RNA–Protein interactions for RNA: ENST00000462047.1

PPP2R1A-204, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-204ENST00000462047 TNS1Q9HBL0 1735 aaKnown RBP23.85■■□□□ 1.41
PPP2R1A-204ENST00000462047 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
PPP2R1A-204ENST00000462047 PUS7Q96PZ0 661 aaKnown RBP23.85■■□□□ 1.41
PPP2R1A-204ENST00000462047 CARD10Q9BWT7 1032 aa23.85■■□□□ 1.41
PPP2R1A-204ENST00000462047 PIK3C2AO00443 1686 aa23.84■■□□□ 1.41
PPP2R1A-204ENST00000462047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
PPP2R1A-204ENST00000462047 LRP5O75197 1615 aa23.84■■□□□ 1.41
PPP2R1A-204ENST00000462047 SLC24A1O60721 1099 aa23.83■■□□□ 1.41
PPP2R1A-204ENST00000462047 OVOS2A0A0G2JMS6 1433 aa23.83■■□□□ 1.4
PPP2R1A-204ENST00000462047 OVOS2A0A0J9YW53 1432 aa23.83■■□□□ 1.4
PPP2R1A-204ENST00000462047 OVOS2Q6IE36 1432 aa23.83■■□□□ 1.4
PPP2R1A-204ENST00000462047 TERF2IPQ9NYB0 399 aa23.82■■□□□ 1.4
PPP2R1A-204ENST00000462047 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
PPP2R1A-204ENST00000462047 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
PPP2R1A-204ENST00000462047 EXOC5O00471 708 aa23.8■■□□□ 1.4
PPP2R1A-204ENST00000462047 PLSCR1O15162 318 aa23.8■■□□□ 1.4
PPP2R1A-204ENST00000462047 BCL11BQ9C0K0 894 aaPredicted RBP23.8■■□□□ 1.4
PPP2R1A-204ENST00000462047 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
PPP2R1A-204ENST00000462047 COL18A1P39060 1754 aa23.79■■□□□ 1.4
PPP2R1A-204ENST00000462047 AKAP12Q02952 1782 aa23.79■■□□□ 1.4
PPP2R1A-204ENST00000462047 NME9Q86XW9 330 aa23.77■■□□□ 1.4
PPP2R1A-204ENST00000462047 MARCH10Q8NA82 808 aaPredicted RBP23.77■■□□□ 1.4
PPP2R1A-204ENST00000462047 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
PPP2R1A-204ENST00000462047 BCL9O00512 1426 aa23.74■■□□□ 1.39
PPP2R1A-204ENST00000462047 NLRP2Q9NX02 1062 aa23.73■■□□□ 1.39
PPP2R1A-204ENST00000462047 EDC4Q6P2E9 1401 aaKnown RBP23.73■■□□□ 1.39
PPP2R1A-204ENST00000462047 NFAT5O94916 1531 aa23.73■■□□□ 1.39
PPP2R1A-204ENST00000462047 TRIM26Q12899 539 aaPredicted RBP23.72■■□□□ 1.39
PPP2R1A-204ENST00000462047 CD163L1Q9NR16 1453 aa23.72■■□□□ 1.39
PPP2R1A-204ENST00000462047 ABCC6O95255 1503 aa23.72■■□□□ 1.39
PPP2R1A-204ENST00000462047 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
PPP2R1A-204ENST00000462047 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
PPP2R1A-204ENST00000462047 MON2Q7Z3U7 1717 aa23.7■■□□□ 1.38
PPP2R1A-204ENST00000462047 ERBB3P21860 1342 aa23.69■■□□□ 1.38
PPP2R1A-204ENST00000462047 TESK2Q96S53 571 aa23.69■■□□□ 1.38
PPP2R1A-204ENST00000462047 PEAK1Q9H792 1746 aa23.69■■□□□ 1.38
PPP2R1A-204ENST00000462047 LRRC37A3O60309 1634 aa23.69■■□□□ 1.38
PPP2R1A-204ENST00000462047 RREB1Q92766 1687 aa23.68■■□□□ 1.38
PPP2R1A-204ENST00000462047 SPON1Q9HCB6 807 aa23.68■■□□□ 1.38
PPP2R1A-204ENST00000462047 A0A1W2PP64 1363 aa23.67■■□□□ 1.38
PPP2R1A-204ENST00000462047 IL2RBP14784 551 aa23.67■■□□□ 1.38
PPP2R1A-204ENST00000462047 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
PPP2R1A-204ENST00000462047 ANKRD24Q8TF21 1146 aa23.67■■□□□ 1.38
PPP2R1A-204ENST00000462047 KCNQ2O43526 872 aa23.66■■□□□ 1.38
PPP2R1A-204ENST00000462047 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
PPP2R1A-204ENST00000462047 IP6K1Q92551 441 aa23.65■■□□□ 1.38
PPP2R1A-204ENST00000462047 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.38
PPP2R1A-204ENST00000462047 PROM2Q8N271 834 aa23.64■■□□□ 1.37
PPP2R1A-204ENST00000462047 COG3Q96JB2 828 aa23.64■■□□□ 1.37
PPP2R1A-204ENST00000462047 PPP1R1BQ9UD71 204 aaPredicted RBP23.64■■□□□ 1.37
PPP2R1A-204ENST00000462047 TXNRD1Q16881 649 aa23.62■■□□□ 1.37
PPP2R1A-204ENST00000462047 SBF2Q86WG5 1849 aa23.61■■□□□ 1.37
PPP2R1A-204ENST00000462047 USP54Q70EL1 1684 aa23.61■■□□□ 1.37
PPP2R1A-204ENST00000462047 TNS2Q63HR2 1409 aa23.61■■□□□ 1.37
PPP2R1A-204ENST00000462047 TMF1P82094 1093 aa23.61■■□□□ 1.37
PPP2R1A-204ENST00000462047 STK32BQ9NY57 414 aa23.6■■□□□ 1.37
PPP2R1A-204ENST00000462047 RGPD3A6NKT7 1758 aaPredicted RBP23.6■■□□□ 1.37
PPP2R1A-204ENST00000462047 RGPD4Q7Z3J3 1758 aa23.6■■□□□ 1.37
PPP2R1A-204ENST00000462047 WNK3Q9BYP7 1800 aa23.59■■□□□ 1.37
PPP2R1A-204ENST00000462047 CDCA8Q53HL2 280 aa23.58■■□□□ 1.37
PPP2R1A-204ENST00000462047 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.37
PPP2R1A-204ENST00000462047 DCAF8L1A6NGE4 600 aa23.57■■□□□ 1.36
PPP2R1A-204ENST00000462047 AMPHP49418 695 aa23.57■■□□□ 1.36
PPP2R1A-204ENST00000462047 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
PPP2R1A-204ENST00000462047 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
PPP2R1A-204ENST00000462047 ANKRD36BQ8N2N9 1353 aa23.55■■□□□ 1.36
PPP2R1A-204ENST00000462047 SLC15A2Q16348 729 aa23.55■■□□□ 1.36
PPP2R1A-204ENST00000462047 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
PPP2R1A-204ENST00000462047 LTN1O94822 1766 aa23.54■■□□□ 1.36
PPP2R1A-204ENST00000462047 MAP3K19Q56UN5 1328 aa23.54■■□□□ 1.36
PPP2R1A-204ENST00000462047 HOXC9P31274 260 aa23.53■■□□□ 1.36
PPP2R1A-204ENST00000462047 USP47Q96K76 1375 aa23.52■■□□□ 1.36
PPP2R1A-204ENST00000462047 DDX54Q8TDD1 881 aaKnown RBP23.52■■□□□ 1.36
PPP2R1A-204ENST00000462047 FYB1O15117 783 aa23.51■■□□□ 1.35
PPP2R1A-204ENST00000462047 ZBTB7AO95365 584 aa23.49■■□□□ 1.35
PPP2R1A-204ENST00000462047 FBLN1P23142 703 aa23.48■■□□□ 1.35
PPP2R1A-204ENST00000462047 PDGFDQ9GZP0 370 aaPredicted RBP23.48■■□□□ 1.35
PPP2R1A-204ENST00000462047 GGNBP2Q9H3C7 697 aa23.48■■□□□ 1.35
PPP2R1A-204ENST00000462047 RTL1A6NKG5 1358 aa23.46■■□□□ 1.35
PPP2R1A-204ENST00000462047 ZCRB1Q8TBF4 217 aaKnown RBP23.46■■□□□ 1.35
PPP2R1A-204ENST00000462047 KAT6BQ8WYB5 2073 aa23.46■■□□□ 1.35
PPP2R1A-204ENST00000462047 ATF5Q9Y2D1 282 aaPredicted RBP23.46■■□□□ 1.35
PPP2R1A-204ENST00000462047 MTFR1LQ9H019 292 aa23.45■■□□□ 1.34
PPP2R1A-204ENST00000462047 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
PPP2R1A-204ENST00000462047 RRS1Q15050 365 aaKnown RBP23.44■■□□□ 1.34
PPP2R1A-204ENST00000462047 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
PPP2R1A-204ENST00000462047 CGNL1Q0VF96 1302 aa23.43■■□□□ 1.34
PPP2R1A-204ENST00000462047 PTGER2P43116 358 aa23.43■■□□□ 1.34
PPP2R1A-204ENST00000462047 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
PPP2R1A-204ENST00000462047 SYTL4Q96C24 671 aaPredicted RBP23.42■■□□□ 1.34
PPP2R1A-204ENST00000462047 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
PPP2R1A-204ENST00000462047 PRIM1P49642 420 aaKnown RBP23.41■■□□□ 1.34
PPP2R1A-204ENST00000462047 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
PPP2R1A-204ENST00000462047 RAPGEF4Q8WZA2 1011 aa23.41■■□□□ 1.34
PPP2R1A-204ENST00000462047 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
PPP2R1A-204ENST00000462047 SMG6Q86US8 1419 aaKnown RBP23.41■■□□□ 1.34
PPP2R1A-204ENST00000462047 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
PPP2R1A-204ENST00000462047 YY1P25490 414 aa23.4■■□□□ 1.34
PPP2R1A-204ENST00000462047 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
PPP2R1A-204ENST00000462047 KIF24Q5T7B8 1368 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms