RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 MINK1Q8N4C8 1332 aaPredicted RBP20.42■□□□□ 0.86
PCOLCE-202ENST00000460002 AATKQ6ZMQ8 1374 aa20.42■□□□□ 0.86
PCOLCE-202ENST00000460002 WASLO00401 505 aaPredicted RBP20.39■□□□□ 0.85
PCOLCE-202ENST00000460002 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
PCOLCE-202ENST00000460002 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
PCOLCE-202ENST00000460002 COL13A1Q5TAT6 717 aaPredicted RBP20.37■□□□□ 0.85
PCOLCE-202ENST00000460002 USP19O94966 1318 aa20.36■□□□□ 0.85
PCOLCE-202ENST00000460002 ZNF827Q17R98 1081 aa20.36■□□□□ 0.85
PCOLCE-202ENST00000460002 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
PCOLCE-202ENST00000460002 ZNF526Q8TF50 670 aaPredicted RBP20.35■□□□□ 0.85
PCOLCE-202ENST00000460002 ADCY9O60503 1353 aa20.34■□□□□ 0.85
PCOLCE-202ENST00000460002 POLD1P28340 1107 aa20.33■□□□□ 0.85
PCOLCE-202ENST00000460002 TRAK1Q9UPV9 953 aa20.33■□□□□ 0.85
PCOLCE-202ENST00000460002 GCP02774 474 aa20.32■□□□□ 0.84
PCOLCE-202ENST00000460002 PRELPP51888 382 aa20.31■□□□□ 0.84
PCOLCE-202ENST00000460002 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
PCOLCE-202ENST00000460002 NUDT16Q96DE0 195 aaKnown RBP20.31■□□□□ 0.84
PCOLCE-202ENST00000460002 TOPAZ1Q8N9V7 1692 aa20.31■□□□□ 0.84
PCOLCE-202ENST00000460002 APLP1P51693 650 aa20.3■□□□□ 0.84
PCOLCE-202ENST00000460002 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
PCOLCE-202ENST00000460002 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
PCOLCE-202ENST00000460002 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
PCOLCE-202ENST00000460002 SLC16A10Q8TF71 515 aa20.29■□□□□ 0.84
PCOLCE-202ENST00000460002 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
PCOLCE-202ENST00000460002 ADGRB1O14514 1584 aa20.29■□□□□ 0.84
PCOLCE-202ENST00000460002 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
PCOLCE-202ENST00000460002 ACEP12821 1306 aa20.27■□□□□ 0.84
PCOLCE-202ENST00000460002 ITSN1Q15811 1721 aa20.27■□□□□ 0.84
PCOLCE-202ENST00000460002 ZBTB7CA1YPR0 619 aa20.27■□□□□ 0.84
PCOLCE-202ENST00000460002 KIF3CO14782 793 aa20.27■□□□□ 0.84
PCOLCE-202ENST00000460002 SLC34A2O95436 690 aa20.27■□□□□ 0.84
PCOLCE-202ENST00000460002 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
PCOLCE-202ENST00000460002 CDCA7Q9BWT1 371 aaPredicted RBP20.26■□□□□ 0.83
PCOLCE-202ENST00000460002 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
PCOLCE-202ENST00000460002 PNPLA7Q6ZV29 1317 aa20.25■□□□□ 0.83
PCOLCE-202ENST00000460002 NHSQ6T4R5 1651 aa20.24■□□□□ 0.83
PCOLCE-202ENST00000460002 NLRP13Q86W25 1043 aa20.24■□□□□ 0.83
PCOLCE-202ENST00000460002 TNS4Q8IZW8 715 aa20.24■□□□□ 0.83
PCOLCE-202ENST00000460002 ACSBG1Q96GR2 724 aa20.23■□□□□ 0.83
PCOLCE-202ENST00000460002 WDR17Q8IZU2 1322 aa20.23■□□□□ 0.83
PCOLCE-202ENST00000460002 EXOC5O00471 708 aa20.21■□□□□ 0.83
PCOLCE-202ENST00000460002 AXIN2Q9Y2T1 843 aa20.21■□□□□ 0.83
PCOLCE-202ENST00000460002 BRD4O60885 1362 aaPredicted RBP20.19■□□□□ 0.82
PCOLCE-202ENST00000460002 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
PCOLCE-202ENST00000460002 PLEKHG3A1L390 1219 aa20.18■□□□□ 0.82
PCOLCE-202ENST00000460002 COL18A1P39060 1754 aa20.18■□□□□ 0.82
PCOLCE-202ENST00000460002 TNS2Q63HR2 1409 aa20.18■□□□□ 0.82
PCOLCE-202ENST00000460002 USP6P35125 1406 aa20.17■□□□□ 0.82
PCOLCE-202ENST00000460002 JMYQ8N9B5 988 aa20.16■□□□□ 0.82
PCOLCE-202ENST00000460002 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
PCOLCE-202ENST00000460002 CDK19Q9BWU1 502 aa20.16■□□□□ 0.82
PCOLCE-202ENST00000460002 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
PCOLCE-202ENST00000460002 BTAF1O14981 1849 aa20.14■□□□□ 0.81
PCOLCE-202ENST00000460002 ARHGEF28Q8N1W1 1705 aaKnown RBP20.14■□□□□ 0.81
PCOLCE-202ENST00000460002 SLIT3O75094 1523 aa20.14■□□□□ 0.81
PCOLCE-202ENST00000460002 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
PCOLCE-202ENST00000460002 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
PCOLCE-202ENST00000460002 KLRG1Q96E93 195 aa20.13■□□□□ 0.81
PCOLCE-202ENST00000460002 TUBGCP6Q96RT7 1819 aa20.12■□□□□ 0.81
PCOLCE-202ENST00000460002 HTRA3P83110 453 aa20.12■□□□□ 0.81
PCOLCE-202ENST00000460002 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
PCOLCE-202ENST00000460002 TOMM70O94826 608 aa20.11■□□□□ 0.81
PCOLCE-202ENST00000460002 CSB-PGBD3P0DP91 1061 aa20.1■□□□□ 0.81
PCOLCE-202ENST00000460002 KCNQ4P56696 695 aa20.1■□□□□ 0.81
PCOLCE-202ENST00000460002 NLRP6P59044 892 aa20.1■□□□□ 0.81
PCOLCE-202ENST00000460002 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
PCOLCE-202ENST00000460002 ABCC6O95255 1503 aa20.1■□□□□ 0.81
PCOLCE-202ENST00000460002 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
PCOLCE-202ENST00000460002 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
PCOLCE-202ENST00000460002 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
PCOLCE-202ENST00000460002 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.8
PCOLCE-202ENST00000460002 PPIP5K1Q6PFW1 1433 aa20.08■□□□□ 0.8
PCOLCE-202ENST00000460002 CCDC7Q96M83 1385 aa20.08■□□□□ 0.8
PCOLCE-202ENST00000460002 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
PCOLCE-202ENST00000460002 ARHGEF25Q86VW2 580 aa20.06■□□□□ 0.8
PCOLCE-202ENST00000460002 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
PCOLCE-202ENST00000460002 WWC3Q9ULE0 1092 aa20.05■□□□□ 0.8
PCOLCE-202ENST00000460002 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
PCOLCE-202ENST00000460002 MSH5O43196 834 aa20.03■□□□□ 0.8
PCOLCE-202ENST00000460002 NMRK2Q9NPI5 230 aa20■□□□□ 0.79
PCOLCE-202ENST00000460002 PCNTO95613 3336 aa20■□□□□ 0.79
PCOLCE-202ENST00000460002 IGSF1Q8N6C5 1336 aa20■□□□□ 0.79
PCOLCE-202ENST00000460002 PIK3C2AO00443 1686 aa19.99■□□□□ 0.79
PCOLCE-202ENST00000460002 KDM2AQ9Y2K7 1162 aa19.98■□□□□ 0.79
PCOLCE-202ENST00000460002 SOX12O15370 315 aa19.97■□□□□ 0.79
PCOLCE-202ENST00000460002 RBM46Q8TBY0 533 aaKnown RBP19.97■□□□□ 0.79
PCOLCE-202ENST00000460002 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
PCOLCE-202ENST00000460002 IL2RBP14784 551 aa19.96■□□□□ 0.79
PCOLCE-202ENST00000460002 CICQ96RK0 1608 aaPredicted RBP19.94■□□□□ 0.78
PCOLCE-202ENST00000460002 KCNH5Q8NCM2 988 aa19.94■□□□□ 0.78
PCOLCE-202ENST00000460002 HSPA1AP0DMV8 641 aaKnown RBP19.93■□□□□ 0.78
PCOLCE-202ENST00000460002 HSPA1BP0DMV9 641 aaKnown RBP19.93■□□□□ 0.78
PCOLCE-202ENST00000460002 SRPK2P78362 688 aaKnown RBP19.93■□□□□ 0.78
PCOLCE-202ENST00000460002 CABP2Q9NPB3 220 aa19.93■□□□□ 0.78
PCOLCE-202ENST00000460002 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
PCOLCE-202ENST00000460002 NLRP2Q9NX02 1062 aa19.92■□□□□ 0.78
PCOLCE-202ENST00000460002 CCNL1Q9UK58 526 aaPredicted RBP19.92■□□□□ 0.78
PCOLCE-202ENST00000460002 LY75O60449 1722 aa19.92■□□□□ 0.78
PCOLCE-202ENST00000460002 KAT6BQ8WYB5 2073 aa19.91■□□□□ 0.78
PCOLCE-202ENST00000460002 FSTL1Q12841 308 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms