RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
CFHR3-204ENST00000461558 CCDC116Q8IYX3 515 aa10.92□□□□□ -0.66
CFHR3-204ENST00000461558 TMEM151AQ8N4L1 468 aa10.92□□□□□ -0.66
CFHR3-204ENST00000461558 EMILIN1Q9Y6C2 1016 aa10.92□□□□□ -0.66
CFHR3-204ENST00000461558 KRT76Q01546 638 aa10.91□□□□□ -0.66
CFHR3-204ENST00000461558 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
CFHR3-204ENST00000461558 CNTNAP3BQ96NU0 1288 aa10.91□□□□□ -0.66
CFHR3-204ENST00000461558 CNTNAP3Q9BZ76 1288 aa10.91□□□□□ -0.66
CFHR3-204ENST00000461558 TTLL8A6PVC2 850 aa10.9□□□□□ -0.66
CFHR3-204ENST00000461558 GPR161Q8N6U8 529 aaKnown RBP10.9□□□□□ -0.66
CFHR3-204ENST00000461558 GDF11O95390 407 aa10.89□□□□□ -0.67
CFHR3-204ENST00000461558 RASSF7Q02833 373 aa10.89□□□□□ -0.67
CFHR3-204ENST00000461558 PTSQ03393 145 aa10.88□□□□□ -0.67
CFHR3-204ENST00000461558 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
CFHR3-204ENST00000461558 PDXDC2PQ6P474 469 aa10.87□□□□□ -0.67
CFHR3-204ENST00000461558 LRRN4Q8WUT4 740 aa10.87□□□□□ -0.67
CFHR3-204ENST00000461558 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
CFHR3-204ENST00000461558 ARHGAP9Q9BRR9 750 aa10.86□□□□□ -0.67
CFHR3-204ENST00000461558 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
CFHR3-204ENST00000461558 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
CFHR3-204ENST00000461558 PPP1R26Q5T8A7 1209 aaPredicted RBP10.85□□□□□ -0.67
CFHR3-204ENST00000461558 FBXO31Q5XUX0 539 aaPredicted RBP10.85□□□□□ -0.67
CFHR3-204ENST00000461558 FIGNL2A6NMB9 653 aa10.84□□□□□ -0.67
CFHR3-204ENST00000461558 SH3D19Q5HYK7 790 aa10.84□□□□□ -0.67
CFHR3-204ENST00000461558 NANOS1Q8WY41 292 aaKnown RBP10.84□□□□□ -0.67
CFHR3-204ENST00000461558 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
CFHR3-204ENST00000461558 PGPEP1Q9NXJ5 209 aa10.84□□□□□ -0.67
CFHR3-204ENST00000461558 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
CFHR3-204ENST00000461558 SVOPQ8N4V2 548 aa10.83□□□□□ -0.68
CFHR3-204ENST00000461558 CCDC155Q8N6L0 562 aa10.83□□□□□ -0.68
CFHR3-204ENST00000461558 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
CFHR3-204ENST00000461558 CDV3Q9UKY7 258 aaKnown RBP10.83□□□□□ -0.68
CFHR3-204ENST00000461558 CBLBQ13191 982 aa10.82□□□□□ -0.68
CFHR3-204ENST00000461558 NR6A1Q15406 480 aa10.82□□□□□ -0.68
CFHR3-204ENST00000461558 ZNF385CQ66K41 422 aaPredicted RBP10.82□□□□□ -0.68
CFHR3-204ENST00000461558 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
CFHR3-204ENST00000461558 Q6ZVU0 165 aa10.82□□□□□ -0.68
CFHR3-204ENST00000461558 PROCA1Q8NCQ7 364 aaPredicted RBP10.82□□□□□ -0.68
CFHR3-204ENST00000461558 KCTD15Q96SI1 283 aaPredicted RBP10.82□□□□□ -0.68
CFHR3-204ENST00000461558 GPBP1L1Q9HC44 474 aaPredicted RBP10.82□□□□□ -0.68
CFHR3-204ENST00000461558 SPINT1O43278 529 aa10.81□□□□□ -0.68
CFHR3-204ENST00000461558 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
CFHR3-204ENST00000461558 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
CFHR3-204ENST00000461558 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
CFHR3-204ENST00000461558 DHX9Q08211 1270 aaKnown RBP10.79□□□□□ -0.68
CFHR3-204ENST00000461558 RNFT1Q5M7Z0 435 aa10.79□□□□□ -0.68
CFHR3-204ENST00000461558 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
CFHR3-204ENST00000461558 FAM117AQ9C073 453 aa10.79□□□□□ -0.68
CFHR3-204ENST00000461558 SLC35F4A4IF30 521 aa10.78□□□□□ -0.68
CFHR3-204ENST00000461558 PTK2Q05397 1052 aa10.78□□□□□ -0.68
CFHR3-204ENST00000461558 INTS6LQ5JSJ4 861 aaKnown RBP10.78□□□□□ -0.68
CFHR3-204ENST00000461558 CDC14CA4D256 554 aa10.77□□□□□ -0.69
CFHR3-204ENST00000461558 AP1G2O75843 785 aa10.77□□□□□ -0.69
CFHR3-204ENST00000461558 ITGA6P23229 1130 aa10.77□□□□□ -0.69
CFHR3-204ENST00000461558 ATP1B4Q9UN42 357 aaPredicted RBP10.77□□□□□ -0.69
CFHR3-204ENST00000461558 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.69
CFHR3-204ENST00000461558 SLURP2P0DP57 97 aa10.76□□□□□ -0.69
CFHR3-204ENST00000461558 ADAM32Q8TC27 787 aa10.76□□□□□ -0.69
CFHR3-204ENST00000461558 SV2AQ7L0J3 742 aa10.75□□□□□ -0.69
CFHR3-204ENST00000461558 VWA5B2Q8N398 1253 aa10.75□□□□□ -0.69
CFHR3-204ENST00000461558 DNMT3AQ9Y6K1 912 aaPredicted RBP10.75□□□□□ -0.69
CFHR3-204ENST00000461558 IRS1P35568 1242 aa10.74□□□□□ -0.69
CFHR3-204ENST00000461558 WHAMMQ8TF30 809 aa10.74□□□□□ -0.69
CFHR3-204ENST00000461558 MARSP56192 900 aaKnown RBP10.73□□□□□ -0.69
CFHR3-204ENST00000461558 NBPF20Q3BBV1 942 aa10.73□□□□□ -0.69
CFHR3-204ENST00000461558 GPAT2Q6NUI2 795 aa10.73□□□□□ -0.69
CFHR3-204ENST00000461558 EPS8L1Q8TE68 723 aa10.73□□□□□ -0.69
CFHR3-204ENST00000461558 AGBL1Q96MI9 1066 aa10.73□□□□□ -0.69
CFHR3-204ENST00000461558 ARHGEF15O94989 841 aa10.72□□□□□ -0.69
CFHR3-204ENST00000461558 IGHA1P01876 353 aa10.72□□□□□ -0.69
CFHR3-204ENST00000461558 USP17L8P0C7I0 530 aa10.72□□□□□ -0.69
CFHR3-204ENST00000461558 CTSOP43234 321 aaPredicted RBP10.72□□□□□ -0.69
CFHR3-204ENST00000461558 KANK3Q6NY19 840 aa10.72□□□□□ -0.69
CFHR3-204ENST00000461558 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
CFHR3-204ENST00000461558 HMX1Q9NP08 348 aaPredicted RBP10.72□□□□□ -0.69
CFHR3-204ENST00000461558 RELBQ01201 579 aa10.71□□□□□ -0.69
CFHR3-204ENST00000461558 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
CFHR3-204ENST00000461558 POLMQ9NP87 494 aaPredicted RBP10.71□□□□□ -0.69
CFHR3-204ENST00000461558 FOXK2Q01167 660 aa10.69□□□□□ -0.7
CFHR3-204ENST00000461558 SCARF2Q96GP6 870 aaPredicted RBP10.69□□□□□ -0.7
CFHR3-204ENST00000461558 TMPRSS4Q9NRS4 437 aa10.69□□□□□ -0.7
CFHR3-204ENST00000461558 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
CFHR3-204ENST00000461558 RNF217Q8TC41 542 aa10.68□□□□□ -0.7
CFHR3-204ENST00000461558 RAB15P59190 212 aa10.67□□□□□ -0.7
CFHR3-204ENST00000461558 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
CFHR3-204ENST00000461558 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
CFHR3-204ENST00000461558 ADH1AP07327 375 aa10.66□□□□□ -0.7
CFHR3-204ENST00000461558 RFC5P40937 340 aa10.66□□□□□ -0.7
CFHR3-204ENST00000461558 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
CFHR3-204ENST00000461558 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
CFHR3-204ENST00000461558 SENP3-EIF4A1A0A087X0R7 540 aa10.65□□□□□ -0.7
CFHR3-204ENST00000461558 ERVH48-1M5A8F1 160 aa10.65□□□□□ -0.7
CFHR3-204ENST00000461558 ESPNB1AK53 854 aa10.64□□□□□ -0.71
CFHR3-204ENST00000461558 LILRA1O75019 489 aa10.64□□□□□ -0.71
CFHR3-204ENST00000461558 SRSF11Q05519 484 aaKnown RBP10.64□□□□□ -0.71
CFHR3-204ENST00000461558 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
CFHR3-204ENST00000461558 LYPD4Q6UWN0 246 aa10.63□□□□□ -0.71
CFHR3-204ENST00000461558 PTGIRP43119 386 aa10.62□□□□□ -0.71
CFHR3-204ENST00000461558 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
CFHR3-204ENST00000461558 KDF1Q8NAX2 398 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms