RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ABCC6O95255 1503 aa16.05■□□□□ 0.16
CPNE1-221ENST00000462352 EMILIN1Q9Y6C2 1016 aa16.05■□□□□ 0.16
CPNE1-221ENST00000462352 AMPHP49418 695 aa16.04■□□□□ 0.16
CPNE1-221ENST00000462352 IP6K1Q92551 441 aa16.04■□□□□ 0.16
CPNE1-221ENST00000462352 NRAPQ86VF7 1730 aa16.04■□□□□ 0.16
CPNE1-221ENST00000462352 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.04■□□□□ 0.16
CPNE1-221ENST00000462352 RTL1A6NKG5 1358 aa16.03■□□□□ 0.16
CPNE1-221ENST00000462352 HOXC9P31274 260 aa16.03■□□□□ 0.16
CPNE1-221ENST00000462352 STRN4Q9NRL3 753 aa16.03■□□□□ 0.16
CPNE1-221ENST00000462352 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
CPNE1-221ENST00000462352 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-221ENST00000462352 KIF24Q5T7B8 1368 aa16.02■□□□□ 0.16
CPNE1-221ENST00000462352 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.16
CPNE1-221ENST00000462352 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-221ENST00000462352 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
CPNE1-221ENST00000462352 ATRNO75882 1429 aa16.02■□□□□ 0.15
CPNE1-221ENST00000462352 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.15
CPNE1-221ENST00000462352 FLT4P35916 1363 aa16.01■□□□□ 0.15
CPNE1-221ENST00000462352 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
CPNE1-221ENST00000462352 PPM1GO15355 546 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-221ENST00000462352 EVA1CP58658 441 aa16.01■□□□□ 0.15
CPNE1-221ENST00000462352 POTEAQ6S8J7 498 aa16.01■□□□□ 0.15
CPNE1-221ENST00000462352 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
CPNE1-221ENST00000462352 RGPD5Q99666 1765 aa16■□□□□ 0.15
CPNE1-221ENST00000462352 VPS72Q15906 364 aa16■□□□□ 0.15
CPNE1-221ENST00000462352 PARD3Q8TEW0 1356 aa16■□□□□ 0.15
CPNE1-221ENST00000462352 ERBB3P21860 1342 aa15.99■□□□□ 0.15
CPNE1-221ENST00000462352 HSP90AB2PQ58FF8 381 aa15.99■□□□□ 0.15
CPNE1-221ENST00000462352 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
CPNE1-221ENST00000462352 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
CPNE1-221ENST00000462352 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
CPNE1-221ENST00000462352 ANKRD24Q8TF21 1146 aa15.98■□□□□ 0.15
CPNE1-221ENST00000462352 CCDC9Q9Y3X0 531 aaKnown RBP15.98■□□□□ 0.15
CPNE1-221ENST00000462352 INSRP06213 1382 aa15.98■□□□□ 0.15
CPNE1-221ENST00000462352 LTV1Q96GA3 475 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-221ENST00000462352 GJD4Q96KN9 370 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-221ENST00000462352 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 CRB1P82279 1406 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 PPP2R1AP30153 589 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 MTHFSP49914 203 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
CPNE1-221ENST00000462352 RALBP1Q15311 655 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
CPNE1-221ENST00000462352 CDK12Q9NYV4 1490 aaPredicted RBP15.96■□□□□ 0.14
CPNE1-221ENST00000462352 GLI3P10071 1580 aa15.96■□□□□ 0.14
CPNE1-221ENST00000462352 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
CPNE1-221ENST00000462352 RXRBP28702 533 aa15.95■□□□□ 0.14
CPNE1-221ENST00000462352 PRKRIP1Q9H875 184 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-221ENST00000462352 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
CPNE1-221ENST00000462352 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
CPNE1-221ENST00000462352 CARD10Q9BWT7 1032 aa15.93■□□□□ 0.14
CPNE1-221ENST00000462352 EIF4A2Q14240 407 aaKnown RBP15.92■□□□□ 0.14
CPNE1-221ENST00000462352 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
CPNE1-221ENST00000462352 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
CPNE1-221ENST00000462352 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
CPNE1-221ENST00000462352 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
CPNE1-221ENST00000462352 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
CPNE1-221ENST00000462352 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
CPNE1-221ENST00000462352 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
CPNE1-221ENST00000462352 ONECUT3O60422 494 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-221ENST00000462352 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
CPNE1-221ENST00000462352 RGPD2P0DJD1 1756 aa15.89■□□□□ 0.13
CPNE1-221ENST00000462352 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-221ENST00000462352 RGS12O14924 1447 aa15.88■□□□□ 0.13
CPNE1-221ENST00000462352 ANP32CO43423 234 aa15.88■□□□□ 0.13
CPNE1-221ENST00000462352 IL13P35225 146 aa15.88■□□□□ 0.13
CPNE1-221ENST00000462352 USHBP1Q8N6Y0 703 aa15.88■□□□□ 0.13
CPNE1-221ENST00000462352 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
CPNE1-221ENST00000462352 EYA1Q99502 592 aa15.88■□□□□ 0.13
CPNE1-221ENST00000462352 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
CPNE1-221ENST00000462352 A0A0G2JS52 829 aa15.86■□□□□ 0.13
CPNE1-221ENST00000462352 MYT1Q01538 1121 aa15.86■□□□□ 0.13
CPNE1-221ENST00000462352 SEPT12Q8IYM1 358 aa15.86■□□□□ 0.13
CPNE1-221ENST00000462352 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
CPNE1-221ENST00000462352 THSD7AQ9UPZ6 1657 aa15.86■□□□□ 0.13
CPNE1-221ENST00000462352 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
CPNE1-221ENST00000462352 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
CPNE1-221ENST00000462352 WNK3Q9BYP7 1800 aa15.84■□□□□ 0.13
CPNE1-221ENST00000462352 IL2RBP14784 551 aa15.84■□□□□ 0.13
CPNE1-221ENST00000462352 CDCA7Q9BWT1 371 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-221ENST00000462352 RGPD1P0DJD0 1748 aa15.84■□□□□ 0.13
CPNE1-221ENST00000462352 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
CPNE1-221ENST00000462352 ILDR2Q71H61 639 aa15.82■□□□□ 0.12
CPNE1-221ENST00000462352 RAPGEF4Q8WZA2 1011 aa15.82■□□□□ 0.12
CPNE1-221ENST00000462352 MEGF6O75095 1541 aa15.82■□□□□ 0.12
CPNE1-221ENST00000462352 U2SURPO15042 1029 aaKnown RBP15.81■□□□□ 0.12
CPNE1-221ENST00000462352 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
CPNE1-221ENST00000462352 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
CPNE1-221ENST00000462352 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
CPNE1-221ENST00000462352 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
CPNE1-221ENST00000462352 OVOS2A0A0G2JMS6 1433 aa15.8■□□□□ 0.12
CPNE1-221ENST00000462352 KDRP35968 1356 aa15.8■□□□□ 0.12
CPNE1-221ENST00000462352 TATP17735 454 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-221ENST00000462352 DDB1Q16531 1140 aa15.8■□□□□ 0.12
CPNE1-221ENST00000462352 SULT6B1Q6IMI4 303 aa15.8■□□□□ 0.12
CPNE1-221ENST00000462352 EXOC5O00471 708 aa15.79■□□□□ 0.12
CPNE1-221ENST00000462352 HMOX1P09601 288 aa15.79■□□□□ 0.12
CPNE1-221ENST00000462352 BRWD3Q6RI45 1802 aa15.79■□□□□ 0.12
CPNE1-221ENST00000462352 TNS2Q63HR2 1409 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms