RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 EMILIN1Q9Y6C2 1016 aa26.16■■□□□ 1.78
XPA-202ENST00000462523 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.16■■□□□ 1.78
XPA-202ENST00000462523 BTG4Q9NY30 223 aa26.16■■□□□ 1.78
XPA-202ENST00000462523 PARD3Q8TEW0 1356 aa26.15■■□□□ 1.78
XPA-202ENST00000462523 SMG6Q86US8 1419 aaKnown RBP26.15■■□□□ 1.78
XPA-202ENST00000462523 RGS17Q9UGC6 210 aaPredicted RBP26.15■■□□□ 1.78
XPA-202ENST00000462523 COL5A2P05997 1499 aaPredicted RBP26.14■■□□□ 1.77
XPA-202ENST00000462523 HOXC9P31274 260 aa26.12■■□□□ 1.77
XPA-202ENST00000462523 RTL1A6NKG5 1358 aa26.12■■□□□ 1.77
XPA-202ENST00000462523 IP6K1Q92551 441 aa26.12■■□□□ 1.77
XPA-202ENST00000462523 USP21Q9UK80 565 aa26.11■■□□□ 1.77
XPA-202ENST00000462523 FLT4P35916 1363 aa26.1■■□□□ 1.77
XPA-202ENST00000462523 KIF24Q5T7B8 1368 aa26.1■■□□□ 1.77
XPA-202ENST00000462523 AMPHP49418 695 aa26.1■■□□□ 1.77
XPA-202ENST00000462523 UNC5CLQ8IV45 518 aa26.09■■□□□ 1.77
XPA-202ENST00000462523 BLMP54132 1417 aaPredicted RBP26.09■■□□□ 1.77
XPA-202ENST00000462523 PPM1GO15355 546 aaPredicted RBP26.07■■□□□ 1.76
XPA-202ENST00000462523 HSP90AB2PQ58FF8 381 aa26.07■■□□□ 1.76
XPA-202ENST00000462523 CDK12Q9NYV4 1490 aaPredicted RBP26.07■■□□□ 1.76
XPA-202ENST00000462523 ATRNO75882 1429 aa26.06■■□□□ 1.76
XPA-202ENST00000462523 PPP2R1AP30153 589 aa26.06■■□□□ 1.76
XPA-202ENST00000462523 PHF23Q9BUL5 403 aaPredicted RBP26.06■■□□□ 1.76
XPA-202ENST00000462523 ERBB3P21860 1342 aa26.06■■□□□ 1.76
XPA-202ENST00000462523 INSRP06213 1382 aa26.06■■□□□ 1.76
XPA-202ENST00000462523 MTHFSP49914 203 aa26.05■■□□□ 1.76
XPA-202ENST00000462523 PRKRIP1Q9H875 184 aaPredicted RBP26.05■■□□□ 1.76
XPA-202ENST00000462523 STRN4Q9NRL3 753 aa26.05■■□□□ 1.76
XPA-202ENST00000462523 RALBP1Q15311 655 aa26.03■■□□□ 1.76
XPA-202ENST00000462523 ZNF772Q68DY9 489 aaPredicted RBP26.03■■□□□ 1.76
XPA-202ENST00000462523 LARP1Q6PKG0 1096 aaKnown RBP26.03■■□□□ 1.76
XPA-202ENST00000462523 RGPD2P0DJD1 1756 aa26.03■■□□□ 1.76
XPA-202ENST00000462523 ANKRD24Q8TF21 1146 aa26.03■■□□□ 1.76
XPA-202ENST00000462523 WDR17Q8IZU2 1322 aa26.02■■□□□ 1.76
XPA-202ENST00000462523 GLI3P10071 1580 aa26.02■■□□□ 1.76
XPA-202ENST00000462523 VPS72Q15906 364 aa26.01■■□□□ 1.75
XPA-202ENST00000462523 POTEAQ6S8J7 498 aa26.01■■□□□ 1.75
XPA-202ENST00000462523 FAM208AQ9UK61 1670 aaKnown RBP26.01■■□□□ 1.75
XPA-202ENST00000462523 COL3A1P02461 1466 aaPredicted RBP26■■□□□ 1.75
XPA-202ENST00000462523 EVA1CP58658 441 aa26■■□□□ 1.75
XPA-202ENST00000462523 LTV1Q96GA3 475 aaPredicted RBP26■■□□□ 1.75
XPA-202ENST00000462523 QTRT2Q9H974 415 aaKnown RBP26■■□□□ 1.75
XPA-202ENST00000462523 TRPC5Q9UL62 973 aaPredicted RBP25.99■■□□□ 1.75
XPA-202ENST00000462523 CRB1P82279 1406 aa25.99■■□□□ 1.75
XPA-202ENST00000462523 SPATA31A5Q5VU36 1347 aa25.98■■□□□ 1.75
XPA-202ENST00000462523 SPATA31A7Q8IWB4 1347 aa25.98■■□□□ 1.75
XPA-202ENST00000462523 SPATA31A1Q5TZJ5 1347 aa25.96■■□□□ 1.75
XPA-202ENST00000462523 MYBBP1AQ9BQG0 1328 aaKnown RBP25.96■■□□□ 1.75
XPA-202ENST00000462523 EIF4A2Q14240 407 aaKnown RBP25.96■■□□□ 1.75
XPA-202ENST00000462523 CSB-PGBD3P0DP91 1061 aa25.95■■□□□ 1.75
XPA-202ENST00000462523 GJD4Q96KN9 370 aaPredicted RBP25.95■■□□□ 1.75
XPA-202ENST00000462523 TOM1L2Q6ZVM7 507 aa25.95■■□□□ 1.74
XPA-202ENST00000462523 RGPD1P0DJD0 1748 aa25.94■■□□□ 1.74
XPA-202ENST00000462523 WNK3Q9BYP7 1800 aa25.93■■□□□ 1.74
XPA-202ENST00000462523 CCDC9Q9Y3X0 531 aaKnown RBP25.93■■□□□ 1.74
XPA-202ENST00000462523 NBPF6Q5VWK0 638 aa25.92■■□□□ 1.74
XPA-202ENST00000462523 NBPF4Q96M43 638 aa25.92■■□□□ 1.74
XPA-202ENST00000462523 CARD10Q9BWT7 1032 aa25.92■■□□□ 1.74
XPA-202ENST00000462523 USP35Q9P2H5 1018 aa25.92■■□□□ 1.74
XPA-202ENST00000462523 ANP32CO43423 234 aa25.91■■□□□ 1.74
XPA-202ENST00000462523 IL13P35225 146 aa25.91■■□□□ 1.74
XPA-202ENST00000462523 NLRP2Q9NX02 1062 aa25.91■■□□□ 1.74
XPA-202ENST00000462523 NCAPD2Q15021 1401 aa25.9■■□□□ 1.74
XPA-202ENST00000462523 RBM6P78332 1123 aaKnown RBP25.89■■□□□ 1.73
XPA-202ENST00000462523 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.73
XPA-202ENST00000462523 EYA1Q99502 592 aa25.89■■□□□ 1.73
XPA-202ENST00000462523 THSD7AQ9UPZ6 1657 aa25.88■■□□□ 1.73
XPA-202ENST00000462523 USHBP1Q8N6Y0 703 aa25.88■■□□□ 1.73
XPA-202ENST00000462523 TCP11L2Q8N4U5 519 aa25.87■■□□□ 1.73
XPA-202ENST00000462523 DIAPH1O60610 1272 aaKnown RBP25.86■■□□□ 1.73
XPA-202ENST00000462523 RXRBP28702 533 aa25.86■■□□□ 1.73
XPA-202ENST00000462523 IGSF1Q8N6C5 1336 aa25.86■■□□□ 1.73
XPA-202ENST00000462523 DISP2A7MBM2 1401 aa25.86■■□□□ 1.73
XPA-202ENST00000462523 FAM98CQ17RN3 349 aaKnown RBP25.86■■□□□ 1.73
XPA-202ENST00000462523 BARGINQ6ZT62 677 aa25.85■■□□□ 1.73
XPA-202ENST00000462523 CFAP53Q96M91 514 aa25.85■■□□□ 1.73
XPA-202ENST00000462523 THRAP3Q9Y2W1 955 aaKnown RBP25.85■■□□□ 1.73
XPA-202ENST00000462523 ONECUT3O60422 494 aaPredicted RBP25.84■■□□□ 1.73
XPA-202ENST00000462523 CCDC184Q52MB2 194 aa25.83■■□□□ 1.73
XPA-202ENST00000462523 RGS12O14924 1447 aa25.83■■□□□ 1.73
XPA-202ENST00000462523 PARP4Q9UKK3 1724 aaKnown RBP25.82■■□□□ 1.72
XPA-202ENST00000462523 MEGF6O75095 1541 aa25.82■■□□□ 1.72
XPA-202ENST00000462523 LRRC37A3O60309 1634 aa25.81■■□□□ 1.72
XPA-202ENST00000462523 BRWD3Q6RI45 1802 aa25.8■■□□□ 1.72
XPA-202ENST00000462523 AEBP1Q8IUX7 1158 aa25.8■■□□□ 1.72
XPA-202ENST00000462523 KDRP35968 1356 aa25.79■■□□□ 1.72
XPA-202ENST00000462523 U2SURPO15042 1029 aaKnown RBP25.77■■□□□ 1.72
XPA-202ENST00000462523 IL2RBP14784 551 aa25.77■■□□□ 1.72
XPA-202ENST00000462523 SULT6B1Q6IMI4 303 aa25.77■■□□□ 1.72
XPA-202ENST00000462523 SEPT12Q8IYM1 358 aa25.77■■□□□ 1.72
XPA-202ENST00000462523 SHANK3Q9BYB0 1731 aa25.76■■□□□ 1.72
XPA-202ENST00000462523 HMOX1P09601 288 aa25.75■■□□□ 1.71
XPA-202ENST00000462523 OVOS2A0A0G2JMS6 1433 aa25.75■■□□□ 1.71
XPA-202ENST00000462523 EP400Q96L91 3159 aa25.74■■□□□ 1.71
XPA-202ENST00000462523 PKD1L3Q7Z443 1732 aa25.73■■□□□ 1.71
XPA-202ENST00000462523 CDCA7Q9BWT1 371 aaPredicted RBP25.73■■□□□ 1.71
XPA-202ENST00000462523 NUDCQ9Y266 331 aa25.73■■□□□ 1.71
XPA-202ENST00000462523 A0A0G2JS52 829 aa25.72■■□□□ 1.71
XPA-202ENST00000462523 MYT1Q01538 1121 aa25.72■■□□□ 1.71
XPA-202ENST00000462523 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
XPA-202ENST00000462523 U2AF1L5P0DN76 240 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms