RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 ZNF385CQ66K41 422 aaPredicted RBP8.61□□□□□ -1.03
UBDP1-202ENST00000457888 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
UBDP1-202ENST00000457888 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
UBDP1-202ENST00000457888 QPCTQ16769 361 aa8.6□□□□□ -1.03
UBDP1-202ENST00000457888 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
UBDP1-202ENST00000457888 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
UBDP1-202ENST00000457888 SPINT1O43278 529 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 LILRB3O75022 631 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 CBLBQ13191 982 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 TUSC1Q2TAM9 212 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 RNFT1Q5M7Z0 435 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
UBDP1-202ENST00000457888 Q6ZVU0 165 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
UBDP1-202ENST00000457888 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
UBDP1-202ENST00000457888 TRIM66O15016 1216 aa8.58□□□□□ -1.04
UBDP1-202ENST00000457888 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
UBDP1-202ENST00000457888 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.04
UBDP1-202ENST00000457888 SLC35F4A4IF30 521 aa8.57□□□□□ -1.04
UBDP1-202ENST00000457888 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
UBDP1-202ENST00000457888 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
UBDP1-202ENST00000457888 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
UBDP1-202ENST00000457888 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
UBDP1-202ENST00000457888 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
UBDP1-202ENST00000457888 ITGA6P23229 1130 aa8.55□□□□□ -1.04
UBDP1-202ENST00000457888 IRS1P35568 1242 aa8.55□□□□□ -1.04
UBDP1-202ENST00000457888 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
UBDP1-202ENST00000457888 CDC14CA4D256 554 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
UBDP1-202ENST00000457888 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 AK7Q96M32 723 aa8.54□□□□□ -1.04
UBDP1-202ENST00000457888 IGHA1P01876 353 aa8.53□□□□□ -1.04
UBDP1-202ENST00000457888 CTSOP43234 321 aaPredicted RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 MARSP56192 900 aaKnown RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 CDV3Q9UKY7 258 aaKnown RBP8.53□□□□□ -1.04
UBDP1-202ENST00000457888 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
UBDP1-202ENST00000457888 KANK3Q6NY19 840 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 ARHGAP9Q9BRR9 750 aa8.52□□□□□ -1.05
UBDP1-202ENST00000457888 RELBQ01201 579 aa8.51□□□□□ -1.05
UBDP1-202ENST00000457888 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
UBDP1-202ENST00000457888 INSM2Q96T92 566 aaPredicted RBP8.51□□□□□ -1.05
UBDP1-202ENST00000457888 SCARF2Q96GP6 870 aaPredicted RBP8.5□□□□□ -1.05
UBDP1-202ENST00000457888 POLMQ9NP87 494 aaPredicted RBP8.5□□□□□ -1.05
UBDP1-202ENST00000457888 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
UBDP1-202ENST00000457888 FOXK2Q01167 660 aa8.49□□□□□ -1.05
UBDP1-202ENST00000457888 INTS6LQ5JSJ4 861 aaKnown RBP8.49□□□□□ -1.05
UBDP1-202ENST00000457888 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 ZBTB33Q86T24 672 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 FKBPLQ9UIM3 349 aa8.48□□□□□ -1.05
UBDP1-202ENST00000457888 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
UBDP1-202ENST00000457888 PDE4DQ08499 809 aa8.47□□□□□ -1.05
UBDP1-202ENST00000457888 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
UBDP1-202ENST00000457888 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.06
UBDP1-202ENST00000457888 ZNF395Q9H8N7 513 aaPredicted RBP8.46□□□□□ -1.06
UBDP1-202ENST00000457888 SRSF11Q05519 484 aaKnown RBP8.45□□□□□ -1.06
UBDP1-202ENST00000457888 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
UBDP1-202ENST00000457888 ZC3H4Q9UPT8 1303 aaKnown RBP8.45□□□□□ -1.06
UBDP1-202ENST00000457888 LRRN4Q8WUT4 740 aa8.44□□□□□ -1.06
UBDP1-202ENST00000457888 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
UBDP1-202ENST00000457888 CELA2BP08218 269 aaPredicted RBP8.43□□□□□ -1.06
UBDP1-202ENST00000457888 PTK2Q05397 1052 aa8.43□□□□□ -1.06
UBDP1-202ENST00000457888 TMPRSS4Q9NRS4 437 aa8.43□□□□□ -1.06
UBDP1-202ENST00000457888 ADH1AP07327 375 aa8.42□□□□□ -1.06
UBDP1-202ENST00000457888 GAS6Q14393 721 aa8.42□□□□□ -1.06
UBDP1-202ENST00000457888 FOXD4L5Q5VV16 416 aaPredicted RBP8.42□□□□□ -1.06
UBDP1-202ENST00000457888 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
UBDP1-202ENST00000457888 NR6A1Q15406 480 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 ZNF784Q8NCA9 323 aaPredicted RBP8.41□□□□□ -1.06
UBDP1-202ENST00000457888 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 CUEDC1Q9NWM3 386 aaPredicted RBP8.41□□□□□ -1.06
UBDP1-202ENST00000457888 GPSM3Q9Y4H4 160 aa8.41□□□□□ -1.06
UBDP1-202ENST00000457888 PTGIRP43119 386 aa8.4□□□□□ -1.06
UBDP1-202ENST00000457888 LYSMD3Q7Z3D4 306 aa8.4□□□□□ -1.06
UBDP1-202ENST00000457888 LILRA1O75019 489 aa8.39□□□□□ -1.07
UBDP1-202ENST00000457888 RAB15P59190 212 aa8.39□□□□□ -1.07
UBDP1-202ENST00000457888 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
UBDP1-202ENST00000457888 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
UBDP1-202ENST00000457888 KDF1Q8NAX2 398 aaPredicted RBP8.38□□□□□ -1.07
UBDP1-202ENST00000457888 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
UBDP1-202ENST00000457888 PLA2G4EQ3MJ16 856 aa8.37□□□□□ -1.07
UBDP1-202ENST00000457888 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
UBDP1-202ENST00000457888 MSTNO14793 375 aa8.36□□□□□ -1.07
UBDP1-202ENST00000457888 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
UBDP1-202ENST00000457888 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
UBDP1-202ENST00000457888 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 RNF144AP50876 292 aaPredicted RBP8.35□□□□□ -1.07
UBDP1-202ENST00000457888 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 DZIP3Q86Y13 1208 aaKnown RBP8.35□□□□□ -1.07
UBDP1-202ENST00000457888 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
UBDP1-202ENST00000457888 ESPNB1AK53 854 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms