RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 TERF2IPQ9NYB0 399 aa33.17■■■□□ 2.9
LMBR1-214ENST00000461469 TNS1Q9HBL0 1735 aaKnown RBP33.16■■■□□ 2.9
LMBR1-214ENST00000461469 PARP4Q9UKK3 1724 aaKnown RBP33.16■■■□□ 2.9
LMBR1-214ENST00000461469 LTN1O94822 1766 aa33.16■■■□□ 2.9
LMBR1-214ENST00000461469 WNK3Q9BYP7 1800 aa33.15■■■□□ 2.9
LMBR1-214ENST00000461469 RGPD1P0DJD0 1748 aa33.14■■■□□ 2.9
LMBR1-214ENST00000461469 OVOS2A0A0J9YW53 1432 aa33.14■■■□□ 2.9
LMBR1-214ENST00000461469 OVOS2Q6IE36 1432 aa33.14■■■□□ 2.9
LMBR1-214ENST00000461469 NINLQ9Y2I6 1382 aa33.14■■■□□ 2.9
LMBR1-214ENST00000461469 CCER1Q8TC90 406 aaPredicted RBP33.11■■■□□ 2.89
LMBR1-214ENST00000461469 THRAP3Q9Y2W1 955 aaKnown RBP33.11■■■□□ 2.89
LMBR1-214ENST00000461469 LRRC37A3O60309 1634 aa33.1■■■□□ 2.89
LMBR1-214ENST00000461469 WDR17Q8IZU2 1322 aa33.1■■■□□ 2.89
LMBR1-214ENST00000461469 TMF1P82094 1093 aa33.1■■■□□ 2.89
LMBR1-214ENST00000461469 MYOM1P52179 1685 aa33.09■■■□□ 2.89
LMBR1-214ENST00000461469 ABCC6O95255 1503 aa33.08■■■□□ 2.89
LMBR1-214ENST00000461469 SLC24A1O60721 1099 aa33.08■■■□□ 2.89
LMBR1-214ENST00000461469 SF3B2Q13435 895 aaKnown RBP33.08■■■□□ 2.89
LMBR1-214ENST00000461469 TOM1L2Q6ZVM7 507 aa33.08■■■□□ 2.89
LMBR1-214ENST00000461469 ANKRD36BQ8N2N9 1353 aa33.08■■■□□ 2.89
LMBR1-214ENST00000461469 PEAK1Q9H792 1746 aa33.04■■■□□ 2.88
LMBR1-214ENST00000461469 PDE3BQ13370 1112 aa33.02■■■□□ 2.88
LMBR1-214ENST00000461469 FAM196AQ6ZSG2 479 aa33.02■■■□□ 2.88
LMBR1-214ENST00000461469 TRIM37O94972 964 aa33.01■■■□□ 2.87
LMBR1-214ENST00000461469 FBLN1P23142 703 aa33■■■□□ 2.87
LMBR1-214ENST00000461469 EN1Q05925 392 aaPredicted RBP33■■■□□ 2.87
LMBR1-214ENST00000461469 DISP2A7MBM2 1401 aa33■■■□□ 2.87
LMBR1-214ENST00000461469 CSB-PGBD3P0DP91 1061 aa32.99■■■□□ 2.87
LMBR1-214ENST00000461469 CARD10Q9BWT7 1032 aa32.99■■■□□ 2.87
LMBR1-214ENST00000461469 BAG6P46379 1132 aa32.98■■■□□ 2.87
LMBR1-214ENST00000461469 ERBB3P21860 1342 aa32.97■■■□□ 2.87
LMBR1-214ENST00000461469 SBF2Q86WG5 1849 aa32.95■■■□□ 2.87
LMBR1-214ENST00000461469 KIF20BQ96Q89 1820 aa32.95■■■□□ 2.86
LMBR1-214ENST00000461469 FYB1O15117 783 aa32.93■■■□□ 2.86
LMBR1-214ENST00000461469 COG3Q96JB2 828 aa32.93■■■□□ 2.86
LMBR1-214ENST00000461469 DDB1Q16531 1140 aa32.92■■■□□ 2.86
LMBR1-214ENST00000461469 CDCA8Q53HL2 280 aa32.92■■■□□ 2.86
LMBR1-214ENST00000461469 CARD14Q9BXL6 1004 aa32.92■■■□□ 2.86
LMBR1-214ENST00000461469 GGNBP2Q9H3C7 697 aa32.92■■■□□ 2.86
LMBR1-214ENST00000461469 EZH2Q15910 746 aaKnown RBP32.91■■■□□ 2.86
LMBR1-214ENST00000461469 ANKRD24Q8TF21 1146 aa32.91■■■□□ 2.86
LMBR1-214ENST00000461469 MAP3K19Q56UN5 1328 aa32.9■■■□□ 2.86
LMBR1-214ENST00000461469 CCDC7Q96M83 1385 aa32.9■■■□□ 2.86
LMBR1-214ENST00000461469 OVOS2A0A0G2JMS6 1433 aa32.89■■■□□ 2.86
LMBR1-214ENST00000461469 MARCH10Q8NA82 808 aaPredicted RBP32.89■■■□□ 2.86
LMBR1-214ENST00000461469 CAMKK2Q96RR4 588 aa32.89■■■□□ 2.86
LMBR1-214ENST00000461469 HSPA5P11021 654 aaKnown RBP32.88■■■□□ 2.85
LMBR1-214ENST00000461469 IP6K1Q92551 441 aa32.88■■■□□ 2.85
LMBR1-214ENST00000461469 RGPD2P0DJD1 1756 aa32.88■■■□□ 2.85
LMBR1-214ENST00000461469 APBA3O96018 575 aa32.87■■■□□ 2.85
LMBR1-214ENST00000461469 NLRP2Q9NX02 1062 aa32.87■■■□□ 2.85
LMBR1-214ENST00000461469 RREB1Q92766 1687 aa32.86■■■□□ 2.85
LMBR1-214ENST00000461469 PTF1AQ7RTS3 328 aa32.86■■■□□ 2.85
LMBR1-214ENST00000461469 CDCA7Q9BWT1 371 aaPredicted RBP32.85■■■□□ 2.85
LMBR1-214ENST00000461469 NSD3Q9BZ95 1437 aa32.85■■■□□ 2.85
LMBR1-214ENST00000461469 SRCAPQ6ZRS2 3230 aa32.84■■■□□ 2.85
LMBR1-214ENST00000461469 HOXC9P31274 260 aa32.83■■■□□ 2.85
LMBR1-214ENST00000461469 RRS1Q15050 365 aaKnown RBP32.83■■■□□ 2.85
LMBR1-214ENST00000461469 TNS2Q63HR2 1409 aa32.83■■■□□ 2.85
LMBR1-214ENST00000461469 FAM208AQ9UK61 1670 aaKnown RBP32.82■■■□□ 2.84
LMBR1-214ENST00000461469 EIF4G2P78344 907 aaKnown RBP eCLIP32.82■■■□□ 2.84
LMBR1-214ENST00000461469 LTV1Q96GA3 475 aaPredicted RBP32.82■■■□□ 2.84
LMBR1-214ENST00000461469 NUP188Q5SRE5 1749 aa32.82■■■□□ 2.84
LMBR1-214ENST00000461469 PSDA5PKW4 1024 aaPredicted RBP32.81■■■□□ 2.84
LMBR1-214ENST00000461469 EXOC5O00471 708 aa32.78■■■□□ 2.84
LMBR1-214ENST00000461469 BCL9O00512 1426 aa32.77■■■□□ 2.84
LMBR1-214ENST00000461469 POLR3GLQ9BT43 218 aa32.77■■■□□ 2.84
LMBR1-214ENST00000461469 AMPHP49418 695 aa32.76■■■□□ 2.83
LMBR1-214ENST00000461469 C11orf95C9JLR9 678 aaPredicted RBP32.75■■■□□ 2.83
LMBR1-214ENST00000461469 IL2RBP14784 551 aa32.75■■■□□ 2.83
LMBR1-214ENST00000461469 RTL1A6NKG5 1358 aa32.73■■■□□ 2.83
LMBR1-214ENST00000461469 PARD3Q8TEW0 1356 aa32.73■■■□□ 2.83
LMBR1-214ENST00000461469 RGPD3A6NKT7 1758 aaPredicted RBP32.72■■■□□ 2.83
LMBR1-214ENST00000461469 RGPD4Q7Z3J3 1758 aa32.72■■■□□ 2.83
LMBR1-214ENST00000461469 R3HDM1Q15032 1099 aaKnown RBP32.71■■■□□ 2.83
LMBR1-214ENST00000461469 BCL11BQ9C0K0 894 aaPredicted RBP32.7■■■□□ 2.83
LMBR1-214ENST00000461469 SHANK3Q9BYB0 1731 aa32.69■■■□□ 2.82
LMBR1-214ENST00000461469 NHSQ6T4R5 1651 aa32.68■■■□□ 2.82
LMBR1-214ENST00000461469 KCNQ2O43526 872 aa32.67■■■□□ 2.82
LMBR1-214ENST00000461469 HSP90AB2PQ58FF8 381 aa32.67■■■□□ 2.82
LMBR1-214ENST00000461469 ANKRD26Q9UPS8 1709 aa32.67■■■□□ 2.82
LMBR1-214ENST00000461469 EMILIN1Q9Y6C2 1016 aa32.66■■■□□ 2.82
LMBR1-214ENST00000461469 MEGF6O75095 1541 aa32.66■■■□□ 2.82
LMBR1-214ENST00000461469 MAP2P11137 1827 aaKnown RBP32.65■■■□□ 2.82
LMBR1-214ENST00000461469 NBPF6Q5VWK0 638 aa32.65■■■□□ 2.82
LMBR1-214ENST00000461469 NBPF4Q96M43 638 aa32.65■■■□□ 2.82
LMBR1-214ENST00000461469 LRP5O75197 1615 aa32.65■■■□□ 2.82
LMBR1-214ENST00000461469 INSRP06213 1382 aa32.63■■■□□ 2.81
LMBR1-214ENST00000461469 PLSCR1O15162 318 aa32.63■■■□□ 2.81
LMBR1-214ENST00000461469 USHBP1Q8N6Y0 703 aa32.63■■■□□ 2.81
LMBR1-214ENST00000461469 ACSBG1Q96GR2 724 aa32.63■■■□□ 2.81
LMBR1-214ENST00000461469 FLT4P35916 1363 aa32.62■■■□□ 2.81
LMBR1-214ENST00000461469 CGNL1Q0VF96 1302 aa32.62■■■□□ 2.81
LMBR1-214ENST00000461469 PROM2Q8N271 834 aa32.62■■■□□ 2.81
LMBR1-214ENST00000461469 PANK3Q9H999 370 aa32.61■■■□□ 2.81
LMBR1-214ENST00000461469 BTAF1O14981 1849 aa32.59■■■□□ 2.81
LMBR1-214ENST00000461469 KAT6BQ8WYB5 2073 aa32.59■■■□□ 2.81
LMBR1-214ENST00000461469 KIF24Q5T7B8 1368 aa32.58■■■□□ 2.81
LMBR1-214ENST00000461469 DDX54Q8TDD1 881 aaKnown RBP32.56■■■□□ 2.8
LMBR1-214ENST00000461469 ANO8Q9HCE9 1232 aaPredicted RBP32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms