RNA–Protein interactions for RNA: ENST00000460123.1

GRIA3-201, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2

Gene GRIA3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-201ENST00000460123 RGPD2P0DJD1 1756 aa15.12■□□□□ 0.01
GRIA3-201ENST00000460123 AMPHP49418 695 aa15.11■□□□□ 0.01
GRIA3-201ENST00000460123 PDE3BQ13370 1112 aa15.11■□□□□ 0.01
GRIA3-201ENST00000460123 DDX17Q92841 729 aaKnown RBP15.11■□□□□ 0.01
GRIA3-201ENST00000460123 ABCC6O95255 1503 aa15.11■□□□□ 0.01
GRIA3-201ENST00000460123 SOS2Q07890 1332 aaPredicted RBP15.11■□□□□ 0.01
GRIA3-201ENST00000460123 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
GRIA3-201ENST00000460123 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
GRIA3-201ENST00000460123 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
GRIA3-201ENST00000460123 COL18A1P39060 1754 aa15.1■□□□□ 0.01
GRIA3-201ENST00000460123 APAF1O14727 1248 aa15.09■□□□□ 0.01
GRIA3-201ENST00000460123 FCHSD2O94868 740 aa15.09■□□□□ 0.01
GRIA3-201ENST00000460123 HOXC9P31274 260 aa15.09■□□□□ 0.01
GRIA3-201ENST00000460123 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
GRIA3-201ENST00000460123 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
GRIA3-201ENST00000460123 PHLPP1O60346 1717 aa15.09■□□□□ 0.01
GRIA3-201ENST00000460123 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0
GRIA3-201ENST00000460123 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
GRIA3-201ENST00000460123 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
GRIA3-201ENST00000460123 CAMTA1Q9Y6Y1 1673 aa15.08■□□□□ 0
GRIA3-201ENST00000460123 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
GRIA3-201ENST00000460123 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
GRIA3-201ENST00000460123 GCP02774 474 aa15.07■□□□□ 0
GRIA3-201ENST00000460123 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
GRIA3-201ENST00000460123 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
GRIA3-201ENST00000460123 COL22A1Q8NFW1 1626 aaPredicted RBP15.06■□□□□ 0
GRIA3-201ENST00000460123 NEFMP07197 916 aa15.06■□□□□ 0
GRIA3-201ENST00000460123 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
GRIA3-201ENST00000460123 IP6K1Q92551 441 aa15.06■□□□□ 0
GRIA3-201ENST00000460123 ZNF521Q96K83 1311 aa15.06■□□□□ 0
GRIA3-201ENST00000460123 ARHGEF25Q86VW2 580 aa15.05■□□□□ -0
GRIA3-201ENST00000460123 VIRMAQ69YN4 1812 aaKnown RBP15.04■□□□□ -0
GRIA3-201ENST00000460123 PRKAR2BP31323 418 aa15.04■□□□□ -0
GRIA3-201ENST00000460123 CCDC27Q2M243 656 aa15.04■□□□□ -0
GRIA3-201ENST00000460123 COL16A1Q07092 1604 aaPredicted RBP15.03■□□□□ -0
GRIA3-201ENST00000460123 IGSF1Q8N6C5 1336 aa15.03■□□□□ -0
GRIA3-201ENST00000460123 HMOX1P09601 288 aa15.03■□□□□ -0
GRIA3-201ENST00000460123 KDRP35968 1356 aa15.02■□□□□ -0
GRIA3-201ENST00000460123 TOM1O60784 492 aa15.02■□□□□ -0
GRIA3-201ENST00000460123 TMPOP42166 694 aaKnown RBP15.02■□□□□ -0
GRIA3-201ENST00000460123 LMO7Q8WWI1 1683 aa15.02□□□□□ -0.01
GRIA3-201ENST00000460123 CPDO75976 1380 aa15.01□□□□□ -0.01
GRIA3-201ENST00000460123 ZBTB7CA1YPR0 619 aa15.01□□□□□ -0.01
GRIA3-201ENST00000460123 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
GRIA3-201ENST00000460123 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
GRIA3-201ENST00000460123 PLEKHG5O94827 1062 aa15□□□□□ -0.01
GRIA3-201ENST00000460123 WWC1Q8IX03 1113 aa15□□□□□ -0.01
GRIA3-201ENST00000460123 EYA1Q99502 592 aa15□□□□□ -0.01
GRIA3-201ENST00000460123 RRP7AQ9Y3A4 280 aaKnown RBP15□□□□□ -0.01
GRIA3-201ENST00000460123 NCAPD2Q15021 1401 aa15□□□□□ -0.01
GRIA3-201ENST00000460123 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
GRIA3-201ENST00000460123 NFE2L2Q16236 605 aa14.99□□□□□ -0.01
GRIA3-201ENST00000460123 WDR63Q8IWG1 891 aa14.99□□□□□ -0.01
GRIA3-201ENST00000460123 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
GRIA3-201ENST00000460123 AEBP1Q8IUX7 1158 aa14.98□□□□□ -0.01
GRIA3-201ENST00000460123 CABLES1Q8TDN4 633 aa14.98□□□□□ -0.01
GRIA3-201ENST00000460123 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
GRIA3-201ENST00000460123 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
GRIA3-201ENST00000460123 E9PSI1 815 aa14.97□□□□□ -0.01
GRIA3-201ENST00000460123 SLFN5Q08AF3 891 aa14.97□□□□□ -0.01
GRIA3-201ENST00000460123 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
GRIA3-201ENST00000460123 COL14A1Q05707 1796 aaKnown RBP14.97□□□□□ -0.01
GRIA3-201ENST00000460123 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
GRIA3-201ENST00000460123 RIPK4P57078 832 aa14.96□□□□□ -0.01
GRIA3-201ENST00000460123 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
GRIA3-201ENST00000460123 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
GRIA3-201ENST00000460123 KCNA4P22459 653 aa14.95□□□□□ -0.02
GRIA3-201ENST00000460123 HAP1P54257 671 aaPredicted RBP14.95□□□□□ -0.02
GRIA3-201ENST00000460123 DUSP27Q5VZP5 1158 aa14.95□□□□□ -0.02
GRIA3-201ENST00000460123 TRMT2AQ8IZ69 625 aaKnown RBP14.95□□□□□ -0.02
GRIA3-201ENST00000460123 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
GRIA3-201ENST00000460123 ERBB3P21860 1342 aa14.94□□□□□ -0.02
GRIA3-201ENST00000460123 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
GRIA3-201ENST00000460123 LRRC37A3O60309 1634 aa14.94□□□□□ -0.02
GRIA3-201ENST00000460123 PARP4Q9UKK3 1724 aaKnown RBP14.94□□□□□ -0.02
GRIA3-201ENST00000460123 IL16Q14005 1332 aa14.93□□□□□ -0.02
GRIA3-201ENST00000460123 UBAP1LF5GYI3 381 aa14.93□□□□□ -0.02
GRIA3-201ENST00000460123 GAS2L2Q8NHY3 880 aa14.93□□□□□ -0.02
GRIA3-201ENST00000460123 AXIN2Q9Y2T1 843 aa14.93□□□□□ -0.02
GRIA3-201ENST00000460123 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
GRIA3-201ENST00000460123 PLCH1Q4KWH8 1693 aa14.93□□□□□ -0.02
GRIA3-201ENST00000460123 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
GRIA3-201ENST00000460123 CERKQ8TCT0 537 aa14.92□□□□□ -0.02
GRIA3-201ENST00000460123 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
GRIA3-201ENST00000460123 SUPT16HQ9Y5B9 1047 aaKnown RBP14.92□□□□□ -0.02
GRIA3-201ENST00000460123 PKD1L3Q7Z443 1732 aa14.92□□□□□ -0.02
GRIA3-201ENST00000460123 NEFLP07196 543 aa14.91□□□□□ -0.02
GRIA3-201ENST00000460123 PIP4K2BP78356 416 aa14.91□□□□□ -0.02
GRIA3-201ENST00000460123 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
GRIA3-201ENST00000460123 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
GRIA3-201ENST00000460123 PRDM11Q9NQV5 511 aa14.91□□□□□ -0.02
GRIA3-201ENST00000460123 WNK3Q9BYP7 1800 aa14.91□□□□□ -0.02
GRIA3-201ENST00000460123 COL5A2P05997 1499 aaPredicted RBP14.9□□□□□ -0.02
GRIA3-201ENST00000460123 PLEKHG2Q9H7P9 1386 aa14.9□□□□□ -0.02
GRIA3-201ENST00000460123 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
GRIA3-201ENST00000460123 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
GRIA3-201ENST00000460123 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
GRIA3-201ENST00000460123 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
GRIA3-201ENST00000460123 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
GRIA3-201ENST00000460123 NRAPQ86VF7 1730 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms