RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
ATG4A-206ENST00000457035 SLIT2O94813 1529 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 CPDO75976 1380 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 OVOS2A0A0J9YW53 1432 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 ATRNO75882 1429 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 OVOS2Q6IE36 1432 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
ATG4A-206ENST00000457035 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
ATG4A-206ENST00000457035 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
ATG4A-206ENST00000457035 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
ATG4A-206ENST00000457035 ARHGEF25Q86VW2 580 aa13.84□□□□□ -0.19
ATG4A-206ENST00000457035 COG3Q96JB2 828 aa13.84□□□□□ -0.19
ATG4A-206ENST00000457035 PRDM11Q9NQV5 511 aa13.84□□□□□ -0.19
ATG4A-206ENST00000457035 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
ATG4A-206ENST00000457035 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.2
ATG4A-206ENST00000457035 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
ATG4A-206ENST00000457035 COL14A1Q05707 1796 aaKnown RBP13.83□□□□□ -0.2
ATG4A-206ENST00000457035 NWD2Q9ULI1 1742 aa13.82□□□□□ -0.2
ATG4A-206ENST00000457035 COL18A1P39060 1754 aa13.82□□□□□ -0.2
ATG4A-206ENST00000457035 NFAT5O94916 1531 aa13.82□□□□□ -0.2
ATG4A-206ENST00000457035 SOX12O15370 315 aa13.82□□□□□ -0.2
ATG4A-206ENST00000457035 FBLN1P23142 703 aa13.82□□□□□ -0.2
ATG4A-206ENST00000457035 BTG4Q9NY30 223 aa13.82□□□□□ -0.2
ATG4A-206ENST00000457035 RGPD5Q99666 1765 aa13.81□□□□□ -0.2
ATG4A-206ENST00000457035 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
ATG4A-206ENST00000457035 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
ATG4A-206ENST00000457035 GLI3P10071 1580 aa13.8□□□□□ -0.2
ATG4A-206ENST00000457035 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
ATG4A-206ENST00000457035 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
ATG4A-206ENST00000457035 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
ATG4A-206ENST00000457035 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
ATG4A-206ENST00000457035 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
ATG4A-206ENST00000457035 LTN1O94822 1766 aa13.79□□□□□ -0.2
ATG4A-206ENST00000457035 VPS72Q15906 364 aa13.78□□□□□ -0.2
ATG4A-206ENST00000457035 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
ATG4A-206ENST00000457035 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
ATG4A-206ENST00000457035 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
ATG4A-206ENST00000457035 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
ATG4A-206ENST00000457035 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
ATG4A-206ENST00000457035 NSD2O96028 1365 aa13.76□□□□□ -0.21
ATG4A-206ENST00000457035 MAP3K19Q56UN5 1328 aa13.76□□□□□ -0.21
ATG4A-206ENST00000457035 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
ATG4A-206ENST00000457035 EP400Q96L91 3159 aa13.75□□□□□ -0.21
ATG4A-206ENST00000457035 EVA1CP58658 441 aa13.75□□□□□ -0.21
ATG4A-206ENST00000457035 IP6K1Q92551 441 aa13.75□□□□□ -0.21
ATG4A-206ENST00000457035 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
ATG4A-206ENST00000457035 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
ATG4A-206ENST00000457035 LARP1Q6PKG0 1096 aaKnown RBP13.74□□□□□ -0.21
ATG4A-206ENST00000457035 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
ATG4A-206ENST00000457035 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
ATG4A-206ENST00000457035 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
ATG4A-206ENST00000457035 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
ATG4A-206ENST00000457035 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
ATG4A-206ENST00000457035 HOXC9P31274 260 aa13.73□□□□□ -0.21
ATG4A-206ENST00000457035 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
ATG4A-206ENST00000457035 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
ATG4A-206ENST00000457035 POLKQ9UBT6 870 aa13.73□□□□□ -0.21
ATG4A-206ENST00000457035 ABCC6O95255 1503 aa13.73□□□□□ -0.21
ATG4A-206ENST00000457035 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
ATG4A-206ENST00000457035 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
ATG4A-206ENST00000457035 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
ATG4A-206ENST00000457035 AMPHP49418 695 aa13.72□□□□□ -0.21
ATG4A-206ENST00000457035 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
ATG4A-206ENST00000457035 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
ATG4A-206ENST00000457035 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
ATG4A-206ENST00000457035 EMILIN1Q9Y6C2 1016 aa13.72□□□□□ -0.21
ATG4A-206ENST00000457035 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
ATG4A-206ENST00000457035 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
ATG4A-206ENST00000457035 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
ATG4A-206ENST00000457035 HSP90AB2PQ58FF8 381 aa13.7□□□□□ -0.22
ATG4A-206ENST00000457035 ANKRD24Q8TF21 1146 aa13.7□□□□□ -0.22
ATG4A-206ENST00000457035 KIF24Q5T7B8 1368 aa13.7□□□□□ -0.22
ATG4A-206ENST00000457035 ERBB3P21860 1342 aa13.69□□□□□ -0.22
ATG4A-206ENST00000457035 CCDC125Q86Z20 511 aa13.69□□□□□ -0.22
ATG4A-206ENST00000457035 BLMP54132 1417 aaPredicted RBP13.69□□□□□ -0.22
ATG4A-206ENST00000457035 CRB1P82279 1406 aa13.69□□□□□ -0.22
ATG4A-206ENST00000457035 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
ATG4A-206ENST00000457035 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 TOM1L2Q6ZVM7 507 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 SEPT12Q8IYM1 358 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 TCP11L2Q8N4U5 519 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 THRAP3Q9Y2W1 955 aaKnown RBP13.68□□□□□ -0.22
ATG4A-206ENST00000457035 INSRP06213 1382 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 FLT4P35916 1363 aa13.68□□□□□ -0.22
ATG4A-206ENST00000457035 A0A0G2JS52 829 aa13.67□□□□□ -0.22
ATG4A-206ENST00000457035 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
ATG4A-206ENST00000457035 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
ATG4A-206ENST00000457035 MYT1Q01538 1121 aa13.67□□□□□ -0.22
ATG4A-206ENST00000457035 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
ATG4A-206ENST00000457035 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
ATG4A-206ENST00000457035 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
ATG4A-206ENST00000457035 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
ATG4A-206ENST00000457035 MTHFSP49914 203 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms