RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 ICE2Q659A1 982 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 CNPY4Q8N129 248 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
LINC01140-201ENST00000461990 CEP120Q8N960 986 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 ZNF397Q8NF99 534 aaPredicted RBP11.17□□□□□ -0.62
LINC01140-201ENST00000461990 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
LINC01140-201ENST00000461990 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 MAGI2Q86UL8 1455 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 ASXL1Q8IXJ9 1541 aa11.17□□□□□ -0.62
LINC01140-201ENST00000461990 CARD10Q9BWT7 1032 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 RSPH14Q9UHP6 348 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 PTPRGP23470 1445 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 ANKRD50Q9ULJ7 1429 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 LOC102724159A0A0B4J2E5 919 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 PWP2Q15269 919 aaKnown RBP11.16□□□□□ -0.62
LINC01140-201ENST00000461990 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 RNF17Q9BXT8 1623 aaKnown RBP11.16□□□□□ -0.62
LINC01140-201ENST00000461990 CCDC141Q6ZP82 1450 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 GTF2A1P52655 376 aaPredicted RBP11.16□□□□□ -0.62
LINC01140-201ENST00000461990 FBLN2P98095 1184 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 RABEP1Q15276 862 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 SMC4Q9NTJ3 1288 aa11.16□□□□□ -0.62
LINC01140-201ENST00000461990 APAF1O14727 1248 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
LINC01140-201ENST00000461990 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
LINC01140-201ENST00000461990 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 DMRT2Q9Y5R5 561 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 ADCY5O95622 1261 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 GUCY2CP25092 1073 aa11.15□□□□□ -0.62
LINC01140-201ENST00000461990 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.62
LINC01140-201ENST00000461990 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
LINC01140-201ENST00000461990 ERICH4A6NGS2 130 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
LINC01140-201ENST00000461990 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 CHMP4CQ96CF2 233 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 SLC26A8Q96RN1 970 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 NUCB1Q02818 461 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 IQSEC2Q5JU85 1478 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 PKD2Q13563 968 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 ZBTB9Q96C00 473 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
LINC01140-201ENST00000461990 LMOD3Q0VAK6 560 aa11.13□□□□□ -0.63
LINC01140-201ENST00000461990 MYOM1P52179 1685 aa11.13□□□□□ -0.63
LINC01140-201ENST00000461990 ATP10AO60312 1499 aa11.13□□□□□ -0.63
LINC01140-201ENST00000461990 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
LINC01140-201ENST00000461990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
LINC01140-201ENST00000461990 CASQ1P31415 396 aa11.12□□□□□ -0.63
LINC01140-201ENST00000461990 PYCARDQ9ULZ3 195 aa11.12□□□□□ -0.63
LINC01140-201ENST00000461990 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
LINC01140-201ENST00000461990 PKP1Q13835 747 aa11.12□□□□□ -0.63
LINC01140-201ENST00000461990 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
LINC01140-201ENST00000461990 NOL10Q9BSC4 688 aaKnown RBP11.12□□□□□ -0.63
LINC01140-201ENST00000461990 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
LINC01140-201ENST00000461990 KDM4AO75164 1064 aa11.12□□□□□ -0.63
LINC01140-201ENST00000461990 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
LINC01140-201ENST00000461990 SHPRHQ149N8 1683 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 TXLNBQ8N3L3 684 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 TNNQ9UQP3 1299 aa11.11□□□□□ -0.63
LINC01140-201ENST00000461990 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
LINC01140-201ENST00000461990 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
LINC01140-201ENST00000461990 TMF1P82094 1093 aa11.1□□□□□ -0.63
LINC01140-201ENST00000461990 POLKQ9UBT6 870 aa11.1□□□□□ -0.63
LINC01140-201ENST00000461990 GOLGA6L6A8MZA4 724 aa11.1□□□□□ -0.63
LINC01140-201ENST00000461990 CT47A1Q5JQC4 288 aaPredicted RBP11.1□□□□□ -0.63
LINC01140-201ENST00000461990 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
LINC01140-201ENST00000461990 PRR29P0C7W0 189 aa11.09□□□□□ -0.63
LINC01140-201ENST00000461990 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
LINC01140-201ENST00000461990 BANK1Q8NDB2 785 aa11.09□□□□□ -0.63
LINC01140-201ENST00000461990 PPRC1Q5VV67 1664 aaKnown RBP11.09□□□□□ -0.63
LINC01140-201ENST00000461990 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
LINC01140-201ENST00000461990 WDR63Q8IWG1 891 aa11.09□□□□□ -0.63
LINC01140-201ENST00000461990 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 MLECQ14165 292 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 CCDC112Q8NEF3 446 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 MYO1CO00159 1063 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
LINC01140-201ENST00000461990 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
LINC01140-201ENST00000461990 ZKSCAN2Q63HK3 967 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
LINC01140-201ENST00000461990 DDX19BQ9UMR2 479 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 KNSTRNQ9Y448 316 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 ADCY10Q96PN6 1610 aa11.08□□□□□ -0.64
LINC01140-201ENST00000461990 KIF1CO43896 1103 aaKnown RBP11.07□□□□□ -0.64
LINC01140-201ENST00000461990 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
LINC01140-201ENST00000461990 EGFL6Q8IUX8 553 aa11.07□□□□□ -0.64
LINC01140-201ENST00000461990 DONSONQ9NYP3 566 aa11.07□□□□□ -0.64
LINC01140-201ENST00000461990 PPP6R1Q9UPN7 881 aa11.07□□□□□ -0.64
LINC01140-201ENST00000461990 TRERF1Q96PN7 1200 aa11.07□□□□□ -0.64
LINC01140-201ENST00000461990 PTPRCP08575 1304 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms