RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 ZBTB7CA1YPR0 619 aa19.22■□□□□ 0.67
SNHG17-208ENST00000456953 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
SNHG17-208ENST00000456953 STK32BQ9NY57 414 aa19.22■□□□□ 0.67
SNHG17-208ENST00000456953 ATF5Q9Y2D1 282 aaPredicted RBP19.22■□□□□ 0.67
SNHG17-208ENST00000456953 SLIT3O75094 1523 aa19.21■□□□□ 0.67
SNHG17-208ENST00000456953 SRPK2P78362 688 aaKnown RBP19.21■□□□□ 0.67
SNHG17-208ENST00000456953 SYT17Q9BSW7 474 aa19.21■□□□□ 0.67
SNHG17-208ENST00000456953 FHDC1Q9C0D6 1143 aaPredicted RBP19.21■□□□□ 0.67
SNHG17-208ENST00000456953 WNK3Q9BYP7 1800 aa19.21■□□□□ 0.67
SNHG17-208ENST00000456953 GOLGB1Q14789 3259 aaKnown RBP19.2■□□□□ 0.66
SNHG17-208ENST00000456953 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
SNHG17-208ENST00000456953 NLRP6P59044 892 aa19.2■□□□□ 0.66
SNHG17-208ENST00000456953 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
SNHG17-208ENST00000456953 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
SNHG17-208ENST00000456953 KIAA1210Q9ULL0 1709 aa19.2■□□□□ 0.66
SNHG17-208ENST00000456953 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
SNHG17-208ENST00000456953 SLC15A2Q16348 729 aa19.19■□□□□ 0.66
SNHG17-208ENST00000456953 MTFR1LQ9H019 292 aa19.19■□□□□ 0.66
SNHG17-208ENST00000456953 CHD4Q14839 1912 aa19.19■□□□□ 0.66
SNHG17-208ENST00000456953 CEP350Q5VT06 3117 aa19.18■□□□□ 0.66
SNHG17-208ENST00000456953 USP6P35125 1406 aa19.18■□□□□ 0.66
SNHG17-208ENST00000456953 COL18A1P39060 1754 aa19.18■□□□□ 0.66
SNHG17-208ENST00000456953 C1QTNF8P60827 252 aa19.17■□□□□ 0.66
SNHG17-208ENST00000456953 SGIP1Q9BQI5 828 aa19.17■□□□□ 0.66
SNHG17-208ENST00000456953 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
SNHG17-208ENST00000456953 AXIN2Q9Y2T1 843 aa19.16■□□□□ 0.66
SNHG17-208ENST00000456953 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
SNHG17-208ENST00000456953 CARD10Q9BWT7 1032 aa19.14■□□□□ 0.65
SNHG17-208ENST00000456953 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
SNHG17-208ENST00000456953 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
SNHG17-208ENST00000456953 PIK3C2AO00443 1686 aa19.14■□□□□ 0.65
SNHG17-208ENST00000456953 EXOC5O00471 708 aa19.13■□□□□ 0.65
SNHG17-208ENST00000456953 ARXQ96QS3 562 aa19.13■□□□□ 0.65
SNHG17-208ENST00000456953 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
SNHG17-208ENST00000456953 ARHGEF25Q86VW2 580 aa19.12■□□□□ 0.65
SNHG17-208ENST00000456953 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
SNHG17-208ENST00000456953 NBPF1Q3BBV0 1214 aa19.11■□□□□ 0.65
SNHG17-208ENST00000456953 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
SNHG17-208ENST00000456953 KCNH5Q8NCM2 988 aa19.1■□□□□ 0.65
SNHG17-208ENST00000456953 TNS2Q63HR2 1409 aa19.09■□□□□ 0.65
SNHG17-208ENST00000456953 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
SNHG17-208ENST00000456953 NHSQ6T4R5 1651 aa19.09■□□□□ 0.65
SNHG17-208ENST00000456953 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.65
SNHG17-208ENST00000456953 RGPD5Q99666 1765 aa19.08■□□□□ 0.64
SNHG17-208ENST00000456953 PAPPAQ13219 1627 aa19.07■□□□□ 0.64
SNHG17-208ENST00000456953 ABCC6O95255 1503 aa19.06■□□□□ 0.64
SNHG17-208ENST00000456953 GPR162Q16538 588 aa19.05■□□□□ 0.64
SNHG17-208ENST00000456953 IFFO2Q5TF58 517 aa19.05■□□□□ 0.64
SNHG17-208ENST00000456953 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
SNHG17-208ENST00000456953 SOX12O15370 315 aa19.04■□□□□ 0.64
SNHG17-208ENST00000456953 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
SNHG17-208ENST00000456953 NFAT5O94916 1531 aa19.04■□□□□ 0.64
SNHG17-208ENST00000456953 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
SNHG17-208ENST00000456953 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
SNHG17-208ENST00000456953 TTC21AQ8NDW8 1320 aa19.02■□□□□ 0.64
SNHG17-208ENST00000456953 ACSBG1Q96GR2 724 aa19.02■□□□□ 0.64
SNHG17-208ENST00000456953 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
SNHG17-208ENST00000456953 BTAF1O14981 1849 aa19■□□□□ 0.63
SNHG17-208ENST00000456953 SLC16A10Q8TF71 515 aa19■□□□□ 0.63
SNHG17-208ENST00000456953 POLD1P28340 1107 aa18.98■□□□□ 0.63
SNHG17-208ENST00000456953 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
SNHG17-208ENST00000456953 ERBB3P21860 1342 aa18.98■□□□□ 0.63
SNHG17-208ENST00000456953 IL2RBP14784 551 aa18.97■□□□□ 0.63
SNHG17-208ENST00000456953 AKT1S1Q96B36 256 aa18.97■□□□□ 0.63
SNHG17-208ENST00000456953 NLRP2Q9NX02 1062 aa18.97■□□□□ 0.63
SNHG17-208ENST00000456953 QSER1Q2KHR3 1735 aa18.97■□□□□ 0.63
SNHG17-208ENST00000456953 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
SNHG17-208ENST00000456953 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
SNHG17-208ENST00000456953 COL24A1Q17RW2 1714 aa18.96■□□□□ 0.63
SNHG17-208ENST00000456953 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
SNHG17-208ENST00000456953 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
SNHG17-208ENST00000456953 SHANK3Q9BYB0 1731 aa18.94■□□□□ 0.62
SNHG17-208ENST00000456953 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
SNHG17-208ENST00000456953 PNPLA7Q6ZV29 1317 aa18.92■□□□□ 0.62
SNHG17-208ENST00000456953 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
SNHG17-208ENST00000456953 NLGN2Q8NFZ4 835 aa18.91■□□□□ 0.62
SNHG17-208ENST00000456953 TFCP2L1Q9NZI6 479 aa18.91■□□□□ 0.62
SNHG17-208ENST00000456953 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
SNHG17-208ENST00000456953 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
SNHG17-208ENST00000456953 GRIN3BO60391 1043 aa18.9■□□□□ 0.62
SNHG17-208ENST00000456953 ANKRD24Q8TF21 1146 aa18.9■□□□□ 0.62
SNHG17-208ENST00000456953 LTN1O94822 1766 aa18.89■□□□□ 0.61
SNHG17-208ENST00000456953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.88■□□□□ 0.617e-6■■□□□ 11.5
SNHG17-208ENST00000456953 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
SNHG17-208ENST00000456953 YBX3P16989 372 aaKnown RBP eCLIP18.86■□□□□ 0.61
SNHG17-208ENST00000456953 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
SNHG17-208ENST00000456953 NME9Q86XW9 330 aa18.85■□□□□ 0.61
SNHG17-208ENST00000456953 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
SNHG17-208ENST00000456953 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
SNHG17-208ENST00000456953 ATP10DQ9P241 1426 aa18.83■□□□□ 0.61
SNHG17-208ENST00000456953 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.61
SNHG17-208ENST00000456953 ANKRD36BQ8N2N9 1353 aa18.83■□□□□ 0.61
SNHG17-208ENST00000456953 KCNQ4P56696 695 aa18.83■□□□□ 0.6
SNHG17-208ENST00000456953 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.6
SNHG17-208ENST00000456953 LY75O60449 1722 aa18.83■□□□□ 0.6
SNHG17-208ENST00000456953 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
SNHG17-208ENST00000456953 PRIM1P49642 420 aaKnown RBP18.82■□□□□ 0.6
SNHG17-208ENST00000456953 CD163L1Q9NR16 1453 aa18.81■□□□□ 0.6
SNHG17-208ENST00000456953 NSD2O96028 1365 aa18.81■□□□□ 0.6
SNHG17-208ENST00000456953 DOT1LQ8TEK3 1739 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms