RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 PIK3C2AO00443 1686 aa28.54■■■□□ 2.16
NR1H3-216ENST00000462051 TTC21BQ7Z4L5 1316 aa28.53■■■□□ 2.16
NR1H3-216ENST00000462051 MARCH10Q8NA82 808 aaPredicted RBP28.52■■■□□ 2.16
NR1H3-216ENST00000462051 KCNH5Q8NCM2 988 aa28.52■■■□□ 2.16
NR1H3-216ENST00000462051 LRRC37A3O60309 1634 aa28.51■■■□□ 2.15
NR1H3-216ENST00000462051 SIN3AQ96ST3 1273 aa28.51■■■□□ 2.15
NR1H3-216ENST00000462051 CDCA7Q9BWT1 371 aaPredicted RBP28.51■■■□□ 2.15
NR1H3-216ENST00000462051 PPP1R1BQ9UD71 204 aaPredicted RBP28.51■■■□□ 2.15
NR1H3-216ENST00000462051 PROM2Q8N271 834 aa28.49■■■□□ 2.15
NR1H3-216ENST00000462051 CPSF1Q10570 1443 aaKnown RBP28.49■■■□□ 2.15
NR1H3-216ENST00000462051 RGPD5Q99666 1765 aa28.49■■■□□ 2.15
NR1H3-216ENST00000462051 SOX12O15370 315 aa28.48■■■□□ 2.15
NR1H3-216ENST00000462051 CARD10Q9BWT7 1032 aa28.48■■■□□ 2.15
NR1H3-216ENST00000462051 RGPD3A6NKT7 1758 aaPredicted RBP28.47■■■□□ 2.15
NR1H3-216ENST00000462051 RGPD4Q7Z3J3 1758 aa28.47■■■□□ 2.15
NR1H3-216ENST00000462051 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
NR1H3-216ENST00000462051 TTC21AQ8NDW8 1320 aa28.47■■■□□ 2.15
NR1H3-216ENST00000462051 CSB-PGBD3P0DP91 1061 aa28.46■■■□□ 2.15
NR1H3-216ENST00000462051 ANO8Q9HCE9 1232 aaPredicted RBP28.46■■■□□ 2.15
NR1H3-216ENST00000462051 BCL9O00512 1426 aa28.45■■■□□ 2.15
NR1H3-216ENST00000462051 AKAP12Q02952 1782 aa28.45■■■□□ 2.15
NR1H3-216ENST00000462051 YY1P25490 414 aa28.45■■■□□ 2.14
NR1H3-216ENST00000462051 WNK3Q9BYP7 1800 aa28.44■■■□□ 2.14
NR1H3-216ENST00000462051 EXOC5O00471 708 aa28.44■■■□□ 2.14
NR1H3-216ENST00000462051 NEUROD1Q13562 356 aa28.44■■■□□ 2.14
NR1H3-216ENST00000462051 ROCK2O75116 1388 aaKnown RBP28.44■■■□□ 2.14
NR1H3-216ENST00000462051 KTN1Q86UP2 1357 aaKnown RBP28.41■■■□□ 2.14
NR1H3-216ENST00000462051 PDGFDQ9GZP0 370 aaPredicted RBP28.41■■■□□ 2.14
NR1H3-216ENST00000462051 NINLQ9Y2I6 1382 aa28.4■■■□□ 2.14
NR1H3-216ENST00000462051 DCAF8L1A6NGE4 600 aa28.4■■■□□ 2.14
NR1H3-216ENST00000462051 TXNRD1Q16881 649 aa28.38■■■□□ 2.13
NR1H3-216ENST00000462051 NFAT5O94916 1531 aa28.37■■■□□ 2.13
NR1H3-216ENST00000462051 CASZ1Q86V15 1759 aa28.37■■■□□ 2.13
NR1H3-216ENST00000462051 CCDC7Q96M83 1385 aa28.36■■■□□ 2.13
NR1H3-216ENST00000462051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.35■■■□□ 2.13
NR1H3-216ENST00000462051 ZBTB7AO95365 584 aa28.34■■■□□ 2.13
NR1H3-216ENST00000462051 STK32BQ9NY57 414 aa28.33■■■□□ 2.13
NR1H3-216ENST00000462051 SLC15A2Q16348 729 aa28.32■■■□□ 2.12
NR1H3-216ENST00000462051 ATF5Q9Y2D1 282 aaPredicted RBP28.32■■■□□ 2.12
NR1H3-216ENST00000462051 USP31Q70CQ4 1352 aa28.32■■■□□ 2.12
NR1H3-216ENST00000462051 PTGER2P43116 358 aa28.31■■■□□ 2.12
NR1H3-216ENST00000462051 NME9Q86XW9 330 aa28.3■■■□□ 2.12
NR1H3-216ENST00000462051 NLRP2Q9NX02 1062 aa28.3■■■□□ 2.12
NR1H3-216ENST00000462051 MON2Q7Z3U7 1717 aa28.29■■■□□ 2.12
NR1H3-216ENST00000462051 ABCC6O95255 1503 aa28.29■■■□□ 2.12
NR1H3-216ENST00000462051 TNS2Q63HR2 1409 aa28.27■■■□□ 2.12
NR1H3-216ENST00000462051 SBNO2Q9Y2G9 1366 aa28.27■■■□□ 2.12
NR1H3-216ENST00000462051 ERBB3P21860 1342 aa28.27■■■□□ 2.12
NR1H3-216ENST00000462051 ACSBG1Q96GR2 724 aa28.27■■■□□ 2.12
NR1H3-216ENST00000462051 TMC1Q8TDI8 760 aa28.26■■■□□ 2.11
NR1H3-216ENST00000462051 SLC12A5Q9H2X9 1139 aa28.26■■■□□ 2.11
NR1H3-216ENST00000462051 CD163L1Q9NR16 1453 aa28.26■■■□□ 2.11
NR1H3-216ENST00000462051 IL2RBP14784 551 aa28.25■■■□□ 2.11
NR1H3-216ENST00000462051 CARD11Q9BXL7 1154 aa28.24■■■□□ 2.11
NR1H3-216ENST00000462051 HDGFL2Q7Z4V5 671 aaPredicted RBP28.23■■■□□ 2.11
NR1H3-216ENST00000462051 ANKRD24Q8TF21 1146 aa28.22■■■□□ 2.11
NR1H3-216ENST00000462051 USP54Q70EL1 1684 aa28.22■■■□□ 2.11
NR1H3-216ENST00000462051 SYT17Q9BSW7 474 aa28.21■■■□□ 2.11
NR1H3-216ENST00000462051 MTFR1LQ9H019 292 aa28.21■■■□□ 2.11
NR1H3-216ENST00000462051 MYOM1P52179 1685 aa28.21■■■□□ 2.11
NR1H3-216ENST00000462051 NHSQ6T4R5 1651 aa28.21■■■□□ 2.11
NR1H3-216ENST00000462051 KAT6BQ8WYB5 2073 aa28.21■■■□□ 2.11
NR1H3-216ENST00000462051 LTN1O94822 1766 aa28.21■■■□□ 2.11
NR1H3-216ENST00000462051 SGIP1Q9BQI5 828 aa28.2■■■□□ 2.1
NR1H3-216ENST00000462051 FHDC1Q9C0D6 1143 aaPredicted RBP28.2■■■□□ 2.1
NR1H3-216ENST00000462051 TERF2IPQ9NYB0 399 aa28.18■■■□□ 2.1
NR1H3-216ENST00000462051 EDC4Q6P2E9 1401 aaKnown RBP28.17■■■□□ 2.1
NR1H3-216ENST00000462051 PUS7Q96PZ0 661 aaKnown RBP28.16■■■□□ 2.1
NR1H3-216ENST00000462051 IP6K1Q92551 441 aa28.14■■■□□ 2.1
NR1H3-216ENST00000462051 LRRC4BQ9NT99 713 aa28.14■■■□□ 2.1
NR1H3-216ENST00000462051 BTAF1O14981 1849 aa28.13■■■□□ 2.09
NR1H3-216ENST00000462051 A0A1W2PP64 1363 aa28.12■■■□□ 2.09
NR1H3-216ENST00000462051 ZNF827Q17R98 1081 aa28.11■■■□□ 2.09
NR1H3-216ENST00000462051 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
NR1H3-216ENST00000462051 ARXQ96QS3 562 aa28.11■■■□□ 2.09
NR1H3-216ENST00000462051 LTV1Q96GA3 475 aaPredicted RBP28.1■■■□□ 2.09
NR1H3-216ENST00000462051 PAPPAQ13219 1627 aa28.1■■■□□ 2.09
NR1H3-216ENST00000462051 ZNF784Q8NCA9 323 aaPredicted RBP28.07■■■□□ 2.08
NR1H3-216ENST00000462051 AKT1S1Q96B36 256 aa28.06■■■□□ 2.08
NR1H3-216ENST00000462051 SLC27A3Q5K4L6 730 aa28.04■■■□□ 2.08
NR1H3-216ENST00000462051 FBLN1P23142 703 aa28.03■■■□□ 2.08
NR1H3-216ENST00000462051 COG3Q96JB2 828 aa28.03■■■□□ 2.08
NR1H3-216ENST00000462051 TESK2Q96S53 571 aa28.03■■■□□ 2.08
NR1H3-216ENST00000462051 TONSLQ96HA7 1378 aa28.02■■■□□ 2.08
NR1H3-216ENST00000462051 PRIM1P49642 420 aaKnown RBP28.02■■■□□ 2.08
NR1H3-216ENST00000462051 SLC16A10Q8TF71 515 aa28.02■■■□□ 2.08
NR1H3-216ENST00000462051 MAP3K19Q56UN5 1328 aa28.01■■■□□ 2.07
NR1H3-216ENST00000462051 CHD4Q14839 1912 aa28.01■■■□□ 2.07
NR1H3-216ENST00000462051 ST20-MTHFSA0A0A6YYL1 179 aa28.01■■■□□ 2.07
NR1H3-216ENST00000462051 HOXC9P31274 260 aa28.01■■■□□ 2.07
NR1H3-216ENST00000462051 MAP3K5Q99683 1374 aa28■■■□□ 2.07
NR1H3-216ENST00000462051 AMPHP49418 695 aa28■■■□□ 2.07
NR1H3-216ENST00000462051 SYTL4Q96C24 671 aaPredicted RBP28■■■□□ 2.07
NR1H3-216ENST00000462051 FAM208AQ9UK61 1670 aaKnown RBP28■■■□□ 2.07
NR1H3-216ENST00000462051 KCNQ4P56696 695 aa27.99■■■□□ 2.07
NR1H3-216ENST00000462051 ZCRB1Q8TBF4 217 aaKnown RBP27.98■■■□□ 2.07
NR1H3-216ENST00000462051 SLC24A1O60721 1099 aa27.97■■■□□ 2.07
NR1H3-216ENST00000462051 TFCP2L1Q9NZI6 479 aa27.97■■■□□ 2.07
NR1H3-216ENST00000462051 PNPLA7Q6ZV29 1317 aa27.96■■■□□ 2.07
NR1H3-216ENST00000462051 ANKRD36BQ8N2N9 1353 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms