RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 NLRP6P59044 892 aa25.08■■□□□ 1.61
TOP3A-202ENST00000461127 PROM2Q8N271 834 aa25.07■■□□□ 1.6
TOP3A-202ENST00000461127 BCL9O00512 1426 aa25.06■■□□□ 1.6
TOP3A-202ENST00000461127 SENP3-EIF4A1A0A087X0R7 540 aa25.06■■□□□ 1.6
TOP3A-202ENST00000461127 PTF1AQ7RTS3 328 aa25.06■■□□□ 1.6
TOP3A-202ENST00000461127 SYT17Q9BSW7 474 aa25.06■■□□□ 1.6
TOP3A-202ENST00000461127 FHDC1Q9C0D6 1143 aaPredicted RBP25.06■■□□□ 1.6
TOP3A-202ENST00000461127 UTRNP46939 3433 aa25.05■■□□□ 1.6
TOP3A-202ENST00000461127 AKAP12Q02952 1782 aa25.04■■□□□ 1.6
TOP3A-202ENST00000461127 SLC15A2Q16348 729 aa25.04■■□□□ 1.6
TOP3A-202ENST00000461127 TXNRD1Q16881 649 aa25.04■■□□□ 1.6
TOP3A-202ENST00000461127 MARCH10Q8NA82 808 aaPredicted RBP25.04■■□□□ 1.6
TOP3A-202ENST00000461127 WDR17Q8IZU2 1322 aa25.04■■□□□ 1.6
TOP3A-202ENST00000461127 CHD4Q14839 1912 aa25.04■■□□□ 1.6
TOP3A-202ENST00000461127 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
TOP3A-202ENST00000461127 SLIT3O75094 1523 aa25.02■■□□□ 1.6
TOP3A-202ENST00000461127 WNK3Q9BYP7 1800 aa25.01■■□□□ 1.59
TOP3A-202ENST00000461127 KIAA1210Q9ULL0 1709 aa25■■□□□ 1.59
TOP3A-202ENST00000461127 C1QTNF8P60827 252 aa25■■□□□ 1.59
TOP3A-202ENST00000461127 CABP2Q9NPB3 220 aa25■■□□□ 1.59
TOP3A-202ENST00000461127 USP6P35125 1406 aa25■■□□□ 1.59
TOP3A-202ENST00000461127 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
TOP3A-202ENST00000461127 CSB-PGBD3P0DP91 1061 aa24.98■■□□□ 1.59
TOP3A-202ENST00000461127 EXOC5O00471 708 aa24.97■■□□□ 1.59
TOP3A-202ENST00000461127 CARD10Q9BWT7 1032 aa24.97■■□□□ 1.59
TOP3A-202ENST00000461127 CABP1Q9NZU7 370 aa24.97■■□□□ 1.59
TOP3A-202ENST00000461127 AXIN2Q9Y2T1 843 aa24.97■■□□□ 1.59
TOP3A-202ENST00000461127 COL18A1P39060 1754 aa24.97■■□□□ 1.59
TOP3A-202ENST00000461127 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.59
TOP3A-202ENST00000461127 ARXQ96QS3 562 aa24.95■■□□□ 1.58
TOP3A-202ENST00000461127 KCNH5Q8NCM2 988 aa24.94■■□□□ 1.58
TOP3A-202ENST00000461127 SGIP1Q9BQI5 828 aa24.94■■□□□ 1.58
TOP3A-202ENST00000461127 NBPF1Q3BBV0 1214 aa24.93■■□□□ 1.58
TOP3A-202ENST00000461127 ARHGEF25Q86VW2 580 aa24.92■■□□□ 1.58
TOP3A-202ENST00000461127 CCDC7Q96M83 1385 aa24.91■■□□□ 1.58
TOP3A-202ENST00000461127 MAP3K5Q99683 1374 aa24.91■■□□□ 1.58
TOP3A-202ENST00000461127 PIK3C2AO00443 1686 aa24.91■■□□□ 1.58
TOP3A-202ENST00000461127 QRICH2Q9H0J4 1663 aa24.9■■□□□ 1.58
TOP3A-202ENST00000461127 GPR162Q16538 588 aa24.89■■□□□ 1.58
TOP3A-202ENST00000461127 TNS2Q63HR2 1409 aa24.88■■□□□ 1.57
TOP3A-202ENST00000461127 SOX12O15370 315 aa24.88■■□□□ 1.57
TOP3A-202ENST00000461127 RGPD5Q99666 1765 aa24.88■■□□□ 1.57
TOP3A-202ENST00000461127 NHSQ6T4R5 1651 aa24.86■■□□□ 1.57
TOP3A-202ENST00000461127 ZNF692Q9BU19 519 aaPredicted RBP24.86■■□□□ 1.57
TOP3A-202ENST00000461127 GIGYF1O75420 1035 aaPredicted RBP24.85■■□□□ 1.57
TOP3A-202ENST00000461127 ACSBG1Q96GR2 724 aa24.85■■□□□ 1.57
TOP3A-202ENST00000461127 TTC21BQ7Z4L5 1316 aa24.85■■□□□ 1.57
TOP3A-202ENST00000461127 EVC2Q86UK5 1308 aa24.85■■□□□ 1.57
TOP3A-202ENST00000461127 IFFO2Q5TF58 517 aa24.84■■□□□ 1.57
TOP3A-202ENST00000461127 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
TOP3A-202ENST00000461127 TTC21AQ8NDW8 1320 aa24.83■■□□□ 1.56
TOP3A-202ENST00000461127 KAT6BQ8WYB5 2073 aa24.81■■□□□ 1.56
TOP3A-202ENST00000461127 POLD1P28340 1107 aa24.81■■□□□ 1.56
TOP3A-202ENST00000461127 KLHL34Q8N239 644 aa24.81■■□□□ 1.56
TOP3A-202ENST00000461127 ABCC6O95255 1503 aa24.81■■□□□ 1.56
TOP3A-202ENST00000461127 PAPPAQ13219 1627 aa24.8■■□□□ 1.56
TOP3A-202ENST00000461127 SLC16A10Q8TF71 515 aa24.8■■□□□ 1.56
TOP3A-202ENST00000461127 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
TOP3A-202ENST00000461127 ZNF827Q17R98 1081 aa24.78■■□□□ 1.56
TOP3A-202ENST00000461127 NFAT5O94916 1531 aa24.77■■□□□ 1.56
TOP3A-202ENST00000461127 IL2RBP14784 551 aa24.77■■□□□ 1.56
TOP3A-202ENST00000461127 NLRP2Q9NX02 1062 aa24.77■■□□□ 1.56
TOP3A-202ENST00000461127 BTAF1O14981 1849 aa24.77■■□□□ 1.56
TOP3A-202ENST00000461127 KTN1Q86UP2 1357 aaKnown RBP24.73■■□□□ 1.55
TOP3A-202ENST00000461127 ERBB3P21860 1342 aa24.73■■□□□ 1.55
TOP3A-202ENST00000461127 LRRC4BQ9NT99 713 aa24.73■■□□□ 1.55
TOP3A-202ENST00000461127 SLC27A3Q5K4L6 730 aa24.72■■□□□ 1.55
TOP3A-202ENST00000461127 AKT1S1Q96B36 256 aa24.71■■□□□ 1.55
TOP3A-202ENST00000461127 GOLGB1Q14789 3259 aaKnown RBP24.71■■□□□ 1.55
TOP3A-202ENST00000461127 QSER1Q2KHR3 1735 aa24.69■■□□□ 1.54
TOP3A-202ENST00000461127 TFCP2L1Q9NZI6 479 aa24.69■■□□□ 1.54
TOP3A-202ENST00000461127 CEP350Q5VT06 3117 aa24.69■■□□□ 1.54
TOP3A-202ENST00000461127 GRIN3BO60391 1043 aa24.68■■□□□ 1.54
TOP3A-202ENST00000461127 PNPLA7Q6ZV29 1317 aa24.66■■□□□ 1.54
TOP3A-202ENST00000461127 ANKRD24Q8TF21 1146 aa24.66■■□□□ 1.54
TOP3A-202ENST00000461127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.65■■□□□ 1.54
TOP3A-202ENST00000461127 SHANK3Q9BYB0 1731 aa24.65■■□□□ 1.54
TOP3A-202ENST00000461127 USP31Q70CQ4 1352 aa24.65■■□□□ 1.54
TOP3A-202ENST00000461127 COL24A1Q17RW2 1714 aa24.64■■□□□ 1.54
TOP3A-202ENST00000461127 NLGN2Q8NFZ4 835 aa24.64■■□□□ 1.54
TOP3A-202ENST00000461127 LTN1O94822 1766 aa24.63■■□□□ 1.53
TOP3A-202ENST00000461127 DDX54Q8TDD1 881 aaKnown RBP24.63■■□□□ 1.53
TOP3A-202ENST00000461127 MON2Q7Z3U7 1717 aa24.62■■□□□ 1.53
TOP3A-202ENST00000461127 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
TOP3A-202ENST00000461127 USP54Q70EL1 1684 aa24.59■■□□□ 1.53
TOP3A-202ENST00000461127 ROCK2O75116 1388 aaKnown RBP24.59■■□□□ 1.53
TOP3A-202ENST00000461127 NME9Q86XW9 330 aa24.59■■□□□ 1.53
TOP3A-202ENST00000461127 MSH5O43196 834 aa24.58■■□□□ 1.53
TOP3A-202ENST00000461127 YBX3P16989 372 aaKnown RBP eCLIP24.58■■□□□ 1.53
TOP3A-202ENST00000461127 L3MBTL2Q969R5 705 aa24.58■■□□□ 1.53
TOP3A-202ENST00000461127 TUBGCP6Q96RT7 1819 aa24.58■■□□□ 1.53
TOP3A-202ENST00000461127 KCNQ4P56696 695 aa24.57■■□□□ 1.52
TOP3A-202ENST00000461127 PRIM1P49642 420 aaKnown RBP24.56■■□□□ 1.52
TOP3A-202ENST00000461127 ANKRD36BQ8N2N9 1353 aa24.55■■□□□ 1.52
TOP3A-202ENST00000461127 HDGFL2Q7Z4V5 671 aaPredicted RBP24.55■■□□□ 1.52
TOP3A-202ENST00000461127 ATP10DQ9P241 1426 aa24.54■■□□□ 1.52
TOP3A-202ENST00000461127 GPBP1L1Q9HC44 474 aaPredicted RBP24.54■■□□□ 1.52
TOP3A-202ENST00000461127 SBNO2Q9Y2G9 1366 aa24.54■■□□□ 1.52
TOP3A-202ENST00000461127 CCNL1Q9UK58 526 aaPredicted RBP24.53■■□□□ 1.52
TOP3A-202ENST00000461127 FAM208AQ9UK61 1670 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms