RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
CD40-203ENST00000461171 EDC4Q6P2E9 1401 aaKnown RBP13.68□□□□□ -0.22
CD40-203ENST00000461171 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
CD40-203ENST00000461171 WNK3Q9BYP7 1800 aa13.68□□□□□ -0.22
CD40-203ENST00000461171 BAG6P46379 1132 aa13.67□□□□□ -0.22
CD40-203ENST00000461171 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
CD40-203ENST00000461171 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
CD40-203ENST00000461171 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
CD40-203ENST00000461171 PEAK1Q9H792 1746 aa13.67□□□□□ -0.22
CD40-203ENST00000461171 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
CD40-203ENST00000461171 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
CD40-203ENST00000461171 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
CD40-203ENST00000461171 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
CD40-203ENST00000461171 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
CD40-203ENST00000461171 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
CD40-203ENST00000461171 NME9Q86XW9 330 aa13.65□□□□□ -0.22
CD40-203ENST00000461171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
CD40-203ENST00000461171 USP47Q96K76 1375 aa13.65□□□□□ -0.22
CD40-203ENST00000461171 RGPD5Q99666 1765 aa13.65□□□□□ -0.22
CD40-203ENST00000461171 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
CD40-203ENST00000461171 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
CD40-203ENST00000461171 TERF2IPQ9NYB0 399 aa13.64□□□□□ -0.23
CD40-203ENST00000461171 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
CD40-203ENST00000461171 SOX12O15370 315 aa13.63□□□□□ -0.23
CD40-203ENST00000461171 TRIM37O94972 964 aa13.63□□□□□ -0.23
CD40-203ENST00000461171 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
CD40-203ENST00000461171 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
CD40-203ENST00000461171 LTN1O94822 1766 aa13.63□□□□□ -0.23
CD40-203ENST00000461171 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
CD40-203ENST00000461171 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
CD40-203ENST00000461171 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
CD40-203ENST00000461171 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
CD40-203ENST00000461171 RREB1Q92766 1687 aa13.62□□□□□ -0.23
CD40-203ENST00000461171 LRP5O75197 1615 aa13.61□□□□□ -0.23
CD40-203ENST00000461171 CAMKK2Q96RR4 588 aa13.61□□□□□ -0.23
CD40-203ENST00000461171 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
CD40-203ENST00000461171 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
CD40-203ENST00000461171 ERBB3P21860 1342 aa13.61□□□□□ -0.23
CD40-203ENST00000461171 ANKRD36BQ8N2N9 1353 aa13.6□□□□□ -0.23
CD40-203ENST00000461171 BCL9O00512 1426 aa13.6□□□□□ -0.23
CD40-203ENST00000461171 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
CD40-203ENST00000461171 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
CD40-203ENST00000461171 C11orf95C9JLR9 678 aaPredicted RBP13.59□□□□□ -0.23
CD40-203ENST00000461171 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
CD40-203ENST00000461171 DDB1Q16531 1140 aa13.59□□□□□ -0.23
CD40-203ENST00000461171 SBF2Q86WG5 1849 aa13.59□□□□□ -0.23
CD40-203ENST00000461171 NUP188Q5SRE5 1749 aa13.59□□□□□ -0.23
CD40-203ENST00000461171 RGPD3A6NKT7 1758 aaPredicted RBP13.58□□□□□ -0.23
CD40-203ENST00000461171 RGPD4Q7Z3J3 1758 aa13.58□□□□□ -0.23
CD40-203ENST00000461171 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
CD40-203ENST00000461171 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
CD40-203ENST00000461171 MYOM1P52179 1685 aa13.57□□□□□ -0.24
CD40-203ENST00000461171 APBA3O96018 575 aa13.57□□□□□ -0.24
CD40-203ENST00000461171 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
CD40-203ENST00000461171 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
CD40-203ENST00000461171 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
CD40-203ENST00000461171 TMF1P82094 1093 aa13.56□□□□□ -0.24
CD40-203ENST00000461171 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
CD40-203ENST00000461171 FAM208AQ9UK61 1670 aaKnown RBP13.55□□□□□ -0.24
CD40-203ENST00000461171 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
CD40-203ENST00000461171 R3HDM1Q15032 1099 aaKnown RBP13.53□□□□□ -0.24
CD40-203ENST00000461171 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
CD40-203ENST00000461171 IP6K1Q92551 441 aa13.53□□□□□ -0.24
CD40-203ENST00000461171 COG3Q96JB2 828 aa13.53□□□□□ -0.24
CD40-203ENST00000461171 NLRP2Q9NX02 1062 aa13.53□□□□□ -0.24
CD40-203ENST00000461171 CDCA8Q53HL2 280 aa13.52□□□□□ -0.25
CD40-203ENST00000461171 PTF1AQ7RTS3 328 aa13.52□□□□□ -0.25
CD40-203ENST00000461171 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
CD40-203ENST00000461171 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.25
CD40-203ENST00000461171 RTL1A6NKG5 1358 aa13.52□□□□□ -0.25
CD40-203ENST00000461171 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
CD40-203ENST00000461171 NHSQ6T4R5 1651 aa13.51□□□□□ -0.25
CD40-203ENST00000461171 FYB1O15117 783 aa13.51□□□□□ -0.25
CD40-203ENST00000461171 EXOC5O00471 708 aa13.5□□□□□ -0.25
CD40-203ENST00000461171 PLSCR1O15162 318 aa13.5□□□□□ -0.25
CD40-203ENST00000461171 IL2RBP14784 551 aa13.5□□□□□ -0.25
CD40-203ENST00000461171 FBLN1P23142 703 aa13.49□□□□□ -0.25
CD40-203ENST00000461171 HOXC9P31274 260 aa13.49□□□□□ -0.25
CD40-203ENST00000461171 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
CD40-203ENST00000461171 NSD3Q9BZ95 1437 aa13.47□□□□□ -0.25
CD40-203ENST00000461171 CARD14Q9BXL6 1004 aa13.47□□□□□ -0.25
CD40-203ENST00000461171 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
CD40-203ENST00000461171 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.25
CD40-203ENST00000461171 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
CD40-203ENST00000461171 PROM2Q8N271 834 aa13.46□□□□□ -0.25
CD40-203ENST00000461171 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
CD40-203ENST00000461171 SHANK3Q9BYB0 1731 aa13.46□□□□□ -0.25
CD40-203ENST00000461171 ANKRD26Q9UPS8 1709 aa13.46□□□□□ -0.25
CD40-203ENST00000461171 MEGF6O75095 1541 aa13.45□□□□□ -0.26
CD40-203ENST00000461171 KCNQ2O43526 872 aa13.45□□□□□ -0.26
CD40-203ENST00000461171 AMPHP49418 695 aa13.45□□□□□ -0.26
CD40-203ENST00000461171 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
CD40-203ENST00000461171 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
CD40-203ENST00000461171 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
CD40-203ENST00000461171 BTAF1O14981 1849 aa13.44□□□□□ -0.26
CD40-203ENST00000461171 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
CD40-203ENST00000461171 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
CD40-203ENST00000461171 INSRP06213 1382 aa13.44□□□□□ -0.26
CD40-203ENST00000461171 FLT4P35916 1363 aa13.44□□□□□ -0.26
CD40-203ENST00000461171 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms