RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
HDLBP-227ENST00000458564 CDCA7Q9BWT1 371 aaPredicted RBP15.01□□□□□ -0.01
HDLBP-227ENST00000458564 TTC21BQ7Z4L5 1316 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 TOM1L2Q6ZVM7 507 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 KCNH5Q8NCM2 988 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 SBF2Q86WG5 1849 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 NFAT5O94916 1531 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 AKAP12Q02952 1782 aa15□□□□□ -0.01
HDLBP-227ENST00000458564 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
HDLBP-227ENST00000458564 SPON1Q9HCB6 807 aa14.99□□□□□ -0.01
HDLBP-227ENST00000458564 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
HDLBP-227ENST00000458564 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
HDLBP-227ENST00000458564 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
HDLBP-227ENST00000458564 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
HDLBP-227ENST00000458564 KCNQ2O43526 872 aa14.97□□□□□ -0.01
HDLBP-227ENST00000458564 CARD10Q9BWT7 1032 aa14.97□□□□□ -0.01
HDLBP-227ENST00000458564 MARCH10Q8NA82 808 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-227ENST00000458564 ANO8Q9HCE9 1232 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-227ENST00000458564 CCDC7Q96M83 1385 aa14.96□□□□□ -0.02
HDLBP-227ENST00000458564 CASZ1Q86V15 1759 aa14.96□□□□□ -0.02
HDLBP-227ENST00000458564 USP54Q70EL1 1684 aa14.95□□□□□ -0.02
HDLBP-227ENST00000458564 KTN1Q86UP2 1357 aaKnown RBP14.95□□□□□ -0.02
HDLBP-227ENST00000458564 MON2Q7Z3U7 1717 aa14.95□□□□□ -0.02
HDLBP-227ENST00000458564 TNS2Q63HR2 1409 aa14.94□□□□□ -0.02
HDLBP-227ENST00000458564 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
HDLBP-227ENST00000458564 USP31Q70CQ4 1352 aa14.94□□□□□ -0.02
HDLBP-227ENST00000458564 PROM2Q8N271 834 aa14.93□□□□□ -0.02
HDLBP-227ENST00000458564 SIN3AQ96ST3 1273 aa14.93□□□□□ -0.02
HDLBP-227ENST00000458564 PPP1R1BQ9UD71 204 aaPredicted RBP14.93□□□□□ -0.02
HDLBP-227ENST00000458564 UTRNP46939 3433 aa14.93□□□□□ -0.02
HDLBP-227ENST00000458564 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
HDLBP-227ENST00000458564 CSB-PGBD3P0DP91 1061 aa14.92□□□□□ -0.02
HDLBP-227ENST00000458564 CD163L1Q9NR16 1453 aa14.92□□□□□ -0.02
HDLBP-227ENST00000458564 ERBB3P21860 1342 aa14.91□□□□□ -0.02
HDLBP-227ENST00000458564 EXOC5O00471 708 aa14.9□□□□□ -0.02
HDLBP-227ENST00000458564 SOX12O15370 315 aa14.9□□□□□ -0.02
HDLBP-227ENST00000458564 YY1P25490 414 aa14.9□□□□□ -0.02
HDLBP-227ENST00000458564 TXNRD1Q16881 649 aa14.89□□□□□ -0.03
HDLBP-227ENST00000458564 NHSQ6T4R5 1651 aa14.89□□□□□ -0.03
HDLBP-227ENST00000458564 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
HDLBP-227ENST00000458564 PTGER2P43116 358 aa14.87□□□□□ -0.03
HDLBP-227ENST00000458564 NEUROD1Q13562 356 aa14.87□□□□□ -0.03
HDLBP-227ENST00000458564 PDGFDQ9GZP0 370 aaPredicted RBP14.87□□□□□ -0.03
HDLBP-227ENST00000458564 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
HDLBP-227ENST00000458564 SLC15A2Q16348 729 aa14.86□□□□□ -0.03
HDLBP-227ENST00000458564 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
HDLBP-227ENST00000458564 PAPPAQ13219 1627 aa14.85□□□□□ -0.03
HDLBP-227ENST00000458564 MYOM1P52179 1685 aa14.85□□□□□ -0.03
HDLBP-227ENST00000458564 NME9Q86XW9 330 aa14.85□□□□□ -0.03
HDLBP-227ENST00000458564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.85□□□□□ -0.03
HDLBP-227ENST00000458564 PUS7Q96PZ0 661 aaKnown RBP14.85□□□□□ -0.03
HDLBP-227ENST00000458564 LTN1O94822 1766 aa14.85□□□□□ -0.03
HDLBP-227ENST00000458564 ZBTB7AO95365 584 aa14.84□□□□□ -0.03
HDLBP-227ENST00000458564 IL2RBP14784 551 aa14.84□□□□□ -0.03
HDLBP-227ENST00000458564 CARD11Q9BXL7 1154 aa14.84□□□□□ -0.03
HDLBP-227ENST00000458564 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
HDLBP-227ENST00000458564 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
HDLBP-227ENST00000458564 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
HDLBP-227ENST00000458564 MTFR1LQ9H019 292 aa14.83□□□□□ -0.04
HDLBP-227ENST00000458564 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.04
HDLBP-227ENST00000458564 ANKRD24Q8TF21 1146 aa14.82□□□□□ -0.04
HDLBP-227ENST00000458564 SLC12A5Q9H2X9 1139 aa14.82□□□□□ -0.04
HDLBP-227ENST00000458564 TERF2IPQ9NYB0 399 aa14.82□□□□□ -0.04
HDLBP-227ENST00000458564 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
HDLBP-227ENST00000458564 FAM208AQ9UK61 1670 aaKnown RBP14.81□□□□□ -0.04
HDLBP-227ENST00000458564 BTAF1O14981 1849 aa14.8□□□□□ -0.04
HDLBP-227ENST00000458564 ACSBG1Q96GR2 724 aa14.8□□□□□ -0.04
HDLBP-227ENST00000458564 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
HDLBP-227ENST00000458564 MAP3K5Q99683 1374 aa14.8□□□□□ -0.04
HDLBP-227ENST00000458564 IP6K1Q92551 441 aa14.78□□□□□ -0.04
HDLBP-227ENST00000458564 SYT17Q9BSW7 474 aa14.78□□□□□ -0.04
HDLBP-227ENST00000458564 FHDC1Q9C0D6 1143 aaPredicted RBP14.78□□□□□ -0.04
HDLBP-227ENST00000458564 TONSLQ96HA7 1378 aa14.77□□□□□ -0.04
HDLBP-227ENST00000458564 TESK2Q96S53 571 aa14.77□□□□□ -0.05
HDLBP-227ENST00000458564 GOLGB1Q14789 3259 aaKnown RBP14.76□□□□□ -0.05
HDLBP-227ENST00000458564 ZNF827Q17R98 1081 aa14.76□□□□□ -0.05
HDLBP-227ENST00000458564 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
HDLBP-227ENST00000458564 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
HDLBP-227ENST00000458564 SLC27A3Q5K4L6 730 aa14.75□□□□□ -0.05
HDLBP-227ENST00000458564 QSER1Q2KHR3 1735 aa14.75□□□□□ -0.05
HDLBP-227ENST00000458564 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
HDLBP-227ENST00000458564 ARXQ96QS3 562 aa14.74□□□□□ -0.05
HDLBP-227ENST00000458564 RTL1A6NKG5 1358 aa14.73□□□□□ -0.05
HDLBP-227ENST00000458564 ANKRD36BQ8N2N9 1353 aa14.73□□□□□ -0.05
HDLBP-227ENST00000458564 MAP3K19Q56UN5 1328 aa14.73□□□□□ -0.05
HDLBP-227ENST00000458564 SLC16A10Q8TF71 515 aa14.73□□□□□ -0.05
HDLBP-227ENST00000458564 COL24A1Q17RW2 1714 aa14.72□□□□□ -0.05
HDLBP-227ENST00000458564 HOXC9P31274 260 aa14.72□□□□□ -0.05
HDLBP-227ENST00000458564 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
HDLBP-227ENST00000458564 COG3Q96JB2 828 aa14.72□□□□□ -0.05
HDLBP-227ENST00000458564 NSD2O96028 1365 aa14.72□□□□□ -0.05
HDLBP-227ENST00000458564 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
HDLBP-227ENST00000458564 DDX54Q8TDD1 881 aaKnown RBP14.71□□□□□ -0.05
HDLBP-227ENST00000458564 SHANK3Q9BYB0 1731 aa14.71□□□□□ -0.05
HDLBP-227ENST00000458564 MEGF6O75095 1541 aa14.71□□□□□ -0.06
HDLBP-227ENST00000458564 DOT1LQ8TEK3 1739 aa14.7□□□□□ -0.06
HDLBP-227ENST00000458564 LTV1Q96GA3 475 aaPredicted RBP14.7□□□□□ -0.06
HDLBP-227ENST00000458564 LY75O60449 1722 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms