RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
TTC3-211ENST00000460328 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
TTC3-211ENST00000460328 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
TTC3-211ENST00000460328 PTK2Q05397 1052 aa8.41□□□□□ -1.06
TTC3-211ENST00000460328 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
TTC3-211ENST00000460328 PURBQ96QR8 312 aaKnown RBP8.41□□□□□ -1.06
TTC3-211ENST00000460328 TRIM34Q9BYJ4 488 aa8.41□□□□□ -1.06
TTC3-211ENST00000460328 SCARF1Q14162 830 aa8.4□□□□□ -1.06
TTC3-211ENST00000460328 CCDC116Q8IYX3 515 aa8.4□□□□□ -1.06
TTC3-211ENST00000460328 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
TTC3-211ENST00000460328 GPSM3Q9Y4H4 160 aa8.4□□□□□ -1.06
TTC3-211ENST00000460328 KCTD15Q96SI1 283 aaPredicted RBP8.39□□□□□ -1.07
TTC3-211ENST00000460328 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
TTC3-211ENST00000460328 CDV3Q9UKY7 258 aaKnown RBP8.38□□□□□ -1.07
TTC3-211ENST00000460328 EMILIN1Q9Y6C2 1016 aa8.38□□□□□ -1.07
TTC3-211ENST00000460328 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
TTC3-211ENST00000460328 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
TTC3-211ENST00000460328 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
TTC3-211ENST00000460328 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
TTC3-211ENST00000460328 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
TTC3-211ENST00000460328 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
TTC3-211ENST00000460328 SOBPA7XYQ1 873 aa8.35□□□□□ -1.07
TTC3-211ENST00000460328 BMP2P12643 396 aa8.35□□□□□ -1.07
TTC3-211ENST00000460328 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
TTC3-211ENST00000460328 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
TTC3-211ENST00000460328 UPP2O95045 317 aa8.34□□□□□ -1.07
TTC3-211ENST00000460328 CBLBQ13191 982 aa8.34□□□□□ -1.07
TTC3-211ENST00000460328 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
TTC3-211ENST00000460328 NPAS3Q8IXF0 933 aa8.34□□□□□ -1.07
TTC3-211ENST00000460328 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
TTC3-211ENST00000460328 RAB15P59190 212 aa8.33□□□□□ -1.08
TTC3-211ENST00000460328 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
TTC3-211ENST00000460328 DHX9Q08211 1270 aaKnown RBP8.32□□□□□ -1.08
TTC3-211ENST00000460328 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
TTC3-211ENST00000460328 FAM181BA6NEQ2 426 aa8.31□□□□□ -1.08
TTC3-211ENST00000460328 ZBBXA8MT70 800 aa8.31□□□□□ -1.08
TTC3-211ENST00000460328 VEGFBP49765 207 aa8.31□□□□□ -1.08
TTC3-211ENST00000460328 MTMR14Q8NCE2 650 aa8.31□□□□□ -1.08
TTC3-211ENST00000460328 TSEN34Q9BSV6 310 aaKnown RBP8.31□□□□□ -1.08
TTC3-211ENST00000460328 MAN1A2O60476 641 aa8.3□□□□□ -1.08
TTC3-211ENST00000460328 FBXO45P0C2W1 286 aa8.3□□□□□ -1.08
TTC3-211ENST00000460328 Q6ZVU0 165 aa8.3□□□□□ -1.08
TTC3-211ENST00000460328 IRF7Q92985 503 aa8.3□□□□□ -1.08
TTC3-211ENST00000460328 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
TTC3-211ENST00000460328 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
TTC3-211ENST00000460328 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
TTC3-211ENST00000460328 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
TTC3-211ENST00000460328 ESPNB1AK53 854 aa8.28□□□□□ -1.08
TTC3-211ENST00000460328 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
TTC3-211ENST00000460328 GPR37L1O60883 481 aa8.28□□□□□ -1.08
TTC3-211ENST00000460328 GMPRP36959 345 aa8.28□□□□□ -1.08
TTC3-211ENST00000460328 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
TTC3-211ENST00000460328 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
TTC3-211ENST00000460328 NDUFB9Q9Y6M9 179 aa8.28□□□□□ -1.08
TTC3-211ENST00000460328 H3BM21 787 aa8.27□□□□□ -1.09
TTC3-211ENST00000460328 SOCS7O14512 581 aa8.27□□□□□ -1.09
TTC3-211ENST00000460328 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
TTC3-211ENST00000460328 AGBL1Q96MI9 1066 aa8.27□□□□□ -1.09
TTC3-211ENST00000460328 RELBQ01201 579 aa8.26□□□□□ -1.09
TTC3-211ENST00000460328 ZSCAN1Q8NBB4 408 aa8.26□□□□□ -1.09
TTC3-211ENST00000460328 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
TTC3-211ENST00000460328 SPINT1O43278 529 aa8.25□□□□□ -1.09
TTC3-211ENST00000460328 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
TTC3-211ENST00000460328 NR1H3Q13133 447 aa8.25□□□□□ -1.09
TTC3-211ENST00000460328 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
TTC3-211ENST00000460328 APBB1O00213 710 aa8.24□□□□□ -1.09
TTC3-211ENST00000460328 LILRA1O75019 489 aa8.24□□□□□ -1.09
TTC3-211ENST00000460328 SEPT12Q8IYM1 358 aa8.24□□□□□ -1.09
TTC3-211ENST00000460328 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
TTC3-211ENST00000460328 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
TTC3-211ENST00000460328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.23□□□□□ -1.09
TTC3-211ENST00000460328 ZNF395Q9H8N7 513 aaPredicted RBP8.23□□□□□ -1.09
TTC3-211ENST00000460328 CYLDQ9NQC7 956 aa8.23□□□□□ -1.09
TTC3-211ENST00000460328 ADH1AP07327 375 aa8.22□□□□□ -1.09
TTC3-211ENST00000460328 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
TTC3-211ENST00000460328 INSM2Q96T92 566 aaPredicted RBP8.22□□□□□ -1.09
TTC3-211ENST00000460328 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
TTC3-211ENST00000460328 POLMQ9NP87 494 aaPredicted RBP8.21□□□□□ -1.1
TTC3-211ENST00000460328 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
TTC3-211ENST00000460328 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
TTC3-211ENST00000460328 PTGIRP43119 386 aa8.19□□□□□ -1.1
TTC3-211ENST00000460328 KDF1Q8NAX2 398 aaPredicted RBP8.19□□□□□ -1.1
TTC3-211ENST00000460328 VSIG8P0DPA2 414 aa8.18□□□□□ -1.1
TTC3-211ENST00000460328 MCCD1P59942 119 aaPredicted RBP8.18□□□□□ -1.1
TTC3-211ENST00000460328 PTSQ03393 145 aa8.18□□□□□ -1.1
TTC3-211ENST00000460328 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
TTC3-211ENST00000460328 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
TTC3-211ENST00000460328 RNF217Q8TC41 542 aa8.17□□□□□ -1.1
TTC3-211ENST00000460328 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
TTC3-211ENST00000460328 ERVK-9P63128 1117 aa8.16□□□□□ -1.1
TTC3-211ENST00000460328 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
TTC3-211ENST00000460328 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
TTC3-211ENST00000460328 CCDC125Q86Z20 511 aa8.16□□□□□ -1.1
TTC3-211ENST00000460328 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
TTC3-211ENST00000460328 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
TTC3-211ENST00000460328 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
TTC3-211ENST00000460328 SCTRP47872 440 aa8.15□□□□□ -1.1
TTC3-211ENST00000460328 IRF5Q13568 498 aa8.15□□□□□ -1.1
TTC3-211ENST00000460328 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
TTC3-211ENST00000460328 GDPD2Q9HCC8 539 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms