RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
NEDD9-205ENST00000459670 COL14A1Q05707 1796 aaKnown RBP13.98□□□□□ -0.17
NEDD9-205ENST00000459670 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
NEDD9-205ENST00000459670 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
NEDD9-205ENST00000459670 GCP02774 474 aa13.97□□□□□ -0.17
NEDD9-205ENST00000459670 EIF4A2Q14240 407 aaKnown RBP13.97□□□□□ -0.17
NEDD9-205ENST00000459670 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
NEDD9-205ENST00000459670 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.17
NEDD9-205ENST00000459670 SHANK3Q9BYB0 1731 aa13.96□□□□□ -0.17
NEDD9-205ENST00000459670 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
NEDD9-205ENST00000459670 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
NEDD9-205ENST00000459670 HOXC9P31274 260 aa13.96□□□□□ -0.17
NEDD9-205ENST00000459670 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
NEDD9-205ENST00000459670 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
NEDD9-205ENST00000459670 KCNH5Q8NCM2 988 aa13.96□□□□□ -0.17
NEDD9-205ENST00000459670 NWD2Q9ULI1 1742 aa13.95□□□□□ -0.18
NEDD9-205ENST00000459670 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
NEDD9-205ENST00000459670 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
NEDD9-205ENST00000459670 WDR43Q15061 677 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEDD9-205ENST00000459670 IP6K1Q92551 441 aa13.94□□□□□ -0.18
NEDD9-205ENST00000459670 PARP4Q9UKK3 1724 aaKnown RBP13.92□□□□□ -0.18
NEDD9-205ENST00000459670 COL5A2P05997 1499 aaPredicted RBP13.92□□□□□ -0.18
NEDD9-205ENST00000459670 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
NEDD9-205ENST00000459670 CERKQ8TCT0 537 aa13.91□□□□□ -0.18
NEDD9-205ENST00000459670 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
NEDD9-205ENST00000459670 KIAA0232Q92628 1395 aa13.91□□□□□ -0.18
NEDD9-205ENST00000459670 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
NEDD9-205ENST00000459670 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
NEDD9-205ENST00000459670 FCHSD2O94868 740 aa13.9□□□□□ -0.18
NEDD9-205ENST00000459670 ERBB3P21860 1342 aa13.9□□□□□ -0.19
NEDD9-205ENST00000459670 SOX12O15370 315 aa13.89□□□□□ -0.19
NEDD9-205ENST00000459670 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
NEDD9-205ENST00000459670 NGEFQ8N5V2 710 aa13.89□□□□□ -0.19
NEDD9-205ENST00000459670 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
NEDD9-205ENST00000459670 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
NEDD9-205ENST00000459670 TOM1O60784 492 aa13.88□□□□□ -0.19
NEDD9-205ENST00000459670 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
NEDD9-205ENST00000459670 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
NEDD9-205ENST00000459670 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
NEDD9-205ENST00000459670 AEBP1Q8IUX7 1158 aa13.88□□□□□ -0.19
NEDD9-205ENST00000459670 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
NEDD9-205ENST00000459670 EYA1Q99502 592 aa13.88□□□□□ -0.19
NEDD9-205ENST00000459670 APAF1O14727 1248 aa13.87□□□□□ -0.19
NEDD9-205ENST00000459670 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
NEDD9-205ENST00000459670 AMPHP49418 695 aa13.87□□□□□ -0.19
NEDD9-205ENST00000459670 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
NEDD9-205ENST00000459670 TRMT2AQ8IZ69 625 aaKnown RBP13.86□□□□□ -0.19
NEDD9-205ENST00000459670 TCP11L2Q8N4U5 519 aa13.86□□□□□ -0.19
NEDD9-205ENST00000459670 LRRC59Q96AG4 307 aaKnown RBP13.86□□□□□ -0.19
NEDD9-205ENST00000459670 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
NEDD9-205ENST00000459670 CENPBP07199 599 aaPredicted RBP13.85□□□□□ -0.19
NEDD9-205ENST00000459670 PRKAR2BP31323 418 aa13.85□□□□□ -0.19
NEDD9-205ENST00000459670 PHACTR3Q96KR7 559 aa13.85□□□□□ -0.19
NEDD9-205ENST00000459670 KDM3BQ7LBC6 1761 aa13.85□□□□□ -0.19
NEDD9-205ENST00000459670 LRP6O75581 1613 aa13.85□□□□□ -0.19
NEDD9-205ENST00000459670 MEGF6O75095 1541 aa13.85□□□□□ -0.19
NEDD9-205ENST00000459670 SLIT2O94813 1529 aa13.85□□□□□ -0.19
NEDD9-205ENST00000459670 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
NEDD9-205ENST00000459670 UBAP1LF5GYI3 381 aa13.83□□□□□ -0.2
NEDD9-205ENST00000459670 HMOX1P09601 288 aa13.83□□□□□ -0.2
NEDD9-205ENST00000459670 TMPOP42166 694 aaKnown RBP13.83□□□□□ -0.2
NEDD9-205ENST00000459670 PDE3BQ13370 1112 aa13.83□□□□□ -0.2
NEDD9-205ENST00000459670 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
NEDD9-205ENST00000459670 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
NEDD9-205ENST00000459670 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
NEDD9-205ENST00000459670 SENP3-EIF4A1A0A087X0R7 540 aa13.82□□□□□ -0.2
NEDD9-205ENST00000459670 ZC3H6P61129 1189 aaKnown RBP13.82□□□□□ -0.2
NEDD9-205ENST00000459670 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
NEDD9-205ENST00000459670 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
NEDD9-205ENST00000459670 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
NEDD9-205ENST00000459670 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
NEDD9-205ENST00000459670 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
NEDD9-205ENST00000459670 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
NEDD9-205ENST00000459670 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
NEDD9-205ENST00000459670 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
NEDD9-205ENST00000459670 MRC1P22897 1456 aa13.8□□□□□ -0.2
NEDD9-205ENST00000459670 DUSP27Q5VZP5 1158 aa13.8□□□□□ -0.2
NEDD9-205ENST00000459670 JCADQ9P266 1359 aa13.8□□□□□ -0.2
NEDD9-205ENST00000459670 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
NEDD9-205ENST00000459670 GLI3P10071 1580 aa13.79□□□□□ -0.2
NEDD9-205ENST00000459670 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
NEDD9-205ENST00000459670 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
NEDD9-205ENST00000459670 CHRNA2Q15822 529 aa13.79□□□□□ -0.2
NEDD9-205ENST00000459670 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
NEDD9-205ENST00000459670 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
NEDD9-205ENST00000459670 WDR17Q8IZU2 1322 aa13.79□□□□□ -0.2
NEDD9-205ENST00000459670 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
NEDD9-205ENST00000459670 IL16Q14005 1332 aa13.78□□□□□ -0.2
NEDD9-205ENST00000459670 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
NEDD9-205ENST00000459670 CRB1P82279 1406 aa13.78□□□□□ -0.2
NEDD9-205ENST00000459670 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
NEDD9-205ENST00000459670 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
NEDD9-205ENST00000459670 WDR63Q8IWG1 891 aa13.77□□□□□ -0.21
NEDD9-205ENST00000459670 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.21
NEDD9-205ENST00000459670 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.21
NEDD9-205ENST00000459670 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
NEDD9-205ENST00000459670 CEMIPQ8WUJ3 1361 aa13.76□□□□□ -0.21
NEDD9-205ENST00000459670 USHBP1Q8N6Y0 703 aa13.76□□□□□ -0.21
NEDD9-205ENST00000459670 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
NEDD9-205ENST00000459670 ZNF853P0CG23 659 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms