RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
SMARCD3-204ENST00000460431 OVOS2A0A0J9YW53 1432 aa22.86■■□□□ 1.25
SMARCD3-204ENST00000460431 OVOS2Q6IE36 1432 aa22.86■■□□□ 1.25
SMARCD3-204ENST00000460431 FAM182BQ5T319 152 aa22.86■■□□□ 1.25
SMARCD3-204ENST00000460431 THSD7AQ9UPZ6 1657 aa22.86■■□□□ 1.25
SMARCD3-204ENST00000460431 RGPD5Q99666 1765 aa22.86■■□□□ 1.25
SMARCD3-204ENST00000460431 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
SMARCD3-204ENST00000460431 LARP1Q6PKG0 1096 aaKnown RBP22.84■■□□□ 1.25
SMARCD3-204ENST00000460431 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
SMARCD3-204ENST00000460431 AXIN2Q9Y2T1 843 aa22.84■■□□□ 1.25
SMARCD3-204ENST00000460431 FYB1O15117 783 aa22.83■■□□□ 1.25
SMARCD3-204ENST00000460431 LTN1O94822 1766 aa22.82■■□□□ 1.24
SMARCD3-204ENST00000460431 C11orf95C9JLR9 678 aaPredicted RBP22.82■■□□□ 1.24
SMARCD3-204ENST00000460431 BARGINQ6ZT62 677 aa22.82■■□□□ 1.24
SMARCD3-204ENST00000460431 COG3Q96JB2 828 aa22.82■■□□□ 1.24
SMARCD3-204ENST00000460431 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
SMARCD3-204ENST00000460431 USP35Q9P2H5 1018 aa22.82■■□□□ 1.24
SMARCD3-204ENST00000460431 SRCAPQ6ZRS2 3230 aa22.81■■□□□ 1.24
SMARCD3-204ENST00000460431 BAG6P46379 1132 aa22.8■■□□□ 1.24
SMARCD3-204ENST00000460431 ABCC6O95255 1503 aa22.79■■□□□ 1.24
SMARCD3-204ENST00000460431 KIF20BQ96Q89 1820 aa22.78■■□□□ 1.24
SMARCD3-204ENST00000460431 CRB1P82279 1406 aa22.78■■□□□ 1.24
SMARCD3-204ENST00000460431 TCP11L2Q8N4U5 519 aa22.78■■□□□ 1.24
SMARCD3-204ENST00000460431 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
SMARCD3-204ENST00000460431 THRAP3Q9Y2W1 955 aaKnown RBP22.77■■□□□ 1.24
SMARCD3-204ENST00000460431 WDR17Q8IZU2 1322 aa22.77■■□□□ 1.24
SMARCD3-204ENST00000460431 NSD3Q9BZ95 1437 aa22.76■■□□□ 1.23
SMARCD3-204ENST00000460431 EN1Q05925 392 aaPredicted RBP22.76■■□□□ 1.23
SMARCD3-204ENST00000460431 FAM196AQ6ZSG2 479 aa22.75■■□□□ 1.23
SMARCD3-204ENST00000460431 TOM1L2Q6ZVM7 507 aa22.74■■□□□ 1.23
SMARCD3-204ENST00000460431 FBLN1P23142 703 aa22.73■■□□□ 1.23
SMARCD3-204ENST00000460431 DISP2A7MBM2 1401 aa22.73■■□□□ 1.23
SMARCD3-204ENST00000460431 TRIM37O94972 964 aa22.72■■□□□ 1.23
SMARCD3-204ENST00000460431 PDE3BQ13370 1112 aa22.72■■□□□ 1.23
SMARCD3-204ENST00000460431 IP6K1Q92551 441 aa22.72■■□□□ 1.23
SMARCD3-204ENST00000460431 PANK3Q9H999 370 aa22.72■■□□□ 1.23
SMARCD3-204ENST00000460431 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
SMARCD3-204ENST00000460431 CARD10Q9BWT7 1032 aa22.71■■□□□ 1.23
SMARCD3-204ENST00000460431 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
SMARCD3-204ENST00000460431 KIF7Q2M1P5 1343 aa22.71■■□□□ 1.23
SMARCD3-204ENST00000460431 MAP3K19Q56UN5 1328 aa22.71■■□□□ 1.23
SMARCD3-204ENST00000460431 RGPD1P0DJD0 1748 aa22.7■■□□□ 1.22
SMARCD3-204ENST00000460431 ERBB3P21860 1342 aa22.69■■□□□ 1.22
SMARCD3-204ENST00000460431 CAMKK2Q96RR4 588 aa22.68■■□□□ 1.22
SMARCD3-204ENST00000460431 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
SMARCD3-204ENST00000460431 PSDA5PKW4 1024 aaPredicted RBP22.67■■□□□ 1.22
SMARCD3-204ENST00000460431 AMPHP49418 695 aa22.67■■□□□ 1.22
SMARCD3-204ENST00000460431 EZH2Q15910 746 aaKnown RBP22.67■■□□□ 1.22
SMARCD3-204ENST00000460431 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
SMARCD3-204ENST00000460431 TNS1Q9HBL0 1735 aaKnown RBP22.66■■□□□ 1.22
SMARCD3-204ENST00000460431 HOXC9P31274 260 aa22.66■■□□□ 1.22
SMARCD3-204ENST00000460431 RRS1Q15050 365 aaKnown RBP22.66■■□□□ 1.22
SMARCD3-204ENST00000460431 WNK3Q9BYP7 1800 aa22.66■■□□□ 1.22
SMARCD3-204ENST00000460431 CDCA7Q9BWT1 371 aaPredicted RBP22.65■■□□□ 1.22
SMARCD3-204ENST00000460431 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
SMARCD3-204ENST00000460431 MAP2P11137 1827 aaKnown RBP22.64■■□□□ 1.22
SMARCD3-204ENST00000460431 APBA3O96018 575 aa22.64■■□□□ 1.21
SMARCD3-204ENST00000460431 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
SMARCD3-204ENST00000460431 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
SMARCD3-204ENST00000460431 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
SMARCD3-204ENST00000460431 FAM208AQ9UK61 1670 aaKnown RBP22.61■■□□□ 1.21
SMARCD3-204ENST00000460431 KIF24Q5T7B8 1368 aa22.61■■□□□ 1.21
SMARCD3-204ENST00000460431 R3HDM1Q15032 1099 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-204ENST00000460431 DDB1Q16531 1140 aa22.6■■□□□ 1.21
SMARCD3-204ENST00000460431 LTV1Q96GA3 475 aaPredicted RBP22.6■■□□□ 1.21
SMARCD3-204ENST00000460431 PARD3Q8TEW0 1356 aa22.6■■□□□ 1.21
SMARCD3-204ENST00000460431 PEAK1Q9H792 1746 aa22.6■■□□□ 1.21
SMARCD3-204ENST00000460431 WASHC2AQ641Q2 1341 aa22.59■■□□□ 1.21
SMARCD3-204ENST00000460431 KNSTRNQ9Y448 316 aa22.59■■□□□ 1.21
SMARCD3-204ENST00000460431 LRRC37A3O60309 1634 aa22.59■■□□□ 1.21
SMARCD3-204ENST00000460431 NSD2O96028 1365 aa22.59■■□□□ 1.21
SMARCD3-204ENST00000460431 RGPD2P0DJD1 1756 aa22.58■■□□□ 1.21
SMARCD3-204ENST00000460431 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
SMARCD3-204ENST00000460431 EMILIN1Q9Y6C2 1016 aa22.57■■□□□ 1.2
SMARCD3-204ENST00000460431 INSRP06213 1382 aa22.57■■□□□ 1.2
SMARCD3-204ENST00000460431 FLT4P35916 1363 aa22.57■■□□□ 1.2
SMARCD3-204ENST00000460431 PER1O15534 1290 aaPredicted RBP22.56■■□□□ 1.2
SMARCD3-204ENST00000460431 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
SMARCD3-204ENST00000460431 EXOC5O00471 708 aa22.55■■□□□ 1.2
SMARCD3-204ENST00000460431 IL2RBP14784 551 aa22.55■■□□□ 1.2
SMARCD3-204ENST00000460431 POLKQ9UBT6 870 aa22.55■■□□□ 1.2
SMARCD3-204ENST00000460431 LRP5O75197 1615 aa22.54■■□□□ 1.2
SMARCD3-204ENST00000460431 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
SMARCD3-204ENST00000460431 MARCH10Q8NA82 808 aaPredicted RBP22.54■■□□□ 1.2
SMARCD3-204ENST00000460431 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
SMARCD3-204ENST00000460431 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
SMARCD3-204ENST00000460431 SBF2Q86WG5 1849 aa22.52■■□□□ 1.2
SMARCD3-204ENST00000460431 SMG6Q86US8 1419 aaKnown RBP22.51■■□□□ 1.19
SMARCD3-204ENST00000460431 NBPF6Q5VWK0 638 aa22.51■■□□□ 1.19
SMARCD3-204ENST00000460431 PTF1AQ7RTS3 328 aa22.51■■□□□ 1.19
SMARCD3-204ENST00000460431 MORC1Q86VD1 984 aa22.51■■□□□ 1.19
SMARCD3-204ENST00000460431 NBPF4Q96M43 638 aa22.51■■□□□ 1.19
SMARCD3-204ENST00000460431 BCL9O00512 1426 aa22.5■■□□□ 1.19
SMARCD3-204ENST00000460431 TNS2Q63HR2 1409 aa22.49■■□□□ 1.19
SMARCD3-204ENST00000460431 BCL11BQ9C0K0 894 aaPredicted RBP22.49■■□□□ 1.19
SMARCD3-204ENST00000460431 RREB1Q92766 1687 aa22.49■■□□□ 1.19
SMARCD3-204ENST00000460431 PLSCR1O15162 318 aa22.48■■□□□ 1.19
SMARCD3-204ENST00000460431 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
SMARCD3-204ENST00000460431 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
SMARCD3-204ENST00000460431 USHBP1Q8N6Y0 703 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms