RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-216ENST00000462421 CRB1P82279 1406 aa12.34□□□□□ -0.43
DDX39B-216ENST00000462421 GLI3P10071 1580 aa12.34□□□□□ -0.43
DDX39B-216ENST00000462421 SLIT3O75094 1523 aa12.33□□□□□ -0.44
DDX39B-216ENST00000462421 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-216ENST00000462421 SMG6Q86US8 1419 aaKnown RBP12.33□□□□□ -0.44
DDX39B-216ENST00000462421 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
DDX39B-216ENST00000462421 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
DDX39B-216ENST00000462421 DDB1Q16531 1140 aa12.32□□□□□ -0.44
DDX39B-216ENST00000462421 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
DDX39B-216ENST00000462421 NLRP2Q9NX02 1062 aa12.32□□□□□ -0.44
DDX39B-216ENST00000462421 AKAP12Q02952 1782 aa12.32□□□□□ -0.44
DDX39B-216ENST00000462421 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
DDX39B-216ENST00000462421 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
DDX39B-216ENST00000462421 COL5A2P05997 1499 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-216ENST00000462421 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
DDX39B-216ENST00000462421 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
DDX39B-216ENST00000462421 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
DDX39B-216ENST00000462421 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
DDX39B-216ENST00000462421 HSPA5P11021 654 aaKnown RBP12.3□□□□□ -0.44
DDX39B-216ENST00000462421 ABCC6O95255 1503 aa12.29□□□□□ -0.44
DDX39B-216ENST00000462421 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
DDX39B-216ENST00000462421 EXOC5O00471 708 aa12.28□□□□□ -0.44
DDX39B-216ENST00000462421 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
DDX39B-216ENST00000462421 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-216ENST00000462421 CAMTA1Q9Y6Y1 1673 aa12.28□□□□□ -0.44
DDX39B-216ENST00000462421 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
DDX39B-216ENST00000462421 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.45
DDX39B-216ENST00000462421 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.45
DDX39B-216ENST00000462421 PPM1GO15355 546 aaPredicted RBP12.26□□□□□ -0.45
DDX39B-216ENST00000462421 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
DDX39B-216ENST00000462421 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
DDX39B-216ENST00000462421 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
DDX39B-216ENST00000462421 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
DDX39B-216ENST00000462421 TRIM37O94972 964 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 APBA3O96018 575 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 IL2RBP14784 551 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 IP6K1Q92551 441 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 ERBB3P21860 1342 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 NFAT5O94916 1531 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 LMO7Q8WWI1 1683 aa12.25□□□□□ -0.45
DDX39B-216ENST00000462421 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
DDX39B-216ENST00000462421 NBPF14Q5TI25 921 aa12.24□□□□□ -0.45
DDX39B-216ENST00000462421 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
DDX39B-216ENST00000462421 FYB1O15117 783 aa12.23□□□□□ -0.45
DDX39B-216ENST00000462421 HOXC9P31274 260 aa12.23□□□□□ -0.45
DDX39B-216ENST00000462421 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
DDX39B-216ENST00000462421 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
DDX39B-216ENST00000462421 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
DDX39B-216ENST00000462421 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
DDX39B-216ENST00000462421 NSD2O96028 1365 aa12.21□□□□□ -0.45
DDX39B-216ENST00000462421 FLT4P35916 1363 aa12.21□□□□□ -0.45
DDX39B-216ENST00000462421 KIF24Q5T7B8 1368 aa12.21□□□□□ -0.45
DDX39B-216ENST00000462421 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.45
DDX39B-216ENST00000462421 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
DDX39B-216ENST00000462421 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
DDX39B-216ENST00000462421 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
DDX39B-216ENST00000462421 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
DDX39B-216ENST00000462421 PANK3Q9H999 370 aa12.2□□□□□ -0.46
DDX39B-216ENST00000462421 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
DDX39B-216ENST00000462421 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
DDX39B-216ENST00000462421 TATP17735 454 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-216ENST00000462421 HMGB2P26583 209 aaKnown RBP12.19□□□□□ -0.46
DDX39B-216ENST00000462421 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-216ENST00000462421 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
DDX39B-216ENST00000462421 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
DDX39B-216ENST00000462421 LTN1O94822 1766 aa12.18□□□□□ -0.46
DDX39B-216ENST00000462421 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-216ENST00000462421 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-216ENST00000462421 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
DDX39B-216ENST00000462421 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
DDX39B-216ENST00000462421 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
DDX39B-216ENST00000462421 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
DDX39B-216ENST00000462421 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
DDX39B-216ENST00000462421 INSRP06213 1382 aa12.16□□□□□ -0.46
DDX39B-216ENST00000462421 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
DDX39B-216ENST00000462421 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
DDX39B-216ENST00000462421 LRRC37A3O60309 1634 aa12.15□□□□□ -0.47
DDX39B-216ENST00000462421 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
DDX39B-216ENST00000462421 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
DDX39B-216ENST00000462421 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
DDX39B-216ENST00000462421 COL18A1P39060 1754 aa12.14□□□□□ -0.47
DDX39B-216ENST00000462421 KIF7Q2M1P5 1343 aa12.13□□□□□ -0.47
DDX39B-216ENST00000462421 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
DDX39B-216ENST00000462421 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
DDX39B-216ENST00000462421 HSP90AB2PQ58FF8 381 aa12.13□□□□□ -0.47
DDX39B-216ENST00000462421 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
DDX39B-216ENST00000462421 MYOM1P52179 1685 aa12.13□□□□□ -0.47
DDX39B-216ENST00000462421 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-216ENST00000462421 FBLN1P23142 703 aa12.12□□□□□ -0.47
DDX39B-216ENST00000462421 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
DDX39B-216ENST00000462421 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
DDX39B-216ENST00000462421 BCL9O00512 1426 aa12.11□□□□□ -0.47
DDX39B-216ENST00000462421 PLSCR1O15162 318 aa12.11□□□□□ -0.47
DDX39B-216ENST00000462421 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-216ENST00000462421 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
DDX39B-216ENST00000462421 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-216ENST00000462421 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
DDX39B-216ENST00000462421 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms