RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 MORC1Q86VD1 984 aa23.31■■□□□ 1.32
PMPCB-206ENST00000456433 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
PMPCB-206ENST00000456433 RGPD5Q99666 1765 aa23.3■■□□□ 1.32
PMPCB-206ENST00000456433 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
PMPCB-206ENST00000456433 FBLN1P23142 703 aa23.29■■□□□ 1.32
PMPCB-206ENST00000456433 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
PMPCB-206ENST00000456433 PEAK1Q9H792 1746 aa23.28■■□□□ 1.32
PMPCB-206ENST00000456433 CC2D1BQ5T0F9 858 aaKnown RBP23.28■■□□□ 1.32
PMPCB-206ENST00000456433 IP6K1Q92551 441 aa23.28■■□□□ 1.32
PMPCB-206ENST00000456433 AXIN2Q9Y2T1 843 aa23.28■■□□□ 1.32
PMPCB-206ENST00000456433 RRS1Q15050 365 aaKnown RBP23.27■■□□□ 1.32
PMPCB-206ENST00000456433 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
PMPCB-206ENST00000456433 FLT4P35916 1363 aa23.27■■□□□ 1.31
PMPCB-206ENST00000456433 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
PMPCB-206ENST00000456433 VPS72Q15906 364 aa23.26■■□□□ 1.31
PMPCB-206ENST00000456433 HOXC9P31274 260 aa23.25■■□□□ 1.31
PMPCB-206ENST00000456433 POLKQ9UBT6 870 aa23.25■■□□□ 1.31
PMPCB-206ENST00000456433 AMPHP49418 695 aa23.24■■□□□ 1.31
PMPCB-206ENST00000456433 POTEAQ6S8J7 498 aa23.24■■□□□ 1.31
PMPCB-206ENST00000456433 QTRT2Q9H974 415 aaKnown RBP23.24■■□□□ 1.31
PMPCB-206ENST00000456433 FAM208AQ9UK61 1670 aaKnown RBP23.23■■□□□ 1.31
PMPCB-206ENST00000456433 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
PMPCB-206ENST00000456433 ERBB3P21860 1342 aa23.23■■□□□ 1.31
PMPCB-206ENST00000456433 TNNT2P45379 298 aaPredicted RBP23.22■■□□□ 1.31
PMPCB-206ENST00000456433 WDR17Q8IZU2 1322 aa23.22■■□□□ 1.31
PMPCB-206ENST00000456433 INSRP06213 1382 aa23.22■■□□□ 1.31
PMPCB-206ENST00000456433 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
PMPCB-206ENST00000456433 CDK12Q9NYV4 1490 aaPredicted RBP23.22■■□□□ 1.31
PMPCB-206ENST00000456433 GLI3P10071 1580 aa23.22■■□□□ 1.31
PMPCB-206ENST00000456433 CRB1P82279 1406 aa23.2■■□□□ 1.3
PMPCB-206ENST00000456433 SPATA31A5Q5VU36 1347 aa23.2■■□□□ 1.3
PMPCB-206ENST00000456433 SPATA31A7Q8IWB4 1347 aa23.2■■□□□ 1.3
PMPCB-206ENST00000456433 EVA1CP58658 441 aa23.2■■□□□ 1.3
PMPCB-206ENST00000456433 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
PMPCB-206ENST00000456433 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
PMPCB-206ENST00000456433 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
PMPCB-206ENST00000456433 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
PMPCB-206ENST00000456433 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
PMPCB-206ENST00000456433 SOCS7O14512 581 aa23.17■■□□□ 1.3
PMPCB-206ENST00000456433 HSP90AB2PQ58FF8 381 aa23.17■■□□□ 1.3
PMPCB-206ENST00000456433 ANKRD24Q8TF21 1146 aa23.17■■□□□ 1.3
PMPCB-206ENST00000456433 RXRBP28702 533 aa23.16■■□□□ 1.3
PMPCB-206ENST00000456433 RALBP1Q15311 655 aa23.15■■□□□ 1.3
PMPCB-206ENST00000456433 PPM1GO15355 546 aaPredicted RBP23.14■■□□□ 1.29
PMPCB-206ENST00000456433 CARD10Q9BWT7 1032 aa23.14■■□□□ 1.29
PMPCB-206ENST00000456433 THRAP3Q9Y2W1 955 aaKnown RBP23.14■■□□□ 1.29
PMPCB-206ENST00000456433 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
PMPCB-206ENST00000456433 CSB-PGBD3P0DP91 1061 aa23.13■■□□□ 1.29
PMPCB-206ENST00000456433 MTHFSP49914 203 aa23.13■■□□□ 1.29
PMPCB-206ENST00000456433 TOM1L2Q6ZVM7 507 aa23.13■■□□□ 1.29
PMPCB-206ENST00000456433 CCDC9Q9Y3X0 531 aaKnown RBP23.13■■□□□ 1.29
PMPCB-206ENST00000456433 WNK3Q9BYP7 1800 aa23.12■■□□□ 1.29
PMPCB-206ENST00000456433 RGPD2P0DJD1 1756 aa23.12■■□□□ 1.29
PMPCB-206ENST00000456433 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
PMPCB-206ENST00000456433 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
PMPCB-206ENST00000456433 BARGINQ6ZT62 677 aa23.12■■□□□ 1.29
PMPCB-206ENST00000456433 TCP11L2Q8N4U5 519 aa23.12■■□□□ 1.29
PMPCB-206ENST00000456433 THSD7AQ9UPZ6 1657 aa23.12■■□□□ 1.29
PMPCB-206ENST00000456433 NCAPD2Q15021 1401 aa23.1■■□□□ 1.29
PMPCB-206ENST00000456433 COL3A1P02461 1466 aaPredicted RBP23.1■■□□□ 1.29
PMPCB-206ENST00000456433 LTV1Q96GA3 475 aaPredicted RBP23.09■■□□□ 1.29
PMPCB-206ENST00000456433 RGS12O14924 1447 aa23.08■■□□□ 1.29
PMPCB-206ENST00000456433 EIF4A2Q14240 407 aaKnown RBP23.08■■□□□ 1.29
PMPCB-206ENST00000456433 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.29
PMPCB-206ENST00000456433 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
PMPCB-206ENST00000456433 DISP2A7MBM2 1401 aa23.08■■□□□ 1.28
PMPCB-206ENST00000456433 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
PMPCB-206ENST00000456433 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
PMPCB-206ENST00000456433 NBPF6Q5VWK0 638 aa23.06■■□□□ 1.28
PMPCB-206ENST00000456433 NBPF4Q96M43 638 aa23.06■■□□□ 1.28
PMPCB-206ENST00000456433 USP35Q9P2H5 1018 aa23.06■■□□□ 1.28
PMPCB-206ENST00000456433 FAM98CQ17RN3 349 aaKnown RBP23.05■■□□□ 1.28
PMPCB-206ENST00000456433 CDCA7Q9BWT1 371 aaPredicted RBP23.05■■□□□ 1.28
PMPCB-206ENST00000456433 MYBBP1AQ9BQG0 1328 aaKnown RBP23.05■■□□□ 1.28
PMPCB-206ENST00000456433 IL13P35225 146 aa23.04■■□□□ 1.28
PMPCB-206ENST00000456433 EYA1Q99502 592 aa23.03■■□□□ 1.28
PMPCB-206ENST00000456433 IGSF1Q8N6C5 1336 aa23.03■■□□□ 1.28
PMPCB-206ENST00000456433 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
PMPCB-206ENST00000456433 BRWD3Q6RI45 1802 aa23.02■■□□□ 1.28
PMPCB-206ENST00000456433 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
PMPCB-206ENST00000456433 SEPT12Q8IYM1 358 aa23.01■■□□□ 1.27
PMPCB-206ENST00000456433 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
PMPCB-206ENST00000456433 LRRC37A3O60309 1634 aa23■■□□□ 1.27
PMPCB-206ENST00000456433 IL2RBP14784 551 aa22.99■■□□□ 1.27
PMPCB-206ENST00000456433 KDRP35968 1356 aa22.99■■□□□ 1.27
PMPCB-206ENST00000456433 MEGF6O75095 1541 aa22.98■■□□□ 1.27
PMPCB-206ENST00000456433 ANP32CO43423 234 aa22.97■■□□□ 1.27
PMPCB-206ENST00000456433 USHBP1Q8N6Y0 703 aa22.97■■□□□ 1.27
PMPCB-206ENST00000456433 TNS2Q63HR2 1409 aa22.97■■□□□ 1.27
PMPCB-206ENST00000456433 OVOS2A0A0G2JMS6 1433 aa22.96■■□□□ 1.27
PMPCB-206ENST00000456433 A0A0G2JS52 829 aa22.94■■□□□ 1.26
PMPCB-206ENST00000456433 MYT1Q01538 1121 aa22.94■■□□□ 1.26
PMPCB-206ENST00000456433 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
PMPCB-206ENST00000456433 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
PMPCB-206ENST00000456433 DDB1Q16531 1140 aa22.93■■□□□ 1.26
PMPCB-206ENST00000456433 NUDCQ9Y266 331 aa22.93■■□□□ 1.26
PMPCB-206ENST00000456433 EP400Q96L91 3159 aa22.93■■□□□ 1.26
PMPCB-206ENST00000456433 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
PMPCB-206ENST00000456433 TATP17735 454 aaPredicted RBP22.91■■□□□ 1.26
PMPCB-206ENST00000456433 KRT27Q7Z3Y8 459 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms