RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 AXIN2Q9Y2T1 843 aa19.4■□□□□ 0.7
LINC01563-201ENST00000456235 RBM6P78332 1123 aaKnown RBP19.39■□□□□ 0.69
LINC01563-201ENST00000456235 RRS1Q15050 365 aaKnown RBP19.39■□□□□ 0.69
LINC01563-201ENST00000456235 LARP1Q6PKG0 1096 aaKnown RBP19.39■□□□□ 0.69
LINC01563-201ENST00000456235 ARHGEF25Q86VW2 580 aa19.39■□□□□ 0.69
LINC01563-201ENST00000456235 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
LINC01563-201ENST00000456235 RGPD2P0DJD1 1756 aa19.39■□□□□ 0.69
LINC01563-201ENST00000456235 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
LINC01563-201ENST00000456235 VPS72Q15906 364 aa19.38■□□□□ 0.69
LINC01563-201ENST00000456235 WNK3Q9BYP7 1800 aa19.38■□□□□ 0.69
LINC01563-201ENST00000456235 AATKQ6ZMQ8 1374 aa19.37■□□□□ 0.69
LINC01563-201ENST00000456235 EVA1CP58658 441 aa19.37■□□□□ 0.69
LINC01563-201ENST00000456235 CGNL1Q0VF96 1302 aa19.36■□□□□ 0.69
LINC01563-201ENST00000456235 A0A0G2JS52 829 aa19.36■□□□□ 0.69
LINC01563-201ENST00000456235 MYT1Q01538 1121 aa19.36■□□□□ 0.69
LINC01563-201ENST00000456235 MAP2P11137 1827 aaKnown RBP19.35■□□□□ 0.69
LINC01563-201ENST00000456235 MAP3K19Q56UN5 1328 aa19.35■□□□□ 0.69
LINC01563-201ENST00000456235 FAM98CQ17RN3 349 aaKnown RBP19.35■□□□□ 0.69
LINC01563-201ENST00000456235 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
LINC01563-201ENST00000456235 LTV1Q96GA3 475 aaPredicted RBP19.34■□□□□ 0.69
LINC01563-201ENST00000456235 THSD7AQ9UPZ6 1657 aa19.33■□□□□ 0.69
LINC01563-201ENST00000456235 SPATA31A5Q5VU36 1347 aa19.33■□□□□ 0.69
LINC01563-201ENST00000456235 SPATA31A7Q8IWB4 1347 aa19.33■□□□□ 0.69
LINC01563-201ENST00000456235 CDK12Q9NYV4 1490 aaPredicted RBP19.33■□□□□ 0.68
LINC01563-201ENST00000456235 ABCC6O95255 1503 aa19.32■□□□□ 0.68
LINC01563-201ENST00000456235 CSB-PGBD3P0DP91 1061 aa19.32■□□□□ 0.68
LINC01563-201ENST00000456235 EMILIN1Q9Y6C2 1016 aa19.32■□□□□ 0.68
LINC01563-201ENST00000456235 SPATA31A1Q5TZJ5 1347 aa19.31■□□□□ 0.68
LINC01563-201ENST00000456235 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
LINC01563-201ENST00000456235 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
LINC01563-201ENST00000456235 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
LINC01563-201ENST00000456235 AMPHP49418 695 aa19.3■□□□□ 0.68
LINC01563-201ENST00000456235 TOM1L2Q6ZVM7 507 aa19.3■□□□□ 0.68
LINC01563-201ENST00000456235 CRB1P82279 1406 aa19.3■□□□□ 0.68
LINC01563-201ENST00000456235 SEPT12Q8IYM1 358 aa19.29■□□□□ 0.68
LINC01563-201ENST00000456235 ANKRD24Q8TF21 1146 aa19.29■□□□□ 0.68
LINC01563-201ENST00000456235 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
LINC01563-201ENST00000456235 HOXC9P31274 260 aa19.28■□□□□ 0.68
LINC01563-201ENST00000456235 WDR17Q8IZU2 1322 aa19.27■□□□□ 0.68
LINC01563-201ENST00000456235 FAM208AQ9UK61 1670 aaKnown RBP19.27■□□□□ 0.68
LINC01563-201ENST00000456235 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
LINC01563-201ENST00000456235 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
LINC01563-201ENST00000456235 ERBB3P21860 1342 aa19.26■□□□□ 0.67
LINC01563-201ENST00000456235 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
LINC01563-201ENST00000456235 MORC1Q86VD1 984 aa19.26■□□□□ 0.67
LINC01563-201ENST00000456235 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
LINC01563-201ENST00000456235 PARP4Q9UKK3 1724 aaKnown RBP19.25■□□□□ 0.67
LINC01563-201ENST00000456235 HSP90AB2PQ58FF8 381 aa19.25■□□□□ 0.67
LINC01563-201ENST00000456235 IP6K1Q92551 441 aa19.25■□□□□ 0.67
LINC01563-201ENST00000456235 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
LINC01563-201ENST00000456235 RTL1A6NKG5 1358 aa19.24■□□□□ 0.67
LINC01563-201ENST00000456235 NSD2O96028 1365 aa19.24■□□□□ 0.67
LINC01563-201ENST00000456235 SOCS7O14512 581 aa19.24■□□□□ 0.67
LINC01563-201ENST00000456235 TCP11L2Q8N4U5 519 aa19.24■□□□□ 0.67
LINC01563-201ENST00000456235 USHBP1Q8N6Y0 703 aa19.24■□□□□ 0.67
LINC01563-201ENST00000456235 FLT4P35916 1363 aa19.22■□□□□ 0.67
LINC01563-201ENST00000456235 POLKQ9UBT6 870 aa19.21■□□□□ 0.67
LINC01563-201ENST00000456235 DDX10Q13206 875 aaKnown RBP19.2■□□□□ 0.66
LINC01563-201ENST00000456235 EP400Q96L91 3159 aa19.2■□□□□ 0.66
LINC01563-201ENST00000456235 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
LINC01563-201ENST00000456235 ONECUT3O60422 494 aaPredicted RBP19.18■□□□□ 0.66
LINC01563-201ENST00000456235 KRT27Q7Z3Y8 459 aa19.18■□□□□ 0.66
LINC01563-201ENST00000456235 CARD10Q9BWT7 1032 aa19.18■□□□□ 0.66
LINC01563-201ENST00000456235 INSRP06213 1382 aa19.18■□□□□ 0.66
LINC01563-201ENST00000456235 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
LINC01563-201ENST00000456235 SHANK3Q9BYB0 1731 aa19.17■□□□□ 0.66
LINC01563-201ENST00000456235 BARGINQ6ZT62 677 aa19.17■□□□□ 0.66
LINC01563-201ENST00000456235 MEGF6O75095 1541 aa19.16■□□□□ 0.66
LINC01563-201ENST00000456235 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
LINC01563-201ENST00000456235 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
LINC01563-201ENST00000456235 THRAP3Q9Y2W1 955 aaKnown RBP19.14■□□□□ 0.65
LINC01563-201ENST00000456235 EIF4A2Q14240 407 aaKnown RBP19.13■□□□□ 0.65
LINC01563-201ENST00000456235 UPF1Q92900 1129 aaKnown RBP eCLIP19.13■□□□□ 0.65
LINC01563-201ENST00000456235 TNS1Q9HBL0 1735 aaKnown RBP19.12■□□□□ 0.65
LINC01563-201ENST00000456235 TNS2Q63HR2 1409 aa19.12■□□□□ 0.65
LINC01563-201ENST00000456235 KIF24Q5T7B8 1368 aa19.12■□□□□ 0.65
LINC01563-201ENST00000456235 DDB1Q16531 1140 aa19.12■□□□□ 0.65
LINC01563-201ENST00000456235 PDE3BQ13370 1112 aa19.11■□□□□ 0.65
LINC01563-201ENST00000456235 RGPD1P0DJD0 1748 aa19.11■□□□□ 0.65
LINC01563-201ENST00000456235 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
LINC01563-201ENST00000456235 SBF2Q86WG5 1849 aa19.1■□□□□ 0.65
LINC01563-201ENST00000456235 IL2RBP14784 551 aa19.1■□□□□ 0.65
LINC01563-201ENST00000456235 MTHFSP49914 203 aa19.1■□□□□ 0.65
LINC01563-201ENST00000456235 MARCH10Q8NA82 808 aaPredicted RBP19.08■□□□□ 0.64
LINC01563-201ENST00000456235 EYA1Q99502 592 aa19.08■□□□□ 0.64
LINC01563-201ENST00000456235 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.64
LINC01563-201ENST00000456235 ZNF316A6NFI3 1004 aaPredicted RBP19.07■□□□□ 0.64
LINC01563-201ENST00000456235 DOT1LQ8TEK3 1739 aa19.07■□□□□ 0.64
LINC01563-201ENST00000456235 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
LINC01563-201ENST00000456235 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
LINC01563-201ENST00000456235 AEBP1Q8IUX7 1158 aa19.05■□□□□ 0.64
LINC01563-201ENST00000456235 EXOC5O00471 708 aa19.04■□□□□ 0.64
LINC01563-201ENST00000456235 TRIM37O94972 964 aa19.04■□□□□ 0.64
LINC01563-201ENST00000456235 PPP2R1AP30153 589 aa19.04■□□□□ 0.64
LINC01563-201ENST00000456235 PTF1AQ7RTS3 328 aa19.04■□□□□ 0.64
LINC01563-201ENST00000456235 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
LINC01563-201ENST00000456235 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
LINC01563-201ENST00000456235 NCAPD2Q15021 1401 aa19.03■□□□□ 0.64
LINC01563-201ENST00000456235 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
LINC01563-201ENST00000456235 IL13P35225 146 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms