RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 OVOS2Q6IE36 1432 aa25.73■■□□□ 1.71
CDKN1A-206ENST00000462537 LTN1O94822 1766 aa25.73■■□□□ 1.71
CDKN1A-206ENST00000462537 RGPD5Q99666 1765 aa25.73■■□□□ 1.71
CDKN1A-206ENST00000462537 THSD7AQ9UPZ6 1657 aa25.71■■□□□ 1.71
CDKN1A-206ENST00000462537 KRT27Q7Z3Y8 459 aa25.71■■□□□ 1.71
CDKN1A-206ENST00000462537 COG3Q96JB2 828 aa25.71■■□□□ 1.71
CDKN1A-206ENST00000462537 KIF20BQ96Q89 1820 aa25.7■■□□□ 1.71
CDKN1A-206ENST00000462537 AXIN2Q9Y2T1 843 aa25.7■■□□□ 1.7
CDKN1A-206ENST00000462537 CRB1P82279 1406 aa25.69■■□□□ 1.7
CDKN1A-206ENST00000462537 ABCC6O95255 1503 aa25.68■■□□□ 1.7
CDKN1A-206ENST00000462537 TOM1L2Q6ZVM7 507 aa25.67■■□□□ 1.7
CDKN1A-206ENST00000462537 TCP11L2Q8N4U5 519 aa25.67■■□□□ 1.7
CDKN1A-206ENST00000462537 CSB-PGBD3P0DP91 1061 aa25.66■■□□□ 1.7
CDKN1A-206ENST00000462537 WDR17Q8IZU2 1322 aa25.65■■□□□ 1.7
CDKN1A-206ENST00000462537 NSD3Q9BZ95 1437 aa25.65■■□□□ 1.7
CDKN1A-206ENST00000462537 BARGINQ6ZT62 677 aa25.65■■□□□ 1.7
CDKN1A-206ENST00000462537 GGNBP2Q9H3C7 697 aa25.65■■□□□ 1.7
CDKN1A-206ENST00000462537 FYB1O15117 783 aa25.64■■□□□ 1.7
CDKN1A-206ENST00000462537 THRAP3Q9Y2W1 955 aaKnown RBP25.64■■□□□ 1.7
CDKN1A-206ENST00000462537 CARD14Q9BXL6 1004 aa25.63■■□□□ 1.69
CDKN1A-206ENST00000462537 EP400Q96L91 3159 aa25.62■■□□□ 1.69
CDKN1A-206ENST00000462537 WNK3Q9BYP7 1800 aa25.59■■□□□ 1.69
CDKN1A-206ENST00000462537 FAM182BQ5T319 152 aa25.59■■□□□ 1.69
CDKN1A-206ENST00000462537 CCDC125Q86Z20 511 aa25.59■■□□□ 1.69
CDKN1A-206ENST00000462537 PARP4Q9UKK3 1724 aaKnown RBP25.58■■□□□ 1.69
CDKN1A-206ENST00000462537 BLMP54132 1417 aaPredicted RBP25.57■■□□□ 1.68
CDKN1A-206ENST00000462537 C11orf95C9JLR9 678 aaPredicted RBP25.57■■□□□ 1.68
CDKN1A-206ENST00000462537 FBLN1P23142 703 aa25.57■■□□□ 1.68
CDKN1A-206ENST00000462537 PDE3BQ13370 1112 aa25.57■■□□□ 1.68
CDKN1A-206ENST00000462537 AMPHP49418 695 aa25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 SF3B2Q13435 895 aaKnown RBP25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 ANKRD24Q8TF21 1146 aa25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 CARD10Q9BWT7 1032 aa25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 ERBB3P21860 1342 aa25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 CGNL1Q0VF96 1302 aa25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 MAP3K19Q56UN5 1328 aa25.56■■□□□ 1.68
CDKN1A-206ENST00000462537 IP6K1Q92551 441 aa25.55■■□□□ 1.68
CDKN1A-206ENST00000462537 PANK3Q9H999 370 aa25.54■■□□□ 1.68
CDKN1A-206ENST00000462537 NLRP2Q9NX02 1062 aa25.54■■□□□ 1.68
CDKN1A-206ENST00000462537 LRRC37A3O60309 1634 aa25.53■■□□□ 1.68
CDKN1A-206ENST00000462537 RRS1Q15050 365 aaKnown RBP25.53■■□□□ 1.68
CDKN1A-206ENST00000462537 LTV1Q96GA3 475 aaPredicted RBP25.53■■□□□ 1.68
CDKN1A-206ENST00000462537 CCDC7Q96M83 1385 aa25.53■■□□□ 1.68
CDKN1A-206ENST00000462537 KIF7Q2M1P5 1343 aa25.51■■□□□ 1.67
CDKN1A-206ENST00000462537 FAM208AQ9UK61 1670 aaKnown RBP25.51■■□□□ 1.67
CDKN1A-206ENST00000462537 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.67
CDKN1A-206ENST00000462537 RTL1A6NKG5 1358 aa25.5■■□□□ 1.67
CDKN1A-206ENST00000462537 HOXC9P31274 260 aa25.5■■□□□ 1.67
CDKN1A-206ENST00000462537 DDB1Q16531 1140 aa25.5■■□□□ 1.67
CDKN1A-206ENST00000462537 CDCA7Q9BWT1 371 aaPredicted RBP25.5■■□□□ 1.67
CDKN1A-206ENST00000462537 ANKRD26Q9UPS8 1709 aa25.49■■□□□ 1.67
CDKN1A-206ENST00000462537 FAM196AQ6ZSG2 479 aa25.49■■□□□ 1.67
CDKN1A-206ENST00000462537 DISP2A7MBM2 1401 aa25.46■■□□□ 1.67
CDKN1A-206ENST00000462537 PEAK1Q9H792 1746 aa25.45■■□□□ 1.66
CDKN1A-206ENST00000462537 DEFB132Q7Z7B7 95 aa25.44■■□□□ 1.66
CDKN1A-206ENST00000462537 SMG6Q86US8 1419 aaKnown RBP25.44■■□□□ 1.66
CDKN1A-206ENST00000462537 RGPD2P0DJD1 1756 aa25.44■■□□□ 1.66
CDKN1A-206ENST00000462537 TNS1Q9HBL0 1735 aaKnown RBP25.43■■□□□ 1.66
CDKN1A-206ENST00000462537 TRIM37O94972 964 aa25.43■■□□□ 1.66
CDKN1A-206ENST00000462537 BAG6P46379 1132 aa25.43■■□□□ 1.66
CDKN1A-206ENST00000462537 OVOS2A0A0G2JMS6 1433 aa25.43■■□□□ 1.66
CDKN1A-206ENST00000462537 FLT4P35916 1363 aa25.43■■□□□ 1.66
CDKN1A-206ENST00000462537 EXOC5O00471 708 aa25.42■■□□□ 1.66
CDKN1A-206ENST00000462537 KNSTRNQ9Y448 316 aa25.42■■□□□ 1.66
CDKN1A-206ENST00000462537 EMILIN1Q9Y6C2 1016 aa25.42■■□□□ 1.66
CDKN1A-206ENST00000462537 MAP2P11137 1827 aaKnown RBP25.42■■□□□ 1.66
CDKN1A-206ENST00000462537 PPM1GO15355 546 aaPredicted RBP25.41■■□□□ 1.66
CDKN1A-206ENST00000462537 IL2RBP14784 551 aa25.41■■□□□ 1.66
CDKN1A-206ENST00000462537 TNNT2P45379 298 aaPredicted RBP25.41■■□□□ 1.66
CDKN1A-206ENST00000462537 NSD2O96028 1365 aa25.41■■□□□ 1.66
CDKN1A-206ENST00000462537 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
CDKN1A-206ENST00000462537 TNS2Q63HR2 1409 aa25.39■■□□□ 1.66
CDKN1A-206ENST00000462537 HSP90AB2PQ58FF8 381 aa25.39■■□□□ 1.66
CDKN1A-206ENST00000462537 INSRP06213 1382 aa25.39■■□□□ 1.65
CDKN1A-206ENST00000462537 MARCH10Q8NA82 808 aaPredicted RBP25.38■■□□□ 1.65
CDKN1A-206ENST00000462537 WASHC2AQ641Q2 1341 aa25.36■■□□□ 1.65
CDKN1A-206ENST00000462537 EN1Q05925 392 aaPredicted RBP25.35■■□□□ 1.65
CDKN1A-206ENST00000462537 MORC1Q86VD1 984 aa25.35■■□□□ 1.65
CDKN1A-206ENST00000462537 SBF2Q86WG5 1849 aa25.35■■□□□ 1.65
CDKN1A-206ENST00000462537 APBA3O96018 575 aa25.34■■□□□ 1.65
CDKN1A-206ENST00000462537 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
CDKN1A-206ENST00000462537 USHBP1Q8N6Y0 703 aa25.33■■□□□ 1.65
CDKN1A-206ENST00000462537 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
CDKN1A-206ENST00000462537 POLKQ9UBT6 870 aa25.33■■□□□ 1.65
CDKN1A-206ENST00000462537 MEGF6O75095 1541 aa25.28■■□□□ 1.64
CDKN1A-206ENST00000462537 AMER1Q5JTC6 1135 aaPredicted RBP25.28■■□□□ 1.64
CDKN1A-206ENST00000462537 BCL9O00512 1426 aa25.28■■□□□ 1.64
CDKN1A-206ENST00000462537 EZH2Q15910 746 aaKnown RBP25.27■■□□□ 1.64
CDKN1A-206ENST00000462537 DDX54Q8TDD1 881 aaKnown RBP25.27■■□□□ 1.64
CDKN1A-206ENST00000462537 RAPGEF4Q8WZA2 1011 aa25.27■■□□□ 1.64
CDKN1A-206ENST00000462537 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
CDKN1A-206ENST00000462537 BCL11BQ9C0K0 894 aaPredicted RBP25.25■■□□□ 1.63
CDKN1A-206ENST00000462537 TATP17735 454 aaPredicted RBP25.24■■□□□ 1.63
CDKN1A-206ENST00000462537 CC2D1BQ5T0F9 858 aaKnown RBP25.24■■□□□ 1.63
CDKN1A-206ENST00000462537 ZCRB1Q8TBF4 217 aaKnown RBP25.24■■□□□ 1.63
CDKN1A-206ENST00000462537 CAMKK2Q96RR4 588 aa25.24■■□□□ 1.63
CDKN1A-206ENST00000462537 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
CDKN1A-206ENST00000462537 NHSQ6T4R5 1651 aa25.23■■□□□ 1.63
CDKN1A-206ENST00000462537 PARD3Q8TEW0 1356 aa25.23■■□□□ 1.63
CDKN1A-206ENST00000462537 CNGB1Q14028 1251 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms