RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 THSD7AQ9UPZ6 1657 aa14.11□□□□□ -0.15
SPTAN1-204ENST00000461855 FAM98CQ17RN3 349 aaKnown RBP14.11□□□□□ -0.15
SPTAN1-204ENST00000461855 COG3Q96JB2 828 aa14.11□□□□□ -0.15
SPTAN1-204ENST00000461855 WDR17Q8IZU2 1322 aa14.11□□□□□ -0.15
SPTAN1-204ENST00000461855 CRB1P82279 1406 aa14.1□□□□□ -0.15
SPTAN1-204ENST00000461855 EP400Q96L91 3159 aa14.1□□□□□ -0.15
SPTAN1-204ENST00000461855 NSD3Q9BZ95 1437 aa14.09□□□□□ -0.15
SPTAN1-204ENST00000461855 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
SPTAN1-204ENST00000461855 SOX12O15370 315 aa14.08□□□□□ -0.16
SPTAN1-204ENST00000461855 KRT27Q7Z3Y8 459 aa14.08□□□□□ -0.16
SPTAN1-204ENST00000461855 IP6K1Q92551 441 aa14.08□□□□□ -0.16
SPTAN1-204ENST00000461855 GGNBP2Q9H3C7 697 aa14.08□□□□□ -0.16
SPTAN1-204ENST00000461855 BRWD3Q6RI45 1802 aa14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 CCDC125Q86Z20 511 aa14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 CARD10Q9BWT7 1032 aa14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 ERBB3P21860 1342 aa14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
SPTAN1-204ENST00000461855 PANK3Q9H999 370 aa14.06□□□□□ -0.16
SPTAN1-204ENST00000461855 ZBTB7CA1YPR0 619 aa14.05□□□□□ -0.16
SPTAN1-204ENST00000461855 FBLN1P23142 703 aa14.05□□□□□ -0.16
SPTAN1-204ENST00000461855 TOM1L2Q6ZVM7 507 aa14.05□□□□□ -0.16
SPTAN1-204ENST00000461855 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
SPTAN1-204ENST00000461855 HOXC9P31274 260 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 USP35Q9P2H5 1018 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 KIF24Q5T7B8 1368 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 LTN1O94822 1766 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 RGPD5Q99666 1765 aa14.04□□□□□ -0.16
SPTAN1-204ENST00000461855 CDCA7Q9BWT1 371 aaPredicted RBP14.03□□□□□ -0.16
SPTAN1-204ENST00000461855 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
SPTAN1-204ENST00000461855 KIF20BQ96Q89 1820 aa14.02□□□□□ -0.16
SPTAN1-204ENST00000461855 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
SPTAN1-204ENST00000461855 ANKRD24Q8TF21 1146 aa14.02□□□□□ -0.17
SPTAN1-204ENST00000461855 POLR3GLQ9BT43 218 aa14.02□□□□□ -0.17
SPTAN1-204ENST00000461855 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
SPTAN1-204ENST00000461855 NSD2O96028 1365 aa14.01□□□□□ -0.17
SPTAN1-204ENST00000461855 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
SPTAN1-204ENST00000461855 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
SPTAN1-204ENST00000461855 A0A0G2JS52 829 aa14□□□□□ -0.17
SPTAN1-204ENST00000461855 CSB-PGBD3P0DP91 1061 aa14□□□□□ -0.17
SPTAN1-204ENST00000461855 AMPHP49418 695 aa14□□□□□ -0.17
SPTAN1-204ENST00000461855 MYT1Q01538 1121 aa14□□□□□ -0.17
SPTAN1-204ENST00000461855 INSRP06213 1382 aa13.99□□□□□ -0.17
SPTAN1-204ENST00000461855 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
SPTAN1-204ENST00000461855 FAM196AQ6ZSG2 479 aa13.99□□□□□ -0.17
SPTAN1-204ENST00000461855 BCL9O00512 1426 aa13.98□□□□□ -0.17
SPTAN1-204ENST00000461855 PDE3BQ13370 1112 aa13.98□□□□□ -0.17
SPTAN1-204ENST00000461855 POLKQ9UBT6 870 aa13.98□□□□□ -0.17
SPTAN1-204ENST00000461855 FLT4P35916 1363 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 DDB1Q16531 1140 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 WNK3Q9BYP7 1800 aa13.97□□□□□ -0.17
SPTAN1-204ENST00000461855 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
SPTAN1-204ENST00000461855 EMILIN1Q9Y6C2 1016 aa13.96□□□□□ -0.17
SPTAN1-204ENST00000461855 LRRC37A3O60309 1634 aa13.96□□□□□ -0.17
SPTAN1-204ENST00000461855 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.18
SPTAN1-204ENST00000461855 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 FAM208AQ9UK61 1670 aaKnown RBP13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 IL2RBP14784 551 aa13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 SMG6Q86US8 1419 aaKnown RBP13.95□□□□□ -0.18
SPTAN1-204ENST00000461855 EXOC5O00471 708 aa13.94□□□□□ -0.18
SPTAN1-204ENST00000461855 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
SPTAN1-204ENST00000461855 OVOS2A0A0G2JMS6 1433 aa13.93□□□□□ -0.18
SPTAN1-204ENST00000461855 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
SPTAN1-204ENST00000461855 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
SPTAN1-204ENST00000461855 DEFB132Q7Z7B7 95 aa13.92□□□□□ -0.18
SPTAN1-204ENST00000461855 TRIM37O94972 964 aa13.91□□□□□ -0.18
SPTAN1-204ENST00000461855 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
SPTAN1-204ENST00000461855 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
SPTAN1-204ENST00000461855 MAP2P11137 1827 aaKnown RBP13.91□□□□□ -0.18
SPTAN1-204ENST00000461855 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
SPTAN1-204ENST00000461855 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-204ENST00000461855 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
SPTAN1-204ENST00000461855 BAG6P46379 1132 aa13.89□□□□□ -0.19
SPTAN1-204ENST00000461855 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
SPTAN1-204ENST00000461855 MEGF6O75095 1541 aa13.89□□□□□ -0.19
SPTAN1-204ENST00000461855 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-204ENST00000461855 EYA1Q99502 592 aa13.88□□□□□ -0.19
SPTAN1-204ENST00000461855 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-204ENST00000461855 PARD3Q8TEW0 1356 aa13.87□□□□□ -0.19
SPTAN1-204ENST00000461855 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
SPTAN1-204ENST00000461855 EN1Q05925 392 aaPredicted RBP13.87□□□□□ -0.19
SPTAN1-204ENST00000461855 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
SPTAN1-204ENST00000461855 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
SPTAN1-204ENST00000461855 SBF2Q86WG5 1849 aa13.86□□□□□ -0.19
SPTAN1-204ENST00000461855 PLSCR1O15162 318 aa13.86□□□□□ -0.19
SPTAN1-204ENST00000461855 USHBP1Q8N6Y0 703 aa13.86□□□□□ -0.19
SPTAN1-204ENST00000461855 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
SPTAN1-204ENST00000461855 APBA3O96018 575 aa13.85□□□□□ -0.19
SPTAN1-204ENST00000461855 PTF1AQ7RTS3 328 aa13.85□□□□□ -0.19
SPTAN1-204ENST00000461855 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms