RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 PLEKHG5O94827 1062 aa26.37■■□□□ 1.81
PTPN18-207ENST00000462321 RUNDC1Q96C34 613 aa26.37■■□□□ 1.81
PTPN18-207ENST00000462321 LRRC59Q96AG4 307 aaKnown RBP26.36■■□□□ 1.81
PTPN18-207ENST00000462321 FCHSD2O94868 740 aa26.34■■□□□ 1.81
PTPN18-207ENST00000462321 CABLES1Q8TDN4 633 aa26.34■■□□□ 1.81
PTPN18-207ENST00000462321 PNNQ9H307 717 aaKnown RBP26.34■■□□□ 1.81
PTPN18-207ENST00000462321 PIP4K2BP78356 416 aa26.34■■□□□ 1.81
PTPN18-207ENST00000462321 CPDO75976 1380 aa26.33■■□□□ 1.81
PTPN18-207ENST00000462321 RGPD1P0DJD0 1748 aa26.33■■□□□ 1.81
PTPN18-207ENST00000462321 PLEKHF1Q96S99 279 aa26.32■■□□□ 1.8
PTPN18-207ENST00000462321 RSPH6AQ9H0K4 717 aa26.32■■□□□ 1.8
PTPN18-207ENST00000462321 ABCC6O95255 1503 aa26.32■■□□□ 1.8
PTPN18-207ENST00000462321 ZBTB7CA1YPR0 619 aa26.31■■□□□ 1.8
PTPN18-207ENST00000462321 COL16A1Q07092 1604 aaPredicted RBP26.31■■□□□ 1.8
PTPN18-207ENST00000462321 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
PTPN18-207ENST00000462321 APAF1O14727 1248 aa26.31■■□□□ 1.8
PTPN18-207ENST00000462321 ZC3H6P61129 1189 aaKnown RBP26.31■■□□□ 1.8
PTPN18-207ENST00000462321 NGEFQ8N5V2 710 aa26.31■■□□□ 1.8
PTPN18-207ENST00000462321 PHLPP1O60346 1717 aa26.31■■□□□ 1.8
PTPN18-207ENST00000462321 ABCA3Q99758 1704 aa26.3■■□□□ 1.8
PTPN18-207ENST00000462321 COL22A1Q8NFW1 1626 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-207ENST00000462321 HMOX1P09601 288 aa26.28■■□□□ 1.8
PTPN18-207ENST00000462321 IGSF1Q8N6C5 1336 aa26.27■■□□□ 1.8
PTPN18-207ENST00000462321 MAPK8IP3Q9UPT6 1336 aa26.27■■□□□ 1.8
PTPN18-207ENST00000462321 KIAA0232Q92628 1395 aa26.27■■□□□ 1.8
PTPN18-207ENST00000462321 PRKAR2BP31323 418 aa26.27■■□□□ 1.8
PTPN18-207ENST00000462321 TCP11L2Q8N4U5 519 aa26.26■■□□□ 1.79
PTPN18-207ENST00000462321 SALL2Q9Y467 1007 aaPredicted RBP26.26■■□□□ 1.79
PTPN18-207ENST00000462321 HAP1P54257 671 aaPredicted RBP26.25■■□□□ 1.79
PTPN18-207ENST00000462321 EYA1Q99502 592 aa26.25■■□□□ 1.79
PTPN18-207ENST00000462321 KDRP35968 1356 aa26.25■■□□□ 1.79
PTPN18-207ENST00000462321 NCBP3Q53F19 620 aaKnown RBP26.25■■□□□ 1.79
PTPN18-207ENST00000462321 SULT6B1Q6IMI4 303 aa26.25■■□□□ 1.79
PTPN18-207ENST00000462321 NEFMP07197 916 aa26.24■■□□□ 1.79
PTPN18-207ENST00000462321 LTV1Q96GA3 475 aaPredicted RBP26.24■■□□□ 1.79
PTPN18-207ENST00000462321 COL18A1P39060 1754 aa26.23■■□□□ 1.79
PTPN18-207ENST00000462321 AXIN2Q9Y2T1 843 aa26.23■■□□□ 1.79
PTPN18-207ENST00000462321 AEBP1Q8IUX7 1158 aa26.22■■□□□ 1.79
PTPN18-207ENST00000462321 ZNF521Q96K83 1311 aa26.22■■□□□ 1.79
PTPN18-207ENST00000462321 PDE3BQ13370 1112 aa26.21■■□□□ 1.79
PTPN18-207ENST00000462321 ANKRD24Q8TF21 1146 aa26.21■■□□□ 1.79
PTPN18-207ENST00000462321 PRDM11Q9NQV5 511 aa26.2■■□□□ 1.79
PTPN18-207ENST00000462321 ERBB3P21860 1342 aa26.2■■□□□ 1.79
PTPN18-207ENST00000462321 CHRNA2Q15822 529 aa26.19■■□□□ 1.78
PTPN18-207ENST00000462321 CCDC27Q2M243 656 aa26.19■■□□□ 1.78
PTPN18-207ENST00000462321 TMPOP42166 694 aaKnown RBP26.18■■□□□ 1.78
PTPN18-207ENST00000462321 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
PTPN18-207ENST00000462321 RRP7AQ9Y3A4 280 aaKnown RBP26.18■■□□□ 1.78
PTPN18-207ENST00000462321 NCAPD2Q15021 1401 aa26.18■■□□□ 1.78
PTPN18-207ENST00000462321 PHACTR3Q96KR7 559 aa26.17■■□□□ 1.78
PTPN18-207ENST00000462321 LMO7Q8WWI1 1683 aa26.16■■□□□ 1.78
PTPN18-207ENST00000462321 CAMTA1Q9Y6Y1 1673 aa26.16■■□□□ 1.78
PTPN18-207ENST00000462321 NEUROD2Q15784 382 aa26.16■■□□□ 1.78
PTPN18-207ENST00000462321 NBPF6Q5VWK0 638 aa26.16■■□□□ 1.78
PTPN18-207ENST00000462321 NBPF4Q96M43 638 aa26.16■■□□□ 1.78
PTPN18-207ENST00000462321 NFE2L2Q16236 605 aa26.14■■□□□ 1.78
PTPN18-207ENST00000462321 WWC1Q8IX03 1113 aa26.14■■□□□ 1.78
PTPN18-207ENST00000462321 RGPD5Q99666 1765 aa26.14■■□□□ 1.77
PTPN18-207ENST00000462321 FAM208AQ9UK61 1670 aaKnown RBP26.12■■□□□ 1.77
PTPN18-207ENST00000462321 RIPK4P57078 832 aa26.11■■□□□ 1.77
PTPN18-207ENST00000462321 GOLGA2Q08379 1002 aa26.11■■□□□ 1.77
PTPN18-207ENST00000462321 USHBP1Q8N6Y0 703 aa26.11■■□□□ 1.77
PTPN18-207ENST00000462321 JCADQ9P266 1359 aa26.1■■□□□ 1.77
PTPN18-207ENST00000462321 COL5A2P05997 1499 aaPredicted RBP26.09■■□□□ 1.77
PTPN18-207ENST00000462321 TRIM35Q9UPQ4 493 aa26.09■■□□□ 1.77
PTPN18-207ENST00000462321 RGPD2P0DJD1 1756 aa26.08■■□□□ 1.77
PTPN18-207ENST00000462321 FAM83GA6ND36 823 aa26.08■■□□□ 1.77
PTPN18-207ENST00000462321 CSB-PGBD3P0DP91 1061 aa26.08■■□□□ 1.77
PTPN18-207ENST00000462321 WDR63Q8IWG1 891 aa26.08■■□□□ 1.77
PTPN18-207ENST00000462321 CDCA7LQ96GN5 454 aa26.08■■□□□ 1.77
PTPN18-207ENST00000462321 COL14A1Q05707 1796 aaKnown RBP26.07■■□□□ 1.76
PTPN18-207ENST00000462321 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
PTPN18-207ENST00000462321 WDR17Q8IZU2 1322 aa26.06■■□□□ 1.76
PTPN18-207ENST00000462321 NLRP2Q9NX02 1062 aa26.05■■□□□ 1.76
PTPN18-207ENST00000462321 E9PSI1 815 aa26.05■■□□□ 1.76
PTPN18-207ENST00000462321 GAS2L2Q8NHY3 880 aa26.05■■□□□ 1.76
PTPN18-207ENST00000462321 SLFN5Q08AF3 891 aa26.04■■□□□ 1.76
PTPN18-207ENST00000462321 MTHFSDQ2M296 383 aaKnown RBP26.02■■□□□ 1.76
PTPN18-207ENST00000462321 PLEKHG2Q9H7P9 1386 aa26.02■■□□□ 1.76
PTPN18-207ENST00000462321 TRMT2AQ8IZ69 625 aaKnown RBP26.01■■□□□ 1.75
PTPN18-207ENST00000462321 IL16Q14005 1332 aa26■■□□□ 1.75
PTPN18-207ENST00000462321 DUSP27Q5VZP5 1158 aa26■■□□□ 1.75
PTPN18-207ENST00000462321 SPINK5Q9NQ38 1064 aaPredicted RBP26■■□□□ 1.75
PTPN18-207ENST00000462321 HSPA1LP34931 641 aa26■■□□□ 1.75
PTPN18-207ENST00000462321 BTG4Q9NY30 223 aa26■■□□□ 1.75
PTPN18-207ENST00000462321 TOM1L2Q6ZVM7 507 aa25.99■■□□□ 1.75
PTPN18-207ENST00000462321 SPATA31A6Q5VVP1 1343 aa25.98■■□□□ 1.75
PTPN18-207ENST00000462321 DLG5Q8TDM6 1919 aa25.98■■□□□ 1.75
PTPN18-207ENST00000462321 NUTM2BA6NNL0 878 aaPredicted RBP25.98■■□□□ 1.75
PTPN18-207ENST00000462321 NUTM2EB1AL46 878 aaPredicted RBP25.98■■□□□ 1.75
PTPN18-207ENST00000462321 ADAMTS2O95450 1211 aa25.98■■□□□ 1.75
PTPN18-207ENST00000462321 EVA1CP58658 441 aa25.98■■□□□ 1.75
PTPN18-207ENST00000462321 CALD1Q05682 793 aaKnown RBP25.98■■□□□ 1.75
PTPN18-207ENST00000462321 AMOTQ4VCS5 1084 aa25.98■■□□□ 1.75
PTPN18-207ENST00000462321 NUTM2AQ8IVF1 878 aaPredicted RBP25.98■■□□□ 1.75
PTPN18-207ENST00000462321 RAPGEF4Q8WZA2 1011 aa25.97■■□□□ 1.75
PTPN18-207ENST00000462321 STRN4Q9NRL3 753 aa25.97■■□□□ 1.75
PTPN18-207ENST00000462321 PLEKHO1Q53GL0 409 aaPredicted RBP25.97■■□□□ 1.75
PTPN18-207ENST00000462321 CARD10Q9BWT7 1032 aa25.97■■□□□ 1.75
PTPN18-207ENST00000462321 CRB1P82279 1406 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms