RNA–Protein interactions for RNA: ENST00000460273.1

GRIN1-209, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 3

Gene GRIN1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-209ENST00000460273 RGS12O14924 1447 aa28.55■■■□□ 2.16
GRIN1-209ENST00000460273 AXIN2Q9Y2T1 843 aa28.55■■■□□ 2.16
GRIN1-209ENST00000460273 WNK3Q9BYP7 1800 aa28.53■■■□□ 2.16
GRIN1-209ENST00000460273 RXRBP28702 533 aa28.53■■■□□ 2.16
GRIN1-209ENST00000460273 VPS72Q15906 364 aa28.53■■■□□ 2.16
GRIN1-209ENST00000460273 KNSTRNQ9Y448 316 aa28.53■■■□□ 2.16
GRIN1-209ENST00000460273 MAP3K19Q56UN5 1328 aa28.52■■■□□ 2.16
GRIN1-209ENST00000460273 PER1O15534 1290 aaPredicted RBP28.52■■■□□ 2.16
GRIN1-209ENST00000460273 RBM6P78332 1123 aaKnown RBP28.52■■■□□ 2.16
GRIN1-209ENST00000460273 CCDC9Q9Y3X0 531 aaKnown RBP28.52■■■□□ 2.16
GRIN1-209ENST00000460273 NSD2O96028 1365 aa28.51■■■□□ 2.16
GRIN1-209ENST00000460273 RRS1Q15050 365 aaKnown RBP28.51■■■□□ 2.15
GRIN1-209ENST00000460273 GJD4Q96KN9 370 aaPredicted RBP28.51■■■□□ 2.15
GRIN1-209ENST00000460273 BRWD3Q6RI45 1802 aa28.5■■■□□ 2.15
GRIN1-209ENST00000460273 RGPD2P0DJD1 1756 aa28.5■■■□□ 2.15
GRIN1-209ENST00000460273 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
GRIN1-209ENST00000460273 CDK12Q9NYV4 1490 aaPredicted RBP28.49■■■□□ 2.15
GRIN1-209ENST00000460273 LARP1Q6PKG0 1096 aaKnown RBP28.49■■■□□ 2.15
GRIN1-209ENST00000460273 FAM208AQ9UK61 1670 aaKnown RBP28.48■■■□□ 2.15
GRIN1-209ENST00000460273 SPATA31A5Q5VU36 1347 aa28.47■■■□□ 2.15
GRIN1-209ENST00000460273 SPATA31A7Q8IWB4 1347 aa28.47■■■□□ 2.15
GRIN1-209ENST00000460273 EVA1CP58658 441 aa28.47■■■□□ 2.15
GRIN1-209ENST00000460273 THSD7AQ9UPZ6 1657 aa28.47■■■□□ 2.15
GRIN1-209ENST00000460273 TNNT2P45379 298 aaPredicted RBP28.46■■■□□ 2.15
GRIN1-209ENST00000460273 BLMP54132 1417 aaPredicted RBP28.45■■■□□ 2.15
GRIN1-209ENST00000460273 RTL1A6NKG5 1358 aa28.45■■■□□ 2.14
GRIN1-209ENST00000460273 CRB1P82279 1406 aa28.44■■■□□ 2.14
GRIN1-209ENST00000460273 CNGB1Q14028 1251 aaPredicted RBP28.44■■■□□ 2.14
GRIN1-209ENST00000460273 EMILIN1Q9Y6C2 1016 aa28.44■■■□□ 2.14
GRIN1-209ENST00000460273 SPATA31A1Q5TZJ5 1347 aa28.43■■■□□ 2.14
GRIN1-209ENST00000460273 HOXC9P31274 260 aa28.43■■■□□ 2.14
GRIN1-209ENST00000460273 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
GRIN1-209ENST00000460273 WDR17Q8IZU2 1322 aa28.43■■■□□ 2.14
GRIN1-209ENST00000460273 AMPHP49418 695 aa28.42■■■□□ 2.14
GRIN1-209ENST00000460273 CC2D1BQ5T0F9 858 aaKnown RBP28.42■■■□□ 2.14
GRIN1-209ENST00000460273 IP6K1Q92551 441 aa28.42■■■□□ 2.14
GRIN1-209ENST00000460273 ERBB3P21860 1342 aa28.42■■■□□ 2.14
GRIN1-209ENST00000460273 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
GRIN1-209ENST00000460273 FAM98CQ17RN3 349 aaKnown RBP28.39■■■□□ 2.14
GRIN1-209ENST00000460273 ANKRD24Q8TF21 1146 aa28.39■■■□□ 2.14
GRIN1-209ENST00000460273 FLT4P35916 1363 aa28.38■■■□□ 2.13
GRIN1-209ENST00000460273 SMG6Q86US8 1419 aaKnown RBP28.38■■■□□ 2.13
GRIN1-209ENST00000460273 CSB-PGBD3P0DP91 1061 aa28.38■■■□□ 2.13
GRIN1-209ENST00000460273 TOM1L2Q6ZVM7 507 aa28.38■■■□□ 2.13
GRIN1-209ENST00000460273 LTV1Q96GA3 475 aaPredicted RBP28.38■■■□□ 2.13
GRIN1-209ENST00000460273 PARP4Q9UKK3 1724 aaKnown RBP28.38■■■□□ 2.13
GRIN1-209ENST00000460273 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
GRIN1-209ENST00000460273 LRRC37A3O60309 1634 aa28.37■■■□□ 2.13
GRIN1-209ENST00000460273 PPM1GO15355 546 aaPredicted RBP28.36■■■□□ 2.13
GRIN1-209ENST00000460273 POLKQ9UBT6 870 aa28.36■■■□□ 2.13
GRIN1-209ENST00000460273 DDX10Q13206 875 aaKnown RBP28.35■■■□□ 2.13
GRIN1-209ENST00000460273 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
GRIN1-209ENST00000460273 HSP90AB2PQ58FF8 381 aa28.34■■■□□ 2.13
GRIN1-209ENST00000460273 A0A0G2JS52 829 aa28.33■■■□□ 2.13
GRIN1-209ENST00000460273 MYT1Q01538 1121 aa28.33■■■□□ 2.13
GRIN1-209ENST00000460273 SEPT12Q8IYM1 358 aa28.33■■■□□ 2.13
GRIN1-209ENST00000460273 INSRP06213 1382 aa28.33■■■□□ 2.13
GRIN1-209ENST00000460273 TCP11L2Q8N4U5 519 aa28.32■■■□□ 2.12
GRIN1-209ENST00000460273 ONECUT3O60422 494 aaPredicted RBP28.31■■■□□ 2.12
GRIN1-209ENST00000460273 CARD10Q9BWT7 1032 aa28.3■■■□□ 2.12
GRIN1-209ENST00000460273 NLRP2Q9NX02 1062 aa28.3■■■□□ 2.12
GRIN1-209ENST00000460273 DISP2A7MBM2 1401 aa28.29■■■□□ 2.12
GRIN1-209ENST00000460273 ZNF316A6NFI3 1004 aaPredicted RBP28.28■■■□□ 2.12
GRIN1-209ENST00000460273 BARGINQ6ZT62 677 aa28.28■■■□□ 2.12
GRIN1-209ENST00000460273 THRAP3Q9Y2W1 955 aaKnown RBP28.26■■■□□ 2.11
GRIN1-209ENST00000460273 USHBP1Q8N6Y0 703 aa28.24■■■□□ 2.11
GRIN1-209ENST00000460273 SHANK3Q9BYB0 1731 aa28.23■■■□□ 2.11
GRIN1-209ENST00000460273 RGPD1P0DJD0 1748 aa28.23■■■□□ 2.11
GRIN1-209ENST00000460273 NBPF6Q5VWK0 638 aa28.22■■■□□ 2.11
GRIN1-209ENST00000460273 NBPF4Q96M43 638 aa28.22■■■□□ 2.11
GRIN1-209ENST00000460273 MEGF6O75095 1541 aa28.21■■■□□ 2.11
GRIN1-209ENST00000460273 EIF4A2Q14240 407 aaKnown RBP28.2■■■□□ 2.1
GRIN1-209ENST00000460273 MTHFSP49914 203 aa28.19■■■□□ 2.1
GRIN1-209ENST00000460273 PARD3Q8TEW0 1356 aa28.19■■■□□ 2.1
GRIN1-209ENST00000460273 COL3A1P02461 1466 aaPredicted RBP28.19■■■□□ 2.1
GRIN1-209ENST00000460273 NCAPD2Q15021 1401 aa28.18■■■□□ 2.1
GRIN1-209ENST00000460273 FAM182BQ5T319 152 aa28.18■■■□□ 2.1
GRIN1-209ENST00000460273 KRT27Q7Z3Y8 459 aa28.18■■■□□ 2.1
GRIN1-209ENST00000460273 TNS2Q63HR2 1409 aa28.18■■■□□ 2.1
GRIN1-209ENST00000460273 EP400Q96L91 3159 aa28.17■■■□□ 2.1
GRIN1-209ENST00000460273 SOCS7O14512 581 aa28.15■■■□□ 2.1
GRIN1-209ENST00000460273 IL2RBP14784 551 aa28.14■■■□□ 2.1
GRIN1-209ENST00000460273 PPP2R1AP30153 589 aa28.14■■■□□ 2.1
GRIN1-209ENST00000460273 PKD1L3Q7Z443 1732 aa28.14■■■□□ 2.1
GRIN1-209ENST00000460273 EYA1Q99502 592 aa28.13■■■□□ 2.09
GRIN1-209ENST00000460273 DDB1Q16531 1140 aa28.12■■■□□ 2.09
GRIN1-209ENST00000460273 SBF2Q86WG5 1849 aa28.11■■■□□ 2.09
GRIN1-209ENST00000460273 OVOS2A0A0G2JMS6 1433 aa28.11■■■□□ 2.09
GRIN1-209ENST00000460273 CDCA7Q9BWT1 371 aaPredicted RBP28.11■■■□□ 2.09
GRIN1-209ENST00000460273 TNS1Q9HBL0 1735 aaKnown RBP28.11■■■□□ 2.09
GRIN1-209ENST00000460273 IGSF1Q8N6C5 1336 aa28.1■■■□□ 2.09
GRIN1-209ENST00000460273 PDE3BQ13370 1112 aa28.09■■■□□ 2.09
GRIN1-209ENST00000460273 IL13P35225 146 aa28.08■■■□□ 2.09
GRIN1-209ENST00000460273 MARCH10Q8NA82 808 aaPredicted RBP28.05■■■□□ 2.08
GRIN1-209ENST00000460273 UPF1Q92900 1129 aaKnown RBP eCLIP28.05■■■□□ 2.08
GRIN1-209ENST00000460273 DOT1LQ8TEK3 1739 aa28.04■■■□□ 2.08
GRIN1-209ENST00000460273 EXOC5O00471 708 aa28.04■■■□□ 2.08
GRIN1-209ENST00000460273 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
GRIN1-209ENST00000460273 RAPGEF4Q8WZA2 1011 aa28.04■■■□□ 2.08
GRIN1-209ENST00000460273 DIAPH1O60610 1272 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms