52
UBE4B-204ENST00000462658 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
UBE4B-204ENST00000462658 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
UBE4B-204ENST00000462658 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
UBE4B-204ENST00000462658 EIF4G3O43432 1585 aaKnown RBP11.81□□□□□ -0.52
UBE4B-204ENST00000462658 SOGA1O94964 1423 aa11.81□□□□□ -0.52
UBE4B-204ENST00000462658 SMPD1P17405 629 aa11.81□□□□□ -0.52
UBE4B-204ENST00000462658 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
UBE4B-204ENST00000462658 NR3C2P08235 984 aa11.8□□□□□ -0.52
UBE4B-204ENST00000462658 TSGA10IPQ3SY00 556 aa11.8□□□□□ -0.52
UBE4B-204ENST00000462658 PHTF2Q8N3S3 785 aa11.8□□□□□ -0.52
UBE4B-204ENST00000462658 WDR97A6NE52 1622 aa11.79□□□□□ -0.52
UBE4B-204ENST00000462658 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
UBE4B-204ENST00000462658 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
UBE4B-204ENST00000462658 GFRA3O60609 400 aa11.79□□□□□ -0.52
UBE4B-204ENST00000462658 NNTQ13423 1086 aa11.79□□□□□ -0.52
UBE4B-204ENST00000462658 RNF135Q8IUD6 432 aa11.79□□□□□ -0.52
UBE4B-204ENST00000462658 CCDC85AQ96PX6 553 aaPredicted RBP11.79□□□□□ -0.52
UBE4B-204ENST00000462658 NR5A1Q13285 461 aa11.78□□□□□ -0.52
UBE4B-204ENST00000462658 TBC1D9Q6ZT07 1266 aa11.78□□□□□ -0.52
UBE4B-204ENST00000462658 CCDC82Q8N4S0 544 aa11.78□□□□□ -0.52
UBE4B-204ENST00000462658 EEA1Q15075 1411 aa11.77□□□□□ -0.52
UBE4B-204ENST00000462658 ERVH48-1M5A8F1 160 aa11.77□□□□□ -0.53
UBE4B-204ENST00000462658 TMPRSS4Q9NRS4 437 aa11.77□□□□□ -0.53
UBE4B-204ENST00000462658 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
UBE4B-204ENST00000462658 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
UBE4B-204ENST00000462658 FAM187AA6NFU0 413 aa11.76□□□□□ -0.53
UBE4B-204ENST00000462658 SKIP12755 728 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms