RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
THBS3-204ENST00000460050 USP35Q9P2H5 1018 aa19.85■□□□□ 0.77
THBS3-204ENST00000460050 RGPD5Q99666 1765 aa19.85■□□□□ 0.77
THBS3-204ENST00000460050 LTN1O94822 1766 aa19.83■□□□□ 0.77
THBS3-204ENST00000460050 ABCC6O95255 1503 aa19.83■□□□□ 0.77
THBS3-204ENST00000460050 KRT27Q7Z3Y8 459 aa19.83■□□□□ 0.77
THBS3-204ENST00000460050 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
THBS3-204ENST00000460050 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
THBS3-204ENST00000460050 CRB1P82279 1406 aa19.82■□□□□ 0.76
THBS3-204ENST00000460050 TCP11L2Q8N4U5 519 aa19.81■□□□□ 0.76
THBS3-204ENST00000460050 COG3Q96JB2 828 aa19.81■□□□□ 0.76
THBS3-204ENST00000460050 BARGINQ6ZT62 677 aa19.8■□□□□ 0.76
THBS3-204ENST00000460050 KIF20BQ96Q89 1820 aa19.8■□□□□ 0.76
THBS3-204ENST00000460050 WDR17Q8IZU2 1322 aa19.79■□□□□ 0.76
THBS3-204ENST00000460050 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
THBS3-204ENST00000460050 FYB1O15117 783 aa19.78■□□□□ 0.76
THBS3-204ENST00000460050 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
THBS3-204ENST00000460050 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
THBS3-204ENST00000460050 GGNBP2Q9H3C7 697 aa19.78■□□□□ 0.76
THBS3-204ENST00000460050 THRAP3Q9Y2W1 955 aaKnown RBP19.78■□□□□ 0.76
THBS3-204ENST00000460050 CSB-PGBD3P0DP91 1061 aa19.76■□□□□ 0.75
THBS3-204ENST00000460050 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
THBS3-204ENST00000460050 PARP4Q9UKK3 1724 aaKnown RBP19.75■□□□□ 0.75
THBS3-204ENST00000460050 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
THBS3-204ENST00000460050 WNK3Q9BYP7 1800 aa19.74■□□□□ 0.75
THBS3-204ENST00000460050 FAM182BQ5T319 152 aa19.74■□□□□ 0.75
THBS3-204ENST00000460050 C11orf95C9JLR9 678 aaPredicted RBP19.73■□□□□ 0.75
THBS3-204ENST00000460050 FBLN1P23142 703 aa19.73■□□□□ 0.75
THBS3-204ENST00000460050 CARD10Q9BWT7 1032 aa19.73■□□□□ 0.75
THBS3-204ENST00000460050 ERBB3P21860 1342 aa19.73■□□□□ 0.75
THBS3-204ENST00000460050 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
THBS3-204ENST00000460050 ANKRD24Q8TF21 1146 aa19.71■□□□□ 0.75
THBS3-204ENST00000460050 IP6K1Q92551 441 aa19.71■□□□□ 0.75
THBS3-204ENST00000460050 LRRC37A3O60309 1634 aa19.7■□□□□ 0.74
THBS3-204ENST00000460050 PDE3BQ13370 1112 aa19.7■□□□□ 0.74
THBS3-204ENST00000460050 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
THBS3-204ENST00000460050 CCDC7Q96M83 1385 aa19.7■□□□□ 0.74
THBS3-204ENST00000460050 HOXC9P31274 260 aa19.68■□□□□ 0.74
THBS3-204ENST00000460050 AMPHP49418 695 aa19.68■□□□□ 0.74
THBS3-204ENST00000460050 SF3B2Q13435 895 aaKnown RBP19.68■□□□□ 0.74
THBS3-204ENST00000460050 RRS1Q15050 365 aaKnown RBP19.68■□□□□ 0.74
THBS3-204ENST00000460050 PANK3Q9H999 370 aa19.68■□□□□ 0.74
THBS3-204ENST00000460050 NLRP2Q9NX02 1062 aa19.68■□□□□ 0.74
THBS3-204ENST00000460050 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
THBS3-204ENST00000460050 DISP2A7MBM2 1401 aa19.68■□□□□ 0.74
THBS3-204ENST00000460050 CDCA7Q9BWT1 371 aaPredicted RBP19.67■□□□□ 0.74
THBS3-204ENST00000460050 FAM208AQ9UK61 1670 aaKnown RBP19.67■□□□□ 0.74
THBS3-204ENST00000460050 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
THBS3-204ENST00000460050 RTL1A6NKG5 1358 aa19.67■□□□□ 0.74
THBS3-204ENST00000460050 DDB1Q16531 1140 aa19.66■□□□□ 0.74
THBS3-204ENST00000460050 FAM196AQ6ZSG2 479 aa19.66■□□□□ 0.74
THBS3-204ENST00000460050 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
THBS3-204ENST00000460050 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
THBS3-204ENST00000460050 DEFB132Q7Z7B7 95 aa19.65■□□□□ 0.74
THBS3-204ENST00000460050 PEAK1Q9H792 1746 aa19.64■□□□□ 0.73
THBS3-204ENST00000460050 TNS1Q9HBL0 1735 aaKnown RBP19.64■□□□□ 0.73
THBS3-204ENST00000460050 OVOS2A0A0G2JMS6 1433 aa19.62■□□□□ 0.73
THBS3-204ENST00000460050 TRIM37O94972 964 aa19.62■□□□□ 0.73
THBS3-204ENST00000460050 RGPD2P0DJD1 1756 aa19.62■□□□□ 0.73
THBS3-204ENST00000460050 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
THBS3-204ENST00000460050 FLT4P35916 1363 aa19.61■□□□□ 0.73
THBS3-204ENST00000460050 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
THBS3-204ENST00000460050 BAG6P46379 1132 aa19.61■□□□□ 0.73
THBS3-204ENST00000460050 IL2RBP14784 551 aa19.6■□□□□ 0.73
THBS3-204ENST00000460050 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
THBS3-204ENST00000460050 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
THBS3-204ENST00000460050 INSRP06213 1382 aa19.59■□□□□ 0.73
THBS3-204ENST00000460050 EXOC5O00471 708 aa19.59■□□□□ 0.73
THBS3-204ENST00000460050 SMG6Q86US8 1419 aaKnown RBP19.59■□□□□ 0.73
THBS3-204ENST00000460050 NSD2O96028 1365 aa19.58■□□□□ 0.73
THBS3-204ENST00000460050 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.72
THBS3-204ENST00000460050 MARCH10Q8NA82 808 aaPredicted RBP19.58■□□□□ 0.72
THBS3-204ENST00000460050 SBF2Q86WG5 1849 aa19.58■□□□□ 0.72
THBS3-204ENST00000460050 KNSTRNQ9Y448 316 aa19.57■□□□□ 0.72
THBS3-204ENST00000460050 PPM1GO15355 546 aaPredicted RBP19.56■□□□□ 0.72
THBS3-204ENST00000460050 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
THBS3-204ENST00000460050 EN1Q05925 392 aaPredicted RBP19.56■□□□□ 0.72
THBS3-204ENST00000460050 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
THBS3-204ENST00000460050 BCL9O00512 1426 aa19.54■□□□□ 0.72
THBS3-204ENST00000460050 APBA3O96018 575 aa19.54■□□□□ 0.72
THBS3-204ENST00000460050 NBPF6Q5VWK0 638 aa19.54■□□□□ 0.72
THBS3-204ENST00000460050 NBPF4Q96M43 638 aa19.54■□□□□ 0.72
THBS3-204ENST00000460050 POLKQ9UBT6 870 aa19.54■□□□□ 0.72
THBS3-204ENST00000460050 USHBP1Q8N6Y0 703 aa19.53■□□□□ 0.72
THBS3-204ENST00000460050 MEGF6O75095 1541 aa19.52■□□□□ 0.72
THBS3-204ENST00000460050 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
THBS3-204ENST00000460050 AMER1Q5JTC6 1135 aaPredicted RBP19.51■□□□□ 0.71
THBS3-204ENST00000460050 EZH2Q15910 746 aaKnown RBP19.5■□□□□ 0.71
THBS3-204ENST00000460050 CAMKK2Q96RR4 588 aa19.5■□□□□ 0.71
THBS3-204ENST00000460050 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
THBS3-204ENST00000460050 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
THBS3-204ENST00000460050 PARD3Q8TEW0 1356 aa19.48■□□□□ 0.71
THBS3-204ENST00000460050 PTF1AQ7RTS3 328 aa19.48■□□□□ 0.71
THBS3-204ENST00000460050 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
THBS3-204ENST00000460050 BCL11BQ9C0K0 894 aaPredicted RBP19.48■□□□□ 0.71
THBS3-204ENST00000460050 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
THBS3-204ENST00000460050 NHSQ6T4R5 1651 aa19.47■□□□□ 0.71
THBS3-204ENST00000460050 RREB1Q92766 1687 aa19.47■□□□□ 0.71
THBS3-204ENST00000460050 NCAPD2Q15021 1401 aa19.46■□□□□ 0.71
THBS3-204ENST00000460050 ZCRB1Q8TBF4 217 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms